From c40628f1e2605e0e3a224245c617d03156e64c8f Mon Sep 17 00:00:00 2001 From: Ivan Ogasawara Date: Sun, 3 Dec 2023 12:37:38 -0400 Subject: [PATCH 1/8] fix: Fix profile's mechanism and update OSL profile --- .pre-commit-config.yaml | 29 +- conda/dev.yaml | 6 +- poetry.lock | 2191 ++++++++++++++++-------------- pyproject.toml | 31 +- src/scicookie/cli.py | 3 +- src/scicookie/logs.py | 1 + src/scicookie/profiles/base.yaml | 60 +- src/scicookie/profiles/osl.yaml | 91 +- src/scicookie/ui.py | 7 +- 9 files changed, 1279 insertions(+), 1140 deletions(-) diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index 4861d713..12a5f333 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -10,14 +10,6 @@ repos: - repo: local hooks: - - id: black - entry: black - name: black - language: system - pass_filenames: true - types: - - python - - id: mypy name: mypy entry: mypy @@ -33,9 +25,24 @@ repos: types: - python - - id: ruff - name: ruff - entry: ruff --no-cache --fix + - id: ruff format + name: ruff format + entry: ruff format + language: system + pass_filenames: true + files: "./" + # pre-commit + ruff doesn't honor the exclusion defined in the config + exclude: | + (?x)( + src/scicookie/{{cookiecutter.project_slug}} + | src/scicookie/hooks + ) + types: + - python + + - id: ruff check + name: ruff check + entry: ruff check language: system pass_filenames: true files: "./" diff --git a/conda/dev.yaml b/conda/dev.yaml index 7ecb38ac..5811fed6 100644 --- a/conda/dev.yaml +++ b/conda/dev.yaml @@ -4,10 +4,10 @@ channels: - conda-forge dependencies: - git - - python <3.11 - - poetry + - python >=3.8.1,<3.12 + - poetry >=1.5 - nodejs - compilers - pip - pip: - - makim==1.8.2 + - makim==1.8.3 diff --git a/poetry.lock b/poetry.lock index fab9e71a..044a3537 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,4 +1,4 @@ -# This file is automatically @generated by Poetry 1.5.1 and should not be changed by hand. +# This file is automatically @generated by Poetry 1.7.1 and should not be changed by hand. [[package]] name = "accessible-pygments" @@ -38,24 +38,24 @@ files = [ [[package]] name = "anyio" -version = "3.7.1" +version = "4.1.0" description = "High level compatibility layer for multiple asynchronous event loop implementations" optional = false -python-versions = ">=3.7" +python-versions = ">=3.8" files = [ - {file = "anyio-3.7.1-py3-none-any.whl", hash = "sha256:91dee416e570e92c64041bd18b900d1d6fa78dff7048769ce5ac5ddad004fbb5"}, - {file = "anyio-3.7.1.tar.gz", hash = "sha256:44a3c9aba0f5defa43261a8b3efb97891f2bd7d804e0e1f56419befa1adfc780"}, + {file = "anyio-4.1.0-py3-none-any.whl", hash = "sha256:56a415fbc462291813a94528a779597226619c8e78af7de0507333f700011e5f"}, + {file = "anyio-4.1.0.tar.gz", hash = "sha256:5a0bec7085176715be77df87fc66d6c9d70626bd752fcc85f57cdbee5b3760da"}, ] [package.dependencies] -exceptiongroup = {version = "*", markers = "python_version < \"3.11\""} +exceptiongroup = {version = ">=1.0.2", markers = "python_version < \"3.11\""} idna = ">=2.8" sniffio = 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"pyOpenSSL (>=0.14)", "urllib3-secure-extra"] -socks = ["PySocks (>=1.5.6,!=1.5.7,<2.0)"] +brotli = ["brotli (>=1.0.9)", "brotlicffi (>=0.8.0)"] +socks = ["pysocks (>=1.5.6,!=1.5.7,<2.0)"] +zstd = ["zstandard (>=0.18.0)"] [[package]] name = "virtualenv" -version = "20.24.2" +version = "20.25.0" description = "Virtual Python Environment builder" optional = false python-versions = ">=3.7" files = [ - {file = "virtualenv-20.24.2-py3-none-any.whl", hash = "sha256:43a3052be36080548bdee0b42919c88072037d50d56c28bd3f853cbe92b953ff"}, - {file = "virtualenv-20.24.2.tar.gz", hash = "sha256:fd8a78f46f6b99a67b7ec5cf73f92357891a7b3a40fd97637c27f854aae3b9e0"}, + {file = "virtualenv-20.25.0-py3-none-any.whl", hash = "sha256:4238949c5ffe6876362d9c0180fc6c3a824a7b12b80604eeb8085f2ed7460de3"}, + {file = "virtualenv-20.25.0.tar.gz", hash = "sha256:bf51c0d9c7dd63ea8e44086fa1e4fb1093a31e963b86959257378aef020e1f1b"}, ] [package.dependencies] distlib = ">=0.3.7,<1" filelock = ">=3.12.2,<4" -platformdirs = ">=3.9.1,<4" +platformdirs = ">=3.9.1,<5" [package.extras] -docs = ["furo (>=2023.5.20)", "proselint (>=0.13)", "sphinx (>=7.0.1)", "sphinx-argparse (>=0.4)", "sphinxcontrib-towncrier (>=0.2.1a0)", "towncrier (>=23.6)"] +docs = ["furo (>=2023.7.26)", "proselint (>=0.13)", "sphinx (>=7.1.2)", "sphinx-argparse (>=0.4)", "sphinxcontrib-towncrier (>=0.2.1a0)", "towncrier (>=23.6)"] test = ["covdefaults (>=2.3)", "coverage (>=7.2.7)", "coverage-enable-subprocess (>=1)", "flaky (>=3.7)", "packaging (>=23.1)", "pytest (>=7.4)", "pytest-env (>=0.8.2)", "pytest-freezer (>=0.4.8)", "pytest-mock (>=3.11.1)", "pytest-randomly (>=3.12)", "pytest-timeout (>=2.1)", "setuptools (>=68)", "time-machine (>=2.10)"] [[package]] name = "wcwidth" -version = "0.2.6" +version = "0.2.12" description = "Measures the displayed width of unicode strings in a terminal" optional = false python-versions = "*" files = [ - {file = "wcwidth-0.2.6-py2.py3-none-any.whl", hash = "sha256:795b138f6875577cd91bba52baf9e445cd5118fd32723b460e30a0af30ea230e"}, - {file = "wcwidth-0.2.6.tar.gz", hash = "sha256:a5220780a404dbe3353789870978e472cfe477761f06ee55077256e509b156d0"}, + {file = "wcwidth-0.2.12-py2.py3-none-any.whl", hash = "sha256:f26ec43d96c8cbfed76a5075dac87680124fa84e0855195a6184da9c187f133c"}, + {file = "wcwidth-0.2.12.tar.gz", hash = "sha256:f01c104efdf57971bcb756f054dd58ddec5204dd15fa31d6503ea57947d97c02"}, ] +[[package]] +name = "webcolors" +version = "1.13" +description = "A library for working with the color formats defined by HTML and CSS." +optional = false +python-versions = ">=3.7" +files = [ + {file = "webcolors-1.13-py3-none-any.whl", hash = "sha256:29bc7e8752c0a1bd4a1f03c14d6e6a72e93d82193738fa860cbff59d0fcc11bf"}, + {file = "webcolors-1.13.tar.gz", hash = "sha256:c225b674c83fa923be93d235330ce0300373d02885cef23238813b0d5668304a"}, +] + +[package.extras] +docs = ["furo", "sphinx", "sphinx-copybutton", "sphinx-inline-tabs", "sphinx-notfound-page", "sphinxext-opengraph"] +tests = ["pytest", "pytest-cov"] + [[package]] name = "webencodings" version = "0.5.1" @@ -3381,29 +3476,29 @@ files = [ [[package]] name = "websocket-client" -version = "1.6.1" +version = "1.7.0" description = "WebSocket client for Python with low level API options" optional = false -python-versions = ">=3.7" +python-versions = ">=3.8" files = [ - {file = "websocket-client-1.6.1.tar.gz", hash = "sha256:c951af98631d24f8df89ab1019fc365f2227c0892f12fd150e935607c79dd0dd"}, - {file = "websocket_client-1.6.1-py3-none-any.whl", hash = "sha256:f1f9f2ad5291f0225a49efad77abf9e700b6fef553900623060dad6e26503b9d"}, + {file = "websocket-client-1.7.0.tar.gz", hash = "sha256:10e511ea3a8c744631d3bd77e61eb17ed09304c413ad42cf6ddfa4c7787e8fe6"}, + {file = "websocket_client-1.7.0-py3-none-any.whl", hash = "sha256:f4c3d22fec12a2461427a29957ff07d35098ee2d976d3ba244e688b8b4057588"}, ] [package.extras] -docs = ["Sphinx (>=3.4)", "sphinx-rtd-theme (>=0.5)"] +docs = ["Sphinx (>=6.0)", "sphinx-rtd-theme (>=1.1.0)"] optional = ["python-socks", "wsaccel"] test = ["websockets"] [[package]] name = "wheel" -version = "0.41.1" +version = "0.42.0" description = "A built-package format for Python" optional = false python-versions = ">=3.7" files = [ - {file = "wheel-0.41.1-py3-none-any.whl", hash = "sha256:473219bd4cbedc62cea0cb309089b593e47c15c4a2531015f94e4e3b9a0f6981"}, - {file = "wheel-0.41.1.tar.gz", hash = "sha256:12b911f083e876e10c595779709f8a88a59f45aacc646492a67fe9ef796c1b47"}, + {file = "wheel-0.42.0-py3-none-any.whl", hash = "sha256:177f9c9b0d45c47873b619f5b650346d632cdc35fb5e4d25058e09c9e581433d"}, + {file = "wheel-0.42.0.tar.gz", hash = "sha256:c45be39f7882c9d34243236f2d63cbd58039e360f85d0913425fbd7ceea617a8"}, ] [package.extras] @@ -3437,20 +3532,20 @@ test = ["coverage (>=5.3.1)", "prompt-toolkit (>=3.0.29)", "pygments (>=2.2)", " [[package]] name = "zipp" -version = "3.16.2" +version = "3.17.0" description = "Backport of pathlib-compatible object wrapper for zip files" optional = false python-versions = ">=3.8" files = [ - {file = "zipp-3.16.2-py3-none-any.whl", hash = "sha256:679e51dd4403591b2d6838a48de3d283f3d188412a9782faadf845f298736ba0"}, - {file = "zipp-3.16.2.tar.gz", hash = "sha256:ebc15946aa78bd63458992fc81ec3b6f7b1e92d51c35e6de1c3804e73b799147"}, + {file = "zipp-3.17.0-py3-none-any.whl", hash = "sha256:0e923e726174922dce09c53c59ad483ff7bbb8e572e00c7f7c46b88556409f31"}, + {file = "zipp-3.17.0.tar.gz", hash = "sha256:84e64a1c28cf7e91ed2078bb8cc8c259cb19b76942096c8d7b84947690cabaf0"}, ] [package.extras] -docs = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"] +docs = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (<7.2.5)", "sphinx (>=3.5)", "sphinx-lint"] testing = ["big-O", "jaraco.functools", "jaraco.itertools", "more-itertools", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-ignore-flaky", "pytest-mypy (>=0.9.1)", "pytest-ruff"] [metadata] lock-version = "2.0" -python-versions = "^3.8.1" -content-hash = "a6e3f31d2bf1a3986a394fcbbd9142d0497a18f6e46171d1ea7e95c6642bf71c" +python-versions = ">=3.8.1,<3.12" +content-hash = "318aae7014fcc3840f2c4e0f1421966a77a27d279a0b48d4c3f2c44e7b941a7f" diff --git a/pyproject.toml b/pyproject.toml index 1a765afe..4ee13b57 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -14,7 +14,7 @@ include = [ "scicookie" = "scicookie.__main__:app" [tool.poetry.dependencies] -python = ">=3.8.1,<4" +python = ">=3.8.1,<3.12" cookieninja = "1.0.0" sh = "^2.0.4" colorama = "^0.4.6" @@ -23,35 +23,21 @@ pyyaml = ">=6.0.1" [tool.poetry.group.dev.dependencies] pytest = ">=7" -black = ">=22" -isort = ">=5" pre-commit = ">=3" -ruff = ">=0.0.278" -mypy = ">=1" +ruff = ">=0.1.5" +mypy = ">=1.5" pytest-cov = ">=3" pytest-cookies = ">=0.6.1" Sphinx = ">=4.4" jupyterlab = ">=3.5.1" jupyter-book = ">=0.12.3" myst-parser = ">=0.15" -makim = "1.8.2" +makim = "1.8.3" [build-system] requires = ["poetry-core>=1.0.0"] build-backend = "poetry.core.masonry.api" -[tool.black] -line-length = 79 -# note: for support "py39", we need to update black using poetry -# currently, it has conflicts with typing-extensions. -target-version = ["py38"] -force-exclude = '''(?x)( - docs/* - | src/scicookie/{{cookiecutter.project_slug}}/* - | src/scicookie/hooks/* - |.*\\.egg-info -)''' # TOML's single-quoted strings do not require escaping backslashes - [tool.mypy] no_strict_optional = false exclude = '''(?x)( @@ -85,11 +71,18 @@ select = [ "RUF", # Ruff-specific rules "I001", # isort ] -fixable = ["I001"] +fix = true [tool.ruff.pydocstyle] convention = "numpy" +[tool.ruff.isort] +# Use a single line between direct and from import +lines-between-types = 1 + +[tool.ruff.format] +quote-style = "double" + [tool.pytest.ini_options] testpaths = [ "tests", diff --git a/src/scicookie/cli.py b/src/scicookie/cli.py index 9f4fcc14..81513c7f 100644 --- a/src/scicookie/cli.py +++ b/src/scicookie/cli.py @@ -2,6 +2,7 @@ import json import os import sys + from pathlib import Path from typing import Union @@ -41,7 +42,7 @@ def call_cookiecutter(profile: Profile, answers: dict): # fill the answers with default value for question_id, question in questions.items(): - if not question.get("enabled", False) or question.get("control_flow"): + if not question.get("visible", False) or question.get("control_flow"): continue if question.get("type") == "multiple-choices": diff --git a/src/scicookie/logs.py b/src/scicookie/logs.py index eb687ca1..c6facd47 100644 --- a/src/scicookie/logs.py +++ b/src/scicookie/logs.py @@ -1,5 +1,6 @@ """Module for functions and classes for systen logs.""" import os + from enum import Enum from colorama import Fore diff --git a/src/scicookie/profiles/base.yaml b/src/scicookie/profiles/base.yaml index a9d8a59d..363dc16c 100644 --- a/src/scicookie/profiles/base.yaml +++ b/src/scicookie/profiles/base.yaml @@ -3,61 +3,62 @@ author_full_name: help: https://osl-incubator.github.io/scicookie/guide.html#information-about-the-project type: text default: Roronoa Zoro - enabled: true + visible: true author_email: message: Type the author's email help: https://osl-incubator.github.io/scicookie/guide.html#information-about-the-project type: text default: zoro@one.piece - enabled: true + visible: true project_name: message: Type the project's title help: https://osl-incubator.github.io/scicookie/guide.html#information-about-the-project type: text default: OSL Python package - enabled: true + visible: true project_short_description: message: Type a short description about the project help: https://osl-incubator.github.io/scicookie/guide.html#information-about-the-project type: text default: This Project aims to ... - enabled: true + visible: true project_slug: message: Type the code name for your project (e.g. the repository name) help: https://osl-incubator.github.io/scicookie/guide.html#information-about-the-project type: text default: osl-template - enabled: true + visible: true package_slug: message: Type the code name for your package (the name used to import your package) help: https://osl-incubator.github.io/scicookie/guide.html#information-about-the-project type: text default: "{{project_slug.replace('-', '_')}}" - enabled: true + visible: true project_version: message: Type the project version help: https://osl-incubator.github.io/scicookie/guide.html#information-about-the-project type: text default: 0.1.0 - enabled: true + visible: true project_url: message: Type the project URL help: https://osl-incubator.github.io/scicookie/guide.html#information-about-the-project type: text default: https://osl-template.com - enabled: true + visible: true project_license: message: Select one option for the project license help: https://osl-incubator.github.io/scicookie/guide.html#information-about-the-project type: single-choice + default: BSD 3 Clause choices: - MIT - BSD 3 Clause @@ -65,21 +66,23 @@ project_license: - Apache Software License 2.0 - GNU General Public License v3 - Other - enabled: true + visible: true project_layout: message: Select one option for the project layout help: "For more information, check:\n https://osl-incubator.github.io/scicookie/guide.html#project-layout" type: single-choice + default: src choices: - src - flat - enabled: false + visible: false build_system: message: Select one option for the build system help: "For more information, check:\n https://osl-incubator.github.io/scicookie/guide.html#build-system" type: single-choice + default: poetry choices: - poetry - flit @@ -90,7 +93,7 @@ build_system: - maturin - scikit-build-core - pybind11 - enabled: false + visible: false command_line_interface: message: Select one option for Command Line Interface (CLI) @@ -100,29 +103,31 @@ command_line_interface: - No command-line interface - Click - Argparse - enabled: false + visible: false documentation_engine: message: Select one option for the Documentation Engine help: "For more information, check:\n https://osl-incubator.github.io/scicookie/guide.html#documentation-engine" type: single-choice + default: mkdocs choices: - mkdocs - sphinx - jupyter-book - enabled: false + visible: false documentation_url: message: Type the documentation URL help: The URL for the documentation page. type: text default: "" - enabled: false + visible: false use_tools: message: Select all the initial tools you want to add to your project help: "For more information, check:\n https://osl-incubator.github.io/scicookie/guide.html#project-tools" type: multiple-choices + default: pre-commit choices: - bandit - black @@ -142,18 +147,18 @@ use_tools: - hypothesis - shellcheck - vulture - enabled: false + visible: false use_containers: message: Select one option for the container technology for this project help: "For more information, check:\n https://osl-incubator.github.io/scicookie/guide.html#integration-with-devops-tools" type: single-choice + default: None choices: - None - Docker - Podman - - kubernetes - enabled: false + visible: false # doc_template: # message: Select the template for the Documentation Engine @@ -164,30 +169,33 @@ code_of_conduct: message: Select one option for the Code of Conduct help: "For more information, check:\n https://osl-incubator.github.io/scicookie/guide.html#code-of-conduct" type: single-choice + default: contributor-covenant choices: - None - contributor-covenant - citizen-code-of-conduct - enabled: true + visible: true governance_document: message: Select one option for a governance document template help: "For more information, check:\n https://osl-incubator.github.io/scicookie/guide.html#governance-document" type: single-choice + default: None choices: - None - numpy-governance - sciml-governance - enabled: false + visible: false roadmap_document: message: Select one option for a Roadmap document template help: "For more information, check:\n https://osl-incubator.github.io/scicookie/guide.html#roadmap-document" type: single-choice + default: None choices: - None - pytorch-ignite-roadmap - enabled: false + visible: false # use_git: # message: Configure the local git repository? @@ -195,7 +203,7 @@ roadmap_document: # help: "" # type: "confirm" # default: True -# enabled: false +# visible: false git_username: message: Type the GIT username @@ -206,27 +214,29 @@ git_username: option: use_git values: - True - enabled: false + visible: false git_https_origin: message: Type the GIT HTTPS origin URL help: https://osl-incubator.github.io/scicookie/guide.html#control-version type: "text" + default: "" depends_on: option: use_git values: - True - enabled: false + visible: false git_https_upstream: message: Type the GIT HTTPS upstream URL help: https://osl-incubator.github.io/scicookie/guide.html#control-version type: "text" + default: "" depends_on: option: use_git values: - True - enabled: false + visible: false git_main_branch: message: Type the GIT main branch @@ -237,4 +247,4 @@ git_main_branch: option: use_git values: - True - enabled: false + visible: false diff --git a/src/scicookie/profiles/osl.yaml b/src/scicookie/profiles/osl.yaml index 20d2e5c8..daab7745 100644 --- a/src/scicookie/profiles/osl.yaml +++ b/src/scicookie/profiles/osl.yaml @@ -1,71 +1,102 @@ author_full_name: - enabled: true + visible: true author_email: - enabled: true + visible: true project_name: - enabled: true + default: My Super New Project + visible: true project_short_description: - enabled: true + visible: true project_slug: - enabled: true + default: my-project + visible: true package_slug: - enabled: true + visible: true project_version: - enabled: true + visible: true project_url: - enabled: true + default: https://my-project.com + visible: true project_license: - enabled: true + default: BSD 3 Clause + choices: + - MIT + - BSD 3 Clause + - Apache Software License 2.0 + - Other + visible: true project_layout: - enabled: true + default : src + visible: false + +build_system: + visible: true command_line_interface: - enabled: true + visible: true documentation_engine: - enabled: true + visible: true documentation_url: - enabled: true + default: "" + visible: true + +use_tools: + choices: + - bandit + - conda + - coverage + - ruff + - makim + - mccabe + - mypy + - pre-commit + - pytest + - hypothesis + - shellcheck + - vulture + visible: true + +use_containers: + visible: true code_of_conduct: - enabled: true + visible: true governance_document: - enabled: true + default: None + visible: false roadmap_document: - enabled: true - -build_system: - enabled: true - -use_tools: - enabled: true - -use_containers: - enabled: true + default: None + visible: false # use_git: -# enabled: true +# message: Configure the local git repository? +# control_flow: True +# help: "" +# type: "confirm" +# default: True +# visible: false git_username: - enabled: true + visible: true git_https_origin: - enabled: true + visible: true git_https_upstream: - enabled: true + visible: true git_main_branch: - enabled: true + visible: true diff --git a/src/scicookie/ui.py b/src/scicookie/ui.py index b96bea28..022370f6 100644 --- a/src/scicookie/ui.py +++ b/src/scicookie/ui.py @@ -4,6 +4,7 @@ from typing import Optional, Type import inquirer + from jinja2 import Template from scicookie.logs import SciCookieErrorType, SciCookieLogs @@ -13,7 +14,7 @@ def _create_question( question_id: str, question: dict ) -> Optional[inquirer.questions.Question]: # validation - if not question.get("enabled", False): + if not question.get("visible", False): return None # config required @@ -57,13 +58,13 @@ def _create_question( def make_questions(questions: dict): - """Generate all the enabled questions.""" + """Generate all the visible questions.""" answers: dict[str, str] = {} for question_id, question in questions.items(): question_obj = _create_question(question_id, question) # note: if question_object is None, that means that the question