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    • Core-Docs

      Public
      UCGD Docusaurus Documentation Website
      Perl
      1000Updated Oct 8, 2024Oct 8, 2024
    • bgzfast

      Public
      BGZFast is a toolkit for paralelized manipulation of BGZF files
      C
      0000Updated Feb 27, 2024Feb 27, 2024
    • UCGD Nextflow implementation of STRling data flow
      Nextflow
      MIT License
      2000Updated Oct 17, 2023Oct 17, 2023
    • GAL

      Public
      Genome Annotation Library - A perl toolkit for working with SO compliant genome annotations
      Perl
      Other
      15000Updated Dec 14, 2022Dec 14, 2022
    • samblaster: a tool to mark duplicates and extract discordant and split reads from sam files.
      C++
      MIT License
      30000Updated Aug 11, 2021Aug 11, 2021
    • A registry of publicly available datasets on AWS
      Python
      Apache License 2.0
      917000Updated Jul 6, 2020Jul 6, 2020
    • This is a walkthrough of the PFB2018 course taught at CSHL.
      Python
      2200Updated May 20, 2019May 20, 2019