From 4df2c1589b34cd0365c72e9845fc169ebd453f91 Mon Sep 17 00:00:00 2001 From: Benjamin Linard <22132778+blinard-BIOINFO@users.noreply.github.com> Date: Wed, 17 Jul 2024 11:45:08 +0200 Subject: [PATCH] Update README.md --- README.md | 12 +++++++++++- 1 file changed, 11 insertions(+), 1 deletion(-) diff --git a/README.md b/README.md index d4e0809..36b65fe 100644 --- a/README.md +++ b/README.md @@ -10,7 +10,17 @@ EPIK is a program for rapid alignment-free phylogenetic placement, the successor of [RAPPAS](https://github.com/phylo42/RAPPAS). -## Installation +## Installation via Bioconda +It is advised to install the package in a new environement, because our C++ dependencies are strict and may clash with other packages requiring, for instance, libboost. +We also recommend to use `mamba, which is more faster in solving environment dependencies. +``` +conda create -n epik +conda activate epik +conda config --set channel_priority strict +mamba install ipk epik +``` + +## Installation via compilation ### Prerequisites