is - # not enabled + # not visible if question_obj: default_answer = question.get("default", "") default_answer = Template(default_answer).render(answers) From 2e0b2878f167aac470798ec69cc6b6e0f29ff70e Mon Sep 17 00:00:00 2001 From: Ivan Ogasawara Date: Sun, 3 Dec 2023 14:40:43 -0400 Subject: [PATCH 2/8] fix: Fix profile's mechanism and update OSL profile --- .makim.yaml | 1 - 1 file changed, 1 deletion(-) diff --git a/.makim.yaml b/.makim.yaml index 8f8ee814..51af8c92 100644 --- a/.makim.yaml +++ b/.makim.yaml @@ -11,7 +11,6 @@ groups: find . -name '*.egg-info' -exec rm -fr {} + find . -name '*.egg' -exec rm -f {} + find . -name '*.pyc' -exec rm -f {} + - find . -name find . -name '__pycache__' -exec rm -fr '*.pyo' -exec rm -f {} + find . -name '*~' -exec rm -f {} +{} + rm -f .coverage From d5e91ba77e5912bbc46689aa1bc0e75ab114bc8d Mon Sep 17 00:00:00 2001 From: Ivan Ogasawara Date: Sun, 3 Dec 2023 14:46:56 -0400 Subject: [PATCH 3/8] fix clean command --- .makim.yaml | 16 +++++++++------- 1 file changed, 9 insertions(+), 7 deletions(-) diff --git a/.makim.yaml b/.makim.yaml index 51af8c92..ef46bf85 100644 --- a/.makim.yaml +++ b/.makim.yaml @@ -1,21 +1,23 @@ version: 1.0 groups: - default: + clean: targets: - clean: + tmp: help: Clean unnecessary temporary files + shell: bash run: | rm -fr build/ rm -fr dist/ rm -fr .eggs/ - find . -name '*.egg-info' -exec rm -fr {} + - find . -name '*.egg' -exec rm -f {} + - find . -name '*.pyc' -exec rm -f {} + - find . -name '__pycache__' -exec rm -fr '*.pyo' -exec rm -f {} + - find . -name '*~' -exec rm -f {} +{} + rm -f .coverage rm -fr htmlcov/ rm -fr .pytest_cache + find . -name '*.egg-info' -exec rm -fr {} + + find . -name '*.egg' -exec rm -f {} + + find . -name '*.pyc' -exec rm -f {} + + find . -name '*.pyo' -exec rm -f {} + + find . -name '__pycache__' -exec rm -fr {} + + find . -name '*~' -exec rm -f {} + docs: targets: From 2ca416adc534d86111bf4774d4cf81b95b9192e5 Mon Sep 17 00:00:00 2001 From: Ivan Ogasawara Date: Sun, 3 Dec 2023 18:02:26 -0400 Subject: [PATCH 4/8] fix git workflow --- src/scicookie/__init__.py | 2 +- src/scicookie/cli.py | 10 ++- src/scicookie/hooks/post_gen_project.py | 73 +++++++++++++------ src/scicookie/profiles/base.yaml | 56 ++++---------- src/scicookie/profiles/osl.yaml | 22 +++--- src/scicookie/ui.py | 57 ++++++++++++++- .../.github/ISSUE_TEMPLATE/bug-report.yml | 6 +- .../.github/ISSUE_TEMPLATE/config.yml | 12 +-- .../ISSUE_TEMPLATE/documentation-report.yml | 6 +- .../ISSUE_TEMPLATE/feature-request.yml | 8 +- 10 files changed, 153 insertions(+), 99 deletions(-) diff --git a/src/scicookie/__init__.py b/src/scicookie/__init__.py index 97b81270..0287749b 100644 --- a/src/scicookie/__init__.py +++ b/src/scicookie/__init__.py @@ -1 +1 @@ -"""SciCookie is a wrap around cookiecutter/cookieninja with a better TUI.""" +"""SciCookie is a wrap around cookiecutter/cookieninja with an improved TUI.""" diff --git a/src/scicookie/cli.py b/src/scicookie/cli.py index 81513c7f..25305f4f 100644 --- a/src/scicookie/cli.py +++ b/src/scicookie/cli.py @@ -31,7 +31,7 @@ def _get_cookiecutter_default_answer( return answer_definition[0] -def call_cookiecutter(profile: Profile, answers: dict): +def call_cookiecutter(profile: Profile, answers: dict): # noqa: PLR0912 """Call cookiecutter/cookieninja with the parameters from the TUI.""" answers_profile = {} cookie_args = [] @@ -42,7 +42,13 @@ def call_cookiecutter(profile: Profile, answers: dict): # fill the answers with default value for question_id, question in questions.items(): - if not question.get("visible", False) or question.get("control_flow"): + if question.get("control_flow", False): + # "control_flow" is not defined in cookiecutter config + continue + + if not question.get("visible", False): + # get the default for non visible questions + answers_profile[question_id] = question.get("default") continue if question.get("type") == "multiple-choices": diff --git a/src/scicookie/hooks/post_gen_project.py b/src/scicookie/hooks/post_gen_project.py index c670aa25..6f20e025 100644 --- a/src/scicookie/hooks/post_gen_project.py +++ b/src/scicookie/hooks/post_gen_project.py @@ -266,48 +266,79 @@ def validation(): ) -def prepare_git(): - subprocess.call(["git", "init"]) - +def prepare_git() -> None: git_https_origin = http2ssh("{{cookiecutter.git_https_origin}}") git_https_upstream = http2ssh("{{cookiecutter.git_https_upstream}}") git_main_branch = http2ssh("{{cookiecutter.git_main_branch}}") unique_id = datetime.datetime.now().strftime("%Y%m%d%H%M%S") - git_new_branch = f"add-initial-structure-{unique_id}" + git_new_branch = f"initial-from-scicookie-{unique_id}" + git_stash_branch = f"stash-from-scicookie-{unique_id}" git_author_name = "{{cookiecutter.author_full_name}}" git_author_email = "{{cookiecutter.author_email}}" - empty_repo = not (git_https_origin or git_https_upstream) - - if not empty_repo: - subprocess.call(["git", "stash"]) - - if git_https_origin != "": - subprocess.call(["git", "remote", "add", "origin", git_https_origin]) - subprocess.call(["git", "fetch", "--all"]) - subprocess.call(["git", "checkout", f"origin/{git_main_branch}"]) + use_remote = git_https_origin != '' or git_https_upstream != '' - if git_https_upstream != "": + if not use_remote: + subprocess.call(["git", "init", "-b", git_main_branch]) subprocess.call( - ["git", "remote", "add", "upstream", git_https_upstream] + ["git", "config", "user.name", git_author_name] + ) + subprocess.call( + ["git", "config", "user.email", git_author_email] ) - subprocess.call(["git", "fetch", "--all"]) + subprocess.call(["git", "add", "."]) + subprocess.call([ + "git", "commit", "-m", "Initial commit from SciCookie", "--no-verify" + ]) + return + subprocess.call(["git", "init", "-b", git_stash_branch]) + + # config subprocess.call( ["git", "config", "user.name", git_author_name] ) subprocess.call( ["git", "config", "user.email", git_author_email] ) + if git_https_origin != "": + subprocess.call(["git", "remote", "add", "origin", git_https_origin]) - subprocess.call(["git", "checkout", "-b", git_new_branch]) - - if not empty_repo: - subprocess.call(["git", "stash", "pop"]) + if git_https_upstream != "": + subprocess.call( + ["git", "remote", "add", "upstream", git_https_upstream] + ) + subprocess.call(["git", "fetch", "--all"]) + + # prepare the first commit + subprocess.call([ + "git", + "commit", + "--allow-empty", + "-m", + "Empty commit from SciCookie", + "--no-verify" + ]) + subprocess.call([ + "git", "stash", "-u" + ]) + + subprocess.call(["git", "checkout", f"origin/{git_main_branch}"]) + subprocess.call(["git", "checkout", "-b", git_new_branch]) + # note: https://stackoverflow.com/q/16606203files + subprocess.call( + "git stash show -p | git apply && git stash drop".split("|"), + shell=True, + stdout=subprocess.PIPE, + ) + subprocess.call(["git", "stash", "pop"]) subprocess.call(["git", "add", "."]) - subprocess.call(["git", "commit", "-m", "Initial