diff --git a/src/Analyser/IgnoredError.php b/src/Analyser/IgnoredError.php
index 52bacade42..09a2c6225c 100644
--- a/src/Analyser/IgnoredError.php
+++ b/src/Analyser/IgnoredError.php
@@ -5,7 +5,6 @@
 use Nette\Utils\Strings;
 use PHPStan\File\FileExcluder;
 use PHPStan\File\FileHelper;
-use PHPStan\PhpDoc\EmptyStubFilesProvider;
 use function count;
 use function implode;
 use function is_array;
@@ -60,7 +59,7 @@ public static function shouldIgnore(
 				return false;
 			}
 
-			$fileExcluder = new FileExcluder($fileHelper, new EmptyStubFilesProvider(), [$path]);
+			$fileExcluder = new FileExcluder($fileHelper, [$path]);
 			$isExcluded = $fileExcluder->isExcludedFromAnalysing($error->getFilePath());
 			if (!$isExcluded && $error->getTraitFilePath() !== null) {
 				return $fileExcluder->isExcludedFromAnalysing($error->getTraitFilePath());
diff --git a/src/File/FileExcluder.php b/src/File/FileExcluder.php
index ff4f63b613..e44dedee53 100644
--- a/src/File/FileExcluder.php
+++ b/src/File/FileExcluder.php
@@ -2,8 +2,6 @@
 
 namespace PHPStan\File;
 
-use PHPStan\PhpDoc\StubFilesProvider;
-use function array_merge;
 use function fnmatch;
 use function in_array;
 use function preg_match;
@@ -36,11 +34,10 @@ class FileExcluder
 	 */
 	public function __construct(
 		FileHelper $fileHelper,
-		StubFilesProvider $stubFilesProvider,
 		array $analyseExcludes,
 	)
 	{
-		foreach (array_merge($analyseExcludes, $stubFilesProvider->getStubFiles()) as $exclude) {
+		foreach ($analyseExcludes as $exclude) {
 			$len = strlen($exclude);
 			$trailingDirSeparator = ($len > 0 && in_array($exclude[$len - 1], ['\\', '/'], true));
 
diff --git a/src/File/FileExcluderFactory.php b/src/File/FileExcluderFactory.php
index 26976a3dfb..d5274001b9 100644
--- a/src/File/FileExcluderFactory.php
+++ b/src/File/FileExcluderFactory.php
@@ -2,6 +2,7 @@
 
 namespace PHPStan\File;
 
+use PHPStan\PhpDoc\StubFilesProvider;
 use function array_key_exists;
 use function array_merge;
 use function array_unique;
@@ -16,6 +17,7 @@ class FileExcluderFactory
 	 */
 	public function __construct(
 		private FileExcluderRawFactory $fileExcluderRawFactory,
+		private StubFilesProvider $stubFilesProvider,
 		private array $obsoleteExcludesAnalyse,
 		private ?array $excludePaths,
 	)
@@ -25,7 +27,7 @@ public function __construct(
 	public function createAnalyseFileExcluder(): FileExcluder
 	{
 		if ($this->excludePaths === null) {
-			return $this->fileExcluderRawFactory->create($this->obsoleteExcludesAnalyse);
+			return $this->fileExcluderRawFactory->create(array_merge($this->obsoleteExcludesAnalyse, $this->stubFilesProvider->getStubFiles()));
 		}
 
 		$paths = [];
@@ -36,7 +38,7 @@ public function createAnalyseFileExcluder(): FileExcluder
 			$paths = array_merge($paths, $this->excludePaths['analyseAndScan']);
 		}
 
-		return $this->fileExcluderRawFactory->create(array_values(array_unique($paths)));
+		return $this->fileExcluderRawFactory->create(array_merge(array_values(array_unique($paths)), $this->stubFilesProvider->getStubFiles()));
 	}
 
 	public function createScanFileExcluder(): FileExcluder
diff --git a/src/PhpDoc/EmptyStubFilesProvider.php b/src/PhpDoc/EmptyStubFilesProvider.php
deleted file mode 100644
index 0f5bb2124d..0000000000
--- a/src/PhpDoc/EmptyStubFilesProvider.php
+++ /dev/null
@@ -1,18 +0,0 @@
-<?php declare(strict_types = 1);
-
-namespace PHPStan\PhpDoc;
-
-class EmptyStubFilesProvider implements StubFilesProvider
-{
-
-	public function getStubFiles(): array
-	{
-		return [];
-	}
-
-	public function getProjectStubFiles(): array
-	{
-		return [];
-	}
-
-}
diff --git a/tests/PHPStan/File/FileExcluderTest.php b/tests/PHPStan/File/FileExcluderTest.php
index 439a900cfe..eebe8236e6 100644
--- a/tests/PHPStan/File/FileExcluderTest.php
+++ b/tests/PHPStan/File/FileExcluderTest.php
@@ -2,7 +2,6 @@
 
 namespace PHPStan\File;
 
-use PHPStan\PhpDoc\EmptyStubFilesProvider;
 use PHPStan\Testing\PHPStanTestCase;
 
 class FileExcluderTest extends PHPStanTestCase
@@ -20,7 +19,7 @@ public function testFilesAreExcludedFromAnalysingOnWindows(
 	{
 		$this->skipIfNotOnWindows();
 
-		$fileExcluder = new FileExcluder($this->getFileHelper(), new EmptyStubFilesProvider(), $analyseExcludes);
+		$fileExcluder = new FileExcluder($this->getFileHelper(), $analyseExcludes);
 
 		$this->assertSame($isExcluded, $fileExcluder->isExcludedFromAnalysing($filePath));
 	}
@@ -128,7 +127,7 @@ public function testFilesAreExcludedFromAnalysingOnUnix(
 	{
 		$this->skipIfNotOnUnix();
 
-		$fileExcluder = new FileExcluder($this->getFileHelper(), new EmptyStubFilesProvider(), $analyseExcludes);
+		$fileExcluder = new FileExcluder($this->getFileHelper(), $analyseExcludes);
 
 		$this->assertSame($isExcluded, $fileExcluder->isExcludedFromAnalysing($filePath));
 	}