commit", "--no-verify"]) + subprocess.call([ + "git", "commit", "-m", "Initial commit from SciCookie", "--no-verify" + ]) + subprocess.call(["git", "branch", "-D", git_stash_branch]) def add_binding_source_files(): diff --git a/src/scicookie/profiles/base.yaml b/src/scicookie/profiles/base.yaml index 363dc16c..ebb78116 100644 --- a/src/scicookie/profiles/base.yaml +++ b/src/scicookie/profiles/base.yaml @@ -30,7 +30,7 @@ project_slug: message: Type the code name for your project (e.g. the repository name) help: https://osl-incubator.github.io/scicookie/guide.html#information-about-the-project type: text - default: osl-template + default: "{{ project_name.replace(' ', '-').lower() }}" visible: true package_slug: @@ -51,17 +51,17 @@ project_url: message: Type the project URL help: https://osl-incubator.github.io/scicookie/guide.html#information-about-the-project type: text - default: https://osl-template.com + default: "{{ 'https://' + project_slug + '.com' }}" visible: true project_license: message: Select one option for the project license help: https://osl-incubator.github.io/scicookie/guide.html#information-about-the-project type: single-choice - default: BSD 3 Clause + # first choice is the default choices: - - MIT - BSD 3 Clause + - MIT - ISC license - Apache Software License 2.0 - GNU General Public License v3 @@ -72,7 +72,7 @@ project_layout: message: Select one option for the project layout help: "For more information, check:\n https://osl-incubator.github.io/scicookie/guide.html#project-layout" type: single-choice - default: src + # first choice is the default choices: - src - flat @@ -82,7 +82,7 @@ build_system: message: Select one option for the build system help: "For more information, check:\n https://osl-incubator.github.io/scicookie/guide.html#build-system" type: single-choice - default: poetry + # first choice is the default choices: - poetry - flit @@ -99,6 +99,7 @@ command_line_interface: message: Select one option for Command Line Interface (CLI) help: "For more information, check:\n https://osl-incubator.github.io/scicookie/guide.html#command-line-interfaces-clis" type: single-choice + # first choice is the default choices: - No command-line interface - Click @@ -109,7 +110,7 @@ documentation_engine: message: Select one option for the Documentation Engine help: "For more information, check:\n https://osl-incubator.github.io/scicookie/guide.html#documentation-engine" type: single-choice - default: mkdocs + # first choice is the default choices: - mkdocs - sphinx @@ -120,14 +121,13 @@ documentation_url: message: Type the documentation URL help: The URL for the documentation page. type: text - default: "" + default: "{{ project_url }}" visible: false use_tools: message: Select all the initial tools you want to add to your project help: "For more information, check:\n https://osl-incubator.github.io/scicookie/guide.html#project-tools" type: multiple-choices - default: pre-commit choices: - bandit - black @@ -153,7 +153,7 @@ use_containers: message: Select one option for the container technology for this project help: "For more information, check:\n https://osl-incubator.github.io/scicookie/guide.html#integration-with-devops-tools" type: single-choice - default: None + # first choice is the default choices: - None - Docker @@ -169,7 +169,7 @@ code_of_conduct: message: Select one option for the Code of Conduct help: "For more information, check:\n https://osl-incubator.github.io/scicookie/guide.html#code-of-conduct" type: single-choice - default: contributor-covenant + # first choice is the default choices: - None - contributor-covenant @@ -180,7 +180,7 @@ governance_document: message: Select one option for a governance document template help: "For more information, check:\n https://osl-incubator.github.io/scicookie/guide.html#governance-document" type: single-choice - default: None + # first choice is the default choices: - None - numpy-governance @@ -191,60 +191,32 @@ roadmap_document: message: Select one option for a Roadmap document template help: "For more information, check:\n https://osl-incubator.github.io/scicookie/guide.html#roadmap-document" type: single-choice - default: None + # first choice is the default choices: - None - pytorch-ignite-roadmap visible: false -# use_git: -# message: Configure the local git repository? -# control_flow: True -# help: "" -# type: "confirm" -# default: True -# visible: false - git_username: message: Type the GIT username help: https://osl-incubator.github.io/scicookie/guide.html#control-version type: "text" - default: zoro_roronoa - depends_on: - option: use_git - values: - - True - visible: false + default: "" git_https_origin: message: Type the GIT HTTPS origin URL help: https://osl-incubator.github.io/scicookie/guide.html#control-version type: "text" default: "" - depends_on: - option: use_git - values: - - True - visible: false git_https_upstream: message: Type the GIT HTTPS upstream URL help: https://osl-incubator.github.io/scicookie/guide.html#control-version type: "text" default: "" - depends_on: - option: use_git - values: - - True - visible: false git_main_branch: message: Type the GIT main branch help: https://osl-incubator.github.io/scicookie/guide.html#control-version type: "text" default: main - depends_on: - option: use_git - values: - - True - visible: false diff --git a/src/scicookie/profiles/osl.yaml b/src/scicookie/profiles/osl.yaml index daab7745..9d26500c 100644 --- a/src/scicookie/profiles/osl.yaml +++ b/src/scicookie/profiles/osl.yaml @@ -1,7 +1,9 @@ author_full_name: + default: Yor Briar visible: true author_email: + default: yor.briar@spyx.family visible: true project_name: @@ -12,7 +14,6 @@ project_short_description: visible: true project_slug: - default: my-project visible: true package_slug: @@ -22,14 +23,13 @@ project_version: visible: true project_url: - default: https://my-project.com visible: true project_license: - default: BSD 3 Clause + # first choice is the default choices: - - MIT - BSD 3 Clause + - MIT - Apache Software License 2.0 - Other visible: true @@ -48,7 +48,6 @@ documentation_engine: visible: true documentation_url: - default: "" visible: true use_tools: @@ -71,6 +70,9 @@ use_containers: visible: true code_of_conduct: + choices: + - contributor-covenant + - citizen-code-of-conduct visible: true governance_document: @@ -81,18 +83,12 @@ roadmap_document: default: None visible: false -# use_git: -# message: Configure the local git repository? -# control_flow: True -# help: "" -# type: "confirm" -# default: True -# visible: false - git_username: + default: yorbriar visible: true git_https_origin: + default: "{{ 'https://github.com/' + git_username + '/' + project_slug }}" visible: true git_https_upstream: diff --git a/src/scicookie/ui.py b/src/scicookie/ui.py index 022370f6..17f01ed4 100644 --- a/src/scicookie/ui.py +++ b/src/scicookie/ui.py @@ -1,14 +1,20 @@ """Define functions for the interface with the user.""" from __future__ import annotations -from typing import Optional, Type +import os + +from typing import Any, Optional, Type import inquirer +from colorama import Fore, Style, init from jinja2 import Template from scicookie.logs import SciCookieErrorType, SciCookieLogs +# Initialize Colorama +init() + def _create_question( question_id: str, question: dict @@ -24,6 +30,7 @@ def _create_question( # todo: implement depends on workflow, it needs refactoring the code # because it needs access to the answer # question_depends_on = question.get("depends_on") + # it should allow multiple conditionals question_types_available = [ "text", @@ -57,10 +64,37 @@ def _create_question( ) -def make_questions(questions: dict): +def check_dependencies_satisfied( + question: dict[str, Any], answers: dict[str, str] +) -> bool: + """ + Check if dependencies are satisfied. + + Note: Not implemented yet. + """ + return True + + +def make_questions(questions: dict[str, Any]) -> dict[str, str]: """Generate all the visible questions.""" answers: dict[str, str] = {} + # Get the size of the terminal window + columns, _ = os.get_terminal_size() + + # Print a line + print("-" * columns) + print( + Fore.YELLOW + + "NOTE: " + + Fore.RESET + + "For questions with single or multiple choices, use the ARROW " + + "keys to navigate through the options. Use the SPACE BAR to " + + "select or deselect an option. Confirm your selection with " + + "the ENTER key." + ) + print("." * columns) + for question_id, question in questions.items(): question_obj = _create_question(question_id, question) # note: if question_object is None, that means that the question is @@ -68,9 +102,23 @@ def make_questions(questions: dict): if question_obj: default_answer = question.get("default", "") default_answer = Template(default_answer).render(answers) + + if not check_dependencies_satisfied(question, answers): + answers[question_id] = default_answer + continue + message = question.get("message", "") - print(f"{message} (default: {default_answer}):") - print(">> HELP:", question["help"]) + print( + Style.BRIGHT + + f"{message} (" + + Fore.YELLOW + + f"default: {default_answer}" + + Fore.RESET + + Style.BRIGHT + + "):" + + Fore.RESET + ) + print(Fore.BLUE + ">> HELP: " + question["help"] + Fore.RESET) answer = inquirer.prompt([question_obj]) # note: if answer is none, it means that the user cancelled @@ -80,4 +128,5 @@ def make_questions(questions: dict): answers[question_id] = ( answer.get(question_id, "") or default_answer ) + print("." * columns) return answers diff --git a/src/scicookie/{{cookiecutter.project_slug}}/.github/ISSUE_TEMPLATE/bug-report.yml b/src/scicookie/{{cookiecutter.project_slug}}/.github/ISSUE_TEMPLATE/bug-report.yml index a0fb06f6..16249b31 100644 --- a/src/scicookie/{{cookiecutter.project_slug}}/.github/ISSUE_TEMPLATE/bug-report.yml +++ b/src/scicookie/{{cookiecutter.project_slug}}/.github/ISSUE_TEMPLATE/bug-report.yml @@ -1,9 +1,9 @@ -{%- if not cookiecutter.git_https_upstream -%} +{%- if cookiecutter.git_https_upstream -%} {% set github_url = cookiecutter.git_https_upstream -%} -{%- elif not cookiecutter.git_https_origin -%} +{%- elif cookiecutter.git_https_origin -%} {% set github_url = cookiecutter.git_https_origin -%} {%- else -%} -{% set github_url = "https://github.com/" + cookiecutter.project_name + "/" + cookiecutter.project_name -%} +{% set github_url = "https://github.com/" + cookiecutter.project_slug + "/" + cookiecutter.project_slug -%} {%- endif -%} --- name: 🐛 Bug Report diff --git a/src/scicookie/{{cookiecutter.project_slug}}/.github/ISSUE_TEMPLATE/config.yml b/src/scicookie/{{cookiecutter.project_slug}}/.github/ISSUE_TEMPLATE/config.yml index 97e7913a..3fe517f1 100644 --- a/src/scicookie/{{cookiecutter.project_slug}}/.github/ISSUE_TEMPLATE/config.yml +++ b/src/scicookie/{{cookiecutter.project_slug}}/.github/ISSUE_TEMPLATE/config.yml @@ -1,9 +1,9 @@ -{%- if not cookiecutter.git_https_upstream -%} +{%- if cookiecutter.git_https_upstream -%} {% set github_url = cookiecutter.git_https_upstream -%} -{%- elif not cookiecutter.git_https_origin -%} +{%- elif cookiecutter.git_https_origin -%} {% set github_url = cookiecutter.git_https_origin -%} {%- else -%} -{% set github_url = "https://github.com/" + cookiecutter.project_name + "/" + cookiecutter.project_name -%} +{% set github_url = "https://github.com/" + cookiecutter.project_slug + "/" + cookiecutter.project_slug -%} {%- endif -%} # Ref: https://help.github.com/en/github/building-a-strong-community/configuring-issue-templates-for-your-repository#configuring-the-template-chooser blank_issues_enabled: true @@ -11,12 +11,12 @@ contact_links: - name: 🙋 Usage Questions url: {{ github_url }}/discussions about: | - Use {{ cookiecutter.project_name }}'s GitHub Discussions to ask "How do I do X with Cookiecutter?". + Use {{ cookiecutter.project_name }}'s GitHub Discussions to ask "How do I do X with {{ cookiecutter.project_name }}?". - name: 📖 Tutorial url: {{ github_url }} about: | The {{ cookiecutter.project_name }} tutorial is continually updated and provides an in depth walkthrough - of how to use the latest release of Cookiecutter. + of how to use the latest release of {{ cookiecutter.project_name }}. - name: 📝 {{ cookiecutter.project_name }} Code of Conduct url: {{ github_url }}/coc/CODE_OF_CONDUCT.md - about: Expectations for how people will interact with each other on Cookiecutter's GitHub. + about: Expectations for how people will interact with each other on {{ cookiecutter.project_name }}'s GitHub. diff --git a/src/scicookie/{{cookiecutter.project_slug}}/.github/ISSUE_TEMPLATE/documentation-report.yml b/src/scicookie/{{cookiecutter.project_slug}}/.github/ISSUE_TEMPLATE/documentation-report.yml index 542043e5..2e17fe33 100644 --- a/src/scicookie/{{cookiecutter.project_slug}}/.github/ISSUE_TEMPLATE/documentation-report.yml +++ b/src/scicookie/{{cookiecutter.project_slug}}/.github/ISSUE_TEMPLATE/documentation-report.yml @@ -1,9 +1,9 @@ -{%- if not cookiecutter.git_https_upstream -%} +{%- if cookiecutter.git_https_upstream -%} {% set github_url = cookiecutter.git_https_upstream -%} -{%- elif not cookiecutter.git_https_origin -%} +{%- elif cookiecutter.git_https_origin -%} {% set github_url = cookiecutter.git_https_origin -%} {%- else -%} -{% set github_url = "https://github.com/" + cookiecutter.project_name + "/" + cookiecutter.project_name -%} +{% set github_url = "https://github.com/" + cookiecutter.project_slug + "/" + cookiecutter.project_slug -%} {%- endif -%} --- name: 📝 Documentation Report diff --git a/src/scicookie/{{cookiecutter.project_slug}}/.github/ISSUE_TEMPLATE/feature-request.yml b/src/scicookie/{{cookiecutter.project_slug}}/.github/ISSUE_TEMPLATE/feature-request.yml index 0a5eec2e..ba730114 100644 --- a/src/scicookie/{{cookiecutter.project_slug}}/.github/ISSUE_TEMPLATE/feature-request.yml +++ b/src/scicookie/{{cookiecutter.project_slug}}/.github/ISSUE_TEMPLATE/feature-request.yml @@ -1,9 +1,9 @@ -{%- if not cookiecutter.git_https_upstream -%} +{%- if cookiecutter.git_https_upstream -%} {% set github_url = cookiecutter.git_https_upstream -%} -{%- elif not cookiecutter.git_https_origin -%} +{%- elif cookiecutter.git_https_origin -%} {% set github_url = cookiecutter.git_https_origin -%} {%- else -%} -{% set github_url = "https://github.com/" + cookiecutter.project_name + "/" + cookiecutter.project_name -%} +{% set github_url = "https://github.com/" + cookiecutter.project_slug + "/" + cookiecutter.project_slug -%} {%- endif -%} --- name: ✨ Feature Request @@ -36,7 +36,7 @@ body: What's the problem this feature will solve? What are you trying to do, that you are unable to achieve - with the **latest** release of Cookiecutter? + with the **latest** release of {{ cookiecutter.project_name }}? * Provide examples of real-world use cases that this would enable From 80ea4c4bf19a7a456bf0340402ae3e1a706ab564 Mon Sep 17 00:00:00 2001 From: Ivan Ogasawara Date: Sun, 3 Dec 2023 18:08:20 -0400 Subject: [PATCH 5/8] fix remain issue with git workflow --- src/scicookie/hooks/post_gen_project.py | 15 +++------------ 1 file changed, 3 insertions(+), 12 deletions(-) diff --git a/src/scicookie/hooks/post_gen_project.py b/src/scicookie/hooks/post_gen_project.py index 6f20e025..4ccafcb6 100644 --- a/src/scicookie/hooks/post_gen_project.py +++ b/src/scicookie/hooks/post_gen_project.py @@ -313,27 +313,18 @@ def prepare_git() -> None: subprocess.call(["git", "fetch", "--all"]) # prepare the first commit + subprocess.call(["git", "add", "."]) subprocess.call([ "git", "commit", - "--allow-empty", "-m", - "Empty commit from SciCookie", + "A temporary from SciCookie", "--no-verify" ]) - subprocess.call([ - "git", "stash", "-u" - ]) subprocess.call(["git", "checkout", f"origin/{git_main_branch}"]) subprocess.call(["git", "checkout", "-b", git_new_branch]) - # note: https://stackoverflow.com/q/16606203files - subprocess.call( - "git stash show -p | git apply && git stash drop".split("|"), - shell=True, - stdout=subprocess.PIPE, - ) - subprocess.call(["git", "stash", "pop"]) + subprocess.call(["git", "checkout", git_stash_branch, "--", "."]) subprocess.call(["git", "add", "."]) subprocess.call([ "git", "commit", "-m", "Initial commit from SciCookie", "--no-verify" From 52ee27c890fe02814192970699e272f2d68d7064 Mon Sep 17 00:00:00 2001 From: Ivan Ogasawara Date: Mon, 4 Dec 2023 18:25:13 -0400 Subject: [PATCH 6/8] fix profile flag --- pyproject.toml | 3 ++- src/scicookie/cli.py | 56 +++++++++++++++++++++++++++++++++++++++- src/scicookie/profile.py | 8 ++++-- 3 files changed, 63 insertions(+), 4 deletions(-) diff --git a/pyproject.toml b/pyproject.toml index 4ee13b57..ed617752 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -3,11 +3,12 @@ name = "scicookie" version = "0.6.2" # semantic-release description = "Cookiecutter template for a Python package" authors = ["Ivan Ogasawara "] -license = "BSD" +license = "BSD-3-Clause" include = [ {path = "src/scicookie/cookiecutter.json"}, {path = "src/scicookie/{{cookiecutter.project_slug}}"}, {path = "src/scicookie/hooks"}, + {path = "src/scicookie/profiles"}, ] [tool.poetry.scripts] diff --git a/src/scicookie/cli.py b/src/scicookie/cli.py index 25305f4f..1baba2bc 100644 --- a/src/scicookie/cli.py +++ b/src/scicookie/cli.py @@ -1,4 +1,5 @@ """Module with CLI functions.""" +import argparse import json import os import sys @@ -16,6 +17,31 @@ COOKIECUTTER_FILE_PATH = PACKAGE_PATH / "cookiecutter.json" +class CustomHelpFormatter(argparse.RawTextHelpFormatter): + """Formatter for generating usage messages and argument help strings. + + Only the name of this class is considered a public API. All the methods + provided by the class are considered an implementation detail. + """ + + def __init__( + self, + prog, + indent_increment=2, + max_help_position=4, + width=None, + **kwargs, + ): + """Define the parameters for the argparse help text.""" + super().__init__( + prog, + indent_increment=indent_increment, + max_help_position=max_help_position, + width=width, + **kwargs, + ) + + def _get_cookiecutter_default_answer( answer_definition: Union[str, list] ) -> str: @@ -105,7 +131,35 @@ def call_cookiecutter(profile: Profile, answers: dict): # noqa: PLR0912 def app(): """Run SciCookie.""" # note: this parameter should be provided by a CLI argument - profile = Profile("osl") + + parser = argparse.ArgumentParser( + prog="SciCookie", + description=( + "SciCookie is a template developed by Open Science Labs that " + "creates projects through different options of profile. " + "It serves as a boilerplate which can be used by beginners as " + "well as full fledged developers to simplify the project creation " + "process and save considerable amount of time. It creates " + "projects with an initial layout that includes recommended " + "tools, workflows, and project structure." + ), + epilog=( + "If you have any problem, open an issue at: " + "https://github.com/osl-incubator/scicookie" + ), + add_help=True, + formatter_class=CustomHelpFormatter, + ) + parser.add_argument( + "--profile", + type=str, + default="base", + help="Select the profile to be used", + ) + + args = parser.parse_args() + + profile = Profile(args.profile) answers = make_questions(profile.config) diff --git a/src/scicookie/profile.py b/src/scicookie/profile.py index 9b833f8b..c8397fd3 100644 --- a/src/scicookie/profile.py +++ b/src/scicookie/profile.py @@ -32,8 +32,12 @@ def __init__(self, profile_name: str): self.config = self.read_config() def _load_profiles_available(self): - # note: it should catch it from the files' name - self.profiles_available = ["osl"] + self.profiles_available = [] + + profiles_path = Path(__file__).absolute().parent / "profiles" + + for file in profiles_path.glob("*.yaml"): + self.profiles_available.append(file.stem) def read_config(self): """Read the config file.""" From 51eb650500564e09a2a8a4ac5b73d9d712808514 Mon Sep 17 00:00:00 2001 From: Ivan Ogasawara Date: Mon, 4 Dec 2023 19:17:08 -0400 Subject: [PATCH 7/8] fix remain issues --- src/scicookie/cookiecutter.json | 2 +- src/scicookie/hooks/post_gen_project.py | 2 +- src/scicookie/profiles/base.yaml | 29 +++++++----- src/scicookie/profiles/osl.yaml | 4 +- src/scicookie/ui.py | 60 ++++++++++++------------- 5 files changed, 53 insertions(+), 44 deletions(-) diff --git a/src/scicookie/cookiecutter.json b/src/scicookie/cookiecutter.json index a4800d6c..3600c277 100644 --- a/src/scicookie/cookiecutter.json +++ b/src/scicookie/cookiecutter.json @@ -20,7 +20,7 @@ "flat" ], "command_line_interface": [ - "No command-line interface", + "None", "Click", "Argparse" ], diff --git a/src/scicookie/hooks/post_gen_project.py b/src/scicookie/hooks/post_gen_project.py index 4ccafcb6..6921336c 100644 --- a/src/scicookie/hooks/post_gen_project.py +++ b/src/scicookie/hooks/post_gen_project.py @@ -31,7 +31,7 @@ USE_BLUE = {{ cookiecutter.use_blue == "yes" }} USE_BANDIT = {{ cookiecutter.use_bandit == "yes" }} USE_CONTAINERS = {{ cookiecutter.use_containers in ['Docker', 'Podman'] }} -USE_CLI = {{ cookiecutter.command_line_interface != "No command-line interface" }} +USE_CLI = {{ cookiecutter.command_line_interface != "None" }} USE_CONDA = {{ cookiecutter.use_conda == "yes" }} USE_MAKE = {{ cookiecutter.use_make == "yes" }} USE_MAKIM = {{ cookiecutter.use_makim == "yes" }} diff --git a/src/scicookie/profiles/base.yaml b/src/scicookie/profiles/base.yaml index ebb78116..135ce9cc 100644 --- a/src/scicookie/profiles/base.yaml +++ b/src/scicookie/profiles/base.yaml @@ -58,7 +58,8 @@ project_license: message: Select one option for the project license help: https://osl-incubator.github.io/scicookie/guide.html#information-about-the-project type: single-choice - # first choice is the default + default: BSD 3 Clause + # first choice is the default for the UI choices: - BSD 3 Clause - MIT @@ -72,7 +73,8 @@ project_layout: message: Select one option for the project layout help: "For more information, check:\n https://osl-incubator.github.io/scicookie/guide.html#project-layout" type: single-choice - # first choice is the default + default: src + # first choice is the default for the UI choices: - src - flat @@ -82,7 +84,8 @@ build_system: message: Select one option for the build system help: "For more information, check:\n https://osl-incubator.github.io/scicookie/guide.html#build-system" type: single-choice - # first choice is the default + default: poetry + # first choice is the default for the UI choices: - poetry - flit @@ -99,9 +102,10 @@ command_line_interface: message: Select one option for Command Line Interface (CLI) help: "For more information, check:\n https://osl-incubator.github.io/scicookie/guide.html#command-line-interfaces-clis" type: single-choice - # first choice is the default + default: None + # first choice is the default for the UI choices: - - No command-line interface + - None - Click - Argparse visible: false @@ -110,7 +114,8 @@ documentation_engine: message: Select one option for the Documentation Engine help: "For more information, check:\n https://osl-incubator.github.io/scicookie/guide.html#documentation-engine" type: single-choice - # first choice is the default + default: mkdocs + # first choice is the default for the UI choices: - mkdocs - sphinx @@ -153,7 +158,8 @@ use_containers: message: Select one option for the container technology for this project help: "For more information, check:\n https://osl-incubator.github.io/scicookie/guide.html#integration-with-devops-tools" type: single-choice - # first choice is the default + default: None + # first choice is the default for the UI choices: - None - Docker @@ -169,7 +175,8 @@ code_of_conduct: message: Select one option for the Code of Conduct help: "For more information, check:\n https://osl-incubator.github.io/scicookie/guide.html#code-of-conduct" type: single-choice - # first choice is the default + default: None + # first choice is the default for the UI choices: - None - contributor-covenant @@ -180,7 +187,8 @@ governance_document: message: Select one option for a governance document template help: "For more information, check:\n https://osl-incubator.github.io/scicookie/guide.html#governance-document" type: single-choice - # first choice is the default + default: None + # first choice is the default for the UI choices: - None - numpy-governance @@ -191,7 +199,8 @@ roadmap_document: message: Select one option for a Roadmap document template help: "For more information, check:\n https://osl-incubator.github.io/scicookie/guide.html#roadmap-document" type: single-choice - # first choice is the default + default: None + # first choice is the default for the UI choices: - None - pytorch-ignite-roadmap diff --git a/src/scicookie/profiles/osl.yaml b/src/scicookie/profiles/osl.yaml index 9d26500c..161584f7 100644 --- a/src/scicookie/profiles/osl.yaml +++ b/src/scicookie/profiles/osl.yaml @@ -26,7 +26,7 @@ project_url: visible: true project_license: - # first choice is the default + # first choice is the default for the UI choices: - BSD 3 Clause - MIT @@ -88,7 +88,7 @@ git_username: visible: true git_https_origin: - default: "{{ 'https://github.com/' + git_username + '/' + project_slug }}" + default: "" visible: true git_https_upstream: diff --git a/src/scicookie/ui.py b/src/scicookie/ui.py index 17f01ed4..c3ef4fb3 100644 --- a/src/scicookie/ui.py +++ b/src/scicookie/ui.py @@ -97,36 +97,36 @@ def make_questions(questions: dict[str, Any]) -> dict[str, str]: for question_id, question in questions.items(): question_obj = _create_question(question_id, question) + + default_answer = question.get("default", "") + default_answer = Template(default_answer).render(answers) + # note: if question_object is None, that means that the question is # not visible - if question_obj: - default_answer = question.get("default", "") - default_answer = Template(default_answer).render(answers) - - if not check_dependencies_satisfied(question, answers): - answers[question_id] = default_answer - continue - - message = question.get("message", "") - print( - Style.BRIGHT - + f"{message} (" - + Fore.YELLOW - + f"default: {default_answer}" - + Fore.RESET - + Style.BRIGHT - + "):" - + Fore.RESET - ) - print(Fore.BLUE + ">> HELP: " + question["help"] + Fore.RESET) - answer = inquirer.prompt([question_obj]) - - # note: if answer is none, it means that the user cancelled - # the process. - if answer is None: - return {} - answers[question_id] = ( - answer.get(question_id, "") or default_answer - ) - print("." * columns) + if not ( + check_dependencies_satisfied(question, answers) and question_obj + ): + answers[question_id] = default_answer + continue + + message = question.get("message", "") + print( + Style.BRIGHT + + f"{message} (" + + Fore.YELLOW + + f"default: {default_answer}" + + Fore.RESET + + Style.BRIGHT + + "):" + + Fore.RESET + ) + print(Fore.BLUE + ">> HELP: " + question["help"] + Fore.RESET) + answer = inquirer.prompt([question_obj]) + + # note: if answer is none, it means that the user cancelled + # the process. + if answer is None: + return {} + answers[question_id] = answer.get(question_id, "") or default_answer + print("." * columns) return answers From 88e7bb7ddfb0d51312c7ea93abc23f0046d88735 Mon Sep 17 00:00:00 2001 From: Ivan Ogasawara Date: Wed, 6 Dec 2023 21:55:38 -0400 Subject: [PATCH 8/8] apply changes from the review --- pyproject.toml | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/pyproject.toml b/pyproject.toml index ed617752..a7c19761 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -63,6 +63,8 @@ exclude = [ 'src/scicookie/\{\{cookiecutter.project_slug\}\}', 'src/scicookie/hooks', ] + +[tool.ruff.lint] select = [ "E", # pycodestyle "F", # pyflakes @@ -72,7 +74,6 @@ select = [ "RUF", # Ruff-specific rules "I001", # isort ] -fix = true [tool.ruff.pydocstyle] convention = "numpy"