From 06d65bd27c438c01b25f96a758cbe73cdaa79fe8 Mon Sep 17 00:00:00 2001 From: Renaud Michotte Date: Wed, 24 Aug 2022 15:59:46 +0200 Subject: [PATCH] modules: create `export` module MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit * Create `export` module extension. * Adds tests to check this extension and sample blueprint. Co-authored-by: Renaud Michotte Co-Authored-by: Johnny MarieĢthoz --- .github/workflows/tests.yml | 4 +- poetry.lock | 1274 ++++++++++++------ pyproject.toml | 10 +- rero_invenio_base/modules/__init__.py | 19 + rero_invenio_base/modules/export/__init__.py | 23 + rero_invenio_base/modules/export/config.py | 61 + rero_invenio_base/modules/export/ext.py | 40 + rero_invenio_base/modules/export/proxies.py | 27 + rero_invenio_base/modules/export/views.py | 133 ++ run-tests.sh | 14 +- tests/conftest.py | 8 + tests/test_ext.py | 61 + 12 files changed, 1277 insertions(+), 397 deletions(-) create mode 100644 rero_invenio_base/modules/__init__.py create mode 100644 rero_invenio_base/modules/export/__init__.py create mode 100644 rero_invenio_base/modules/export/config.py create mode 100644 rero_invenio_base/modules/export/ext.py create mode 100644 rero_invenio_base/modules/export/proxies.py create mode 100644 rero_invenio_base/modules/export/views.py create mode 100644 tests/test_ext.py diff --git a/.github/workflows/tests.yml b/.github/workflows/tests.yml index a23cb26..e768944 100644 --- a/.github/workflows/tests.yml +++ b/.github/workflows/tests.yml @@ -22,10 +22,10 @@ jobs: - name: Checkout uses: actions/checkout@v2 - - name: Set up Python ${{ matrix.python-version }} + - name: Set up Python 3.9 uses: actions/setup-python@v3 with: - python-version: ${{ matrix.python-version }} + python-version: 3.9 - name: Install Poetry uses: snok/install-poetry@v1 diff --git a/poetry.lock b/poetry.lock index 179f577..9d96561 100644 --- a/poetry.lock +++ b/poetry.lock @@ -8,11 +8,11 @@ python-versions = "*" [[package]] name = "alembic" -version = "1.7.7" +version = "1.8.1" description = "A database migration tool for SQLAlchemy." category = "main" optional = false -python-versions = ">=3.6" +python-versions = ">=3.7" [package.dependencies] Mako = "*" @@ -21,6 +21,17 @@ SQLAlchemy = ">=1.3.0" [package.extras] tz = ["python-dateutil"] +[[package]] +name = "amqp" +version = "5.1.1" +description = "Low-level AMQP client for Python (fork of amqplib)." +category = "main" +optional = false +python-versions = ">=3.6" + +[package.dependencies] +vine = ">=5.0.0" + [[package]] name = "appnope" version = "0.1.3" @@ -29,9 +40,20 @@ category = "dev" optional = false python-versions = "*" +[[package]] +name = "arrow" +version = "1.2.2" +description = "Better dates & times for Python" +category = "main" +optional = false +python-versions = ">=3.6" + +[package.dependencies] +python-dateutil = ">=2.7.0" + [[package]] name = "asttokens" -version = "2.0.5" +version = "2.0.8" description = "Annotate AST trees with source code positions" category = "dev" optional = false @@ -41,11 +63,19 @@ python-versions = "*" six = "*" [package.extras] -test = ["astroid", "pytest"] +test = ["astroid (<=2.5.3)", "pytest"] + +[[package]] +name = "async-timeout" +version = "4.0.2" +description = "Timeout context manager for asyncio programs" +category = "main" +optional = false +python-versions = ">=3.6" [[package]] name = "atomicwrites" -version = "1.4.0" +version = "1.4.1" description = "Atomic file writes." category = "dev" optional = false @@ -53,17 +83,17 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" [[package]] name = "attrs" -version = "21.4.0" +version = "22.1.0" description = "Classes Without Boilerplate" -category = "dev" +category = "main" optional = false -python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" +python-versions = ">=3.5" [package.extras] -dev = ["coverage[toml] (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "mypy", "pytest-mypy-plugins", "zope.interface", "furo", "sphinx", "sphinx-notfound-page", "pre-commit", "cloudpickle"] +dev = ["coverage[toml] (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "mypy (>=0.900,!=0.940)", "pytest-mypy-plugins", "zope.interface", "furo", "sphinx", "sphinx-notfound-page", "pre-commit", "cloudpickle"] docs = ["furo", "sphinx", "zope.interface", "sphinx-notfound-page"] -tests = ["coverage[toml] (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "mypy", "pytest-mypy-plugins", "zope.interface", "cloudpickle"] -tests_no_zope = ["coverage[toml] (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "mypy", "pytest-mypy-plugins", "cloudpickle"] +tests = ["coverage[toml] (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "mypy (>=0.900,!=0.940)", "pytest-mypy-plugins", "zope.interface", "cloudpickle"] +tests_no_zope = ["coverage[toml] (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "mypy (>=0.900,!=0.940)", "pytest-mypy-plugins", "cloudpickle"] [[package]] name = "autoflake" @@ -78,9 +108,9 @@ pyflakes = ">=1.1.0" [[package]] name = "babel" -version = "2.10.1" +version = "2.10.3" description = "Internationalization utilities" -category = "dev" +category = "main" optional = false python-versions = ">=3.6" @@ -95,18 +125,58 @@ category = "dev" optional = false python-versions = "*" +[[package]] +name = "base32-lib" +version = "1.0.2" +description = "Small library to generate, encode and decode random base32 strings." +category = "main" +optional = false +python-versions = "*" + +[package.dependencies] +six = ">=1.10" + +[package.extras] +all = ["Sphinx (>=1.4.2)", "check-manifest (>=0.25)", "coverage (>=4.0)", "isort (>=4.2.2)", "pydocstyle (>=1.0)", "pytest-cov (>=1.8.0)", "pytest-pep8 (>=1.0.6)", "pytest-runner (>=2.7.0)", "pytest (>=3.6.0)"] +docs = ["Sphinx (>=1.4.2)"] +tests = ["check-manifest (>=0.25)", "coverage (>=4.0)", "isort (>=4.2.2)", "pydocstyle (>=1.0)", "pytest-cov (>=1.8.0)", "pytest-pep8 (>=1.0.6)", "pytest-runner (>=2.7.0)", "pytest (>=3.6.0)"] + +[[package]] +name = "billiard" +version = "3.6.4.0" +description = "Python multiprocessing fork with improvements and bugfixes" +category = "main" +optional = false +python-versions = "*" + +[[package]] +name = "bleach" +version = "5.0.1" +description = "An easy safelist-based HTML-sanitizing tool." +category = "main" +optional = false +python-versions = ">=3.7" + +[package.dependencies] +six = ">=1.9.0" +webencodings = "*" + +[package.extras] +css = ["tinycss2 (>=1.1.0,<1.2)"] +dev = ["build (==0.8.0)", "flake8 (==4.0.1)", "hashin (==0.17.0)", "pip-tools (==6.6.2)", "pytest (==7.1.2)", "Sphinx (==4.3.2)", "tox (==3.25.0)", "twine (==4.0.1)", "wheel (==0.37.1)", "black (==22.3.0)", "mypy (==0.961)"] + [[package]] name = "blinker" -version = "1.4" +version = "1.5" description = "Fast, simple object-to-object and broadcast signaling" category = "main" optional = false -python-versions = "*" +python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" [[package]] name = "build" -version = "0.7.0" -description = "A simple, correct PEP517 package builder" +version = "0.8.0" +description = "A simple, correct PEP 517 build frontend" category = "dev" optional = false python-versions = ">=3.6" @@ -115,29 +185,80 @@ python-versions = ">=3.6" colorama = {version = "*", markers = "os_name == \"nt\""} packaging = ">=19.0" pep517 = ">=0.9.1" -tomli = ">=1.0.0" +tomli = {version = ">=1.0.0", markers = "python_version < \"3.11\""} [package.extras] -docs = ["furo (>=2020.11.19b18)", "sphinx (>=3.0,<4.0)", "sphinx-argparse-cli (>=1.5)", "sphinx-autodoc-typehints (>=1.10)"] -test = ["filelock (>=3)", "pytest (>=6.2.4)", "pytest-cov (>=2)", "pytest-mock (>=2)", "pytest-rerunfailures (>=9.1)", "pytest-xdist (>=1.34)", "setuptools (>=42.0.0)", "toml (>=0.10.0)", "wheel (>=0.36.0)"] -typing = ["importlib-metadata (>=4.6.4)", "mypy (==0.910)", "typing-extensions (>=3.7.4.3)"] virtualenv = ["virtualenv (>=20.0.35)"] +typing = ["typing-extensions (>=3.7.4.3)", "mypy (==0.950)", "importlib-metadata (>=4.6.4)"] +test = ["setuptools (>=56.0.0)", "setuptools (>=42.0.0)", "wheel (>=0.36.0)", "toml (>=0.10.0)", "pytest-xdist (>=1.34)", "pytest-rerunfailures (>=9.1)", "pytest-mock (>=2)", "pytest-cov (>=2.12)", "pytest (>=6.2.4)", "filelock (>=3)"] +docs = ["sphinx-autodoc-typehints (>=1.10)", "sphinx-argparse-cli (>=1.5)", "sphinx (>=4.0,<5.0)", "furo (>=2021.08.31)"] + +[[package]] +name = "celery" +version = "5.2.7" +description = "Distributed Task Queue." +category = "main" +optional = false +python-versions = ">=3.7" + +[package.dependencies] +billiard = ">=3.6.4.0,<4.0" +click = ">=8.0.3,<9.0" +click-didyoumean = ">=0.0.3" +click-plugins = ">=1.1.1" +click-repl = ">=0.2.0" +kombu = ">=5.2.3,<6.0" +pytz = ">=2021.3" +vine = ">=5.0.0,<6.0" + +[package.extras] +arangodb = ["pyArango (>=1.3.2)"] +auth = ["cryptography"] +azureblockblob = ["azure-storage-blob (==12.9.0)"] +brotli = ["brotli (>=1.0.0)", "brotlipy (>=0.7.0)"] +cassandra = ["cassandra-driver (<3.21.0)"] +consul = ["python-consul2"] +cosmosdbsql = ["pydocumentdb (==2.3.2)"] +couchbase = ["couchbase (>=3.0.0)"] +couchdb = ["pycouchdb"] +django = ["Django (>=1.11)"] +dynamodb = ["boto3 (>=1.9.178)"] +elasticsearch = ["elasticsearch"] +eventlet = ["eventlet (>=0.32.0)"] +gevent = ["gevent (>=1.5.0)"] +librabbitmq = ["librabbitmq (>=1.5.0)"] +memcache = ["pylibmc"] +mongodb = ["pymongo[srv] (>=3.11.1)"] +msgpack = ["msgpack"] +pymemcache = ["python-memcached"] +pyro = ["pyro4"] +pytest = ["pytest-celery"] +redis = ["redis (>=3.4.1,!=4.0.0,!=4.0.1)"] +s3 = ["boto3 (>=1.9.125)"] +slmq = ["softlayer-messaging (>=1.0.3)"] +solar = ["ephem"] +sqlalchemy = ["sqlalchemy"] +sqs = ["kombu"] +tblib = ["tblib (>=1.3.0)", "tblib (>=1.5.0)"] +yaml = ["PyYAML (>=3.10)"] +zookeeper = ["kazoo (>=1.3.1)"] +zstd = ["zstandard"] [[package]] name = "certifi" -version = "2021.10.8" +version = "2022.6.15" description = "Python package for providing Mozilla's CA Bundle." category = "main" optional = false -python-versions = "*" +python-versions = ">=3.6" [[package]] name = "charset-normalizer" -version = "2.0.12" +version = "2.1.1" description = "The Real First Universal Charset Detector. Open, modern and actively maintained alternative to Chardet." category = "dev" optional = false -python-versions = ">=3.5.0" +python-versions = ">=3.6.0" [package.extras] unicode_backport = ["unicodedata2"] @@ -168,9 +289,47 @@ python-versions = ">=3.7" [package.dependencies] colorama = {version = "*", markers = "platform_system == \"Windows\""} +[[package]] +name = "click-didyoumean" +version = "0.3.0" +description = "Enables git-like *did-you-mean* feature in click" +category = "main" +optional = false +python-versions = ">=3.6.2,<4.0.0" + +[package.dependencies] +click = ">=7" + +[[package]] +name = "click-plugins" +version = "1.1.1" +description = "An extension module for click to enable registering CLI commands via setuptools entry-points." +category = "main" +optional = false +python-versions = "*" + +[package.dependencies] +click = ">=4.0" + +[package.extras] +dev = ["pytest (>=3.6)", "pytest-cov", "wheel", "coveralls"] + +[[package]] +name = "click-repl" +version = "0.2.0" +description = "REPL plugin for Click" +category = "main" +optional = false +python-versions = "*" + +[package.dependencies] +click = "*" +prompt-toolkit = "*" +six = "*" + [[package]] name = "colorama" -version = "0.4.4" +version = "0.4.5" description = "Cross-platform colored terminal text." category = "main" optional = false @@ -198,19 +357,33 @@ category = "dev" optional = false python-versions = ">=3.5" +[[package]] +name = "deprecated" +version = "1.2.13" +description = "Python @deprecated decorator to deprecate old python classes, functions or methods." +category = "main" +optional = false +python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" + +[package.dependencies] +wrapt = ">=1.10,<2" + +[package.extras] +dev = ["tox", "bump2version (<1)", "sphinx (<2)", "importlib-metadata (<3)", "importlib-resources (<4)", "configparser (<5)", "sphinxcontrib-websupport (<2)", "zipp (<2)", "PyTest (<5)", "PyTest-Cov (<2.6)", "pytest", "pytest-cov"] + [[package]] name = "docker-services-cli" -version = "0.4.1" +version = "0.4.2" description = "\"Python module to ease the creation and management of external services.\"" category = "dev" optional = false -python-versions = ">=3.6" +python-versions = ">=3.7" [package.dependencies] click = ">=7.0" [package.extras] -tests = ["check-manifest (>=0.42)", "pytest-cov (>=2.10.1)", "pytest-isort (>=1.2.0)", "pytest-pycodestyle (>=2.2.0)", "pytest-pydocstyle (>=2.2.0)", "pytest (>=6,<7)", "Sphinx (>=4.4.0,<5)"] +tests = ["sphinx (>=4.5)", "pytest (>=6,<7)", "pytest-pydocstyle (>=2.2.0)", "pytest-isort (>=1.2.0)", "pytest-cov (>=2.10.1)", "check-manifest (>=0.42)", "pytest-black (==0.3.9)"] [[package]] name = "docutils" @@ -222,7 +395,7 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" [[package]] name = "dparse" -version = "0.5.1" +version = "0.5.2" description = "A parser for Python dependency files" category = "dev" optional = false @@ -230,11 +403,11 @@ python-versions = ">=3.5" [package.dependencies] packaging = "*" -pyyaml = "*" toml = "*" [package.extras] pipenv = ["pipenv"] +conda = ["pyyaml"] [[package]] name = "elasticsearch" @@ -272,7 +445,7 @@ develop = ["mock", "pytest (>=3.0.0)", "pytest-cov", "pytest-mock (<3.0.0)", "py [[package]] name = "executing" -version = "0.8.3" +version = "0.10.0" description = "Get the currently executing AST node of a frame, and other information" category = "dev" optional = false @@ -280,7 +453,7 @@ python-versions = "*" [[package]] name = "flask" -version = "2.1.2" +version = "2.2.2" description = "A simple framework for building complex web applications." category = "main" optional = false @@ -291,7 +464,7 @@ click = ">=8.0" importlib-metadata = {version = ">=3.6.0", markers = "python_version < \"3.10\""} itsdangerous = ">=2.0" Jinja2 = ">=3.0" -Werkzeug = ">=2.0" +Werkzeug = ">=2.2.2" [package.extras] async = ["asgiref (>=3.2)"] @@ -311,6 +484,47 @@ Flask = ">=0.10" Flask-SQLAlchemy = "*" SQLAlchemy = "*" +[[package]] +name = "flask-babelex" +version = "0.9.4" +description = "Adds i18n/l10n support to Flask applications" +category = "main" +optional = false +python-versions = "*" + +[package.dependencies] +Babel = ">=1.0" +Flask = "*" +Jinja2 = ">=2.5" +speaklater = ">=1.2" + +[[package]] +name = "flask-celeryext" +version = "0.4.3" +description = "\"Flask-CeleryExt is a simple integration layer between Celery and Flask.\"" +category = "main" +optional = false +python-versions = ">=3.6" + +[package.dependencies] +celery = ">=5.1.0" +Flask = ">=1.1" + +[package.extras] +tests = ["Sphinx (>=4.2.0)", "redis (>=4.1.4)", "pytest (>=6,<7)", "pytest-pydocstyle (>=2.2.0)", "pytest-black (>=0.3.12)", "pytest-mock (>=2.0.0)", "pytest-isort (>=3.0.0)", "pytest-flask (>=1.2.0)", "pytest-cov (>=3.0.0)", "msgpack-python (>=0.5.6)", "docker-services-cli (>=0.4.0)", "coverage (>=5.3,<6)", "check-manifest (>=0.42)"] + +[[package]] +name = "flask-cors" +version = "3.0.10" +description = "A Flask extension adding a decorator for CORS support" +category = "main" +optional = false +python-versions = "*" + +[package.dependencies] +Flask = ">=0.9" +Six = "*" + [[package]] name = "flask-sqlalchemy" version = "2.5.1" @@ -323,9 +537,20 @@ python-versions = ">= 2.7, != 3.0.*, != 3.1.*, != 3.2.*, != 3.3.*" Flask = ">=0.10" SQLAlchemy = ">=0.8.0" +[[package]] +name = "ftfy" +version = "6.1.1" +description = "Fixes mojibake and other problems with Unicode, after the fact" +category = "main" +optional = false +python-versions = ">=3.7,<4" + +[package.dependencies] +wcwidth = ">=0.2.5" + [[package]] name = "greenlet" -version = "1.1.2" +version = "1.1.3" description = "Lightweight in-process concurrent programming" category = "main" optional = false @@ -344,7 +569,7 @@ python-versions = ">=3.5" [[package]] name = "imagesize" -version = "1.3.0" +version = "1.4.1" description = "Getting image size from png/jpeg/jpeg2000/gif file" category = "dev" optional = false @@ -352,7 +577,7 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" [[package]] name = "importlib-metadata" -version = "4.11.3" +version = "4.12.0" description = "Read metadata from Python packages" category = "main" optional = false @@ -364,11 +589,11 @@ zipp = ">=0.5" [package.extras] docs = ["sphinx", "jaraco.packaging (>=9)", "rst.linker (>=1.9)"] perf = ["ipython"] -testing = ["pytest (>=6)", "pytest-checkdocs (>=2.4)", "pytest-flake8", "pytest-cov", "pytest-enabler (>=1.0.1)", "packaging", "pyfakefs", "flufl.flake8", "pytest-perf (>=0.9.2)", "pytest-black (>=0.3.7)", "pytest-mypy (>=0.9.1)", "importlib-resources (>=1.3)"] +testing = ["pytest (>=6)", "pytest-checkdocs (>=2.4)", "pytest-flake8", "pytest-cov", "pytest-enabler (>=1.3)", "packaging", "pyfakefs", "flufl.flake8", "pytest-perf (>=0.9.2)", "pytest-black (>=0.3.7)", "pytest-mypy (>=0.9.1)", "importlib-resources (>=1.3)"] [[package]] name = "importlib-resources" -version = "5.7.1" +version = "5.9.0" description = "Read resources from Python packages" category = "main" optional = false @@ -378,8 +603,8 @@ python-versions = ">=3.7" zipp = {version = ">=3.1.0", markers = "python_version < \"3.10\""} [package.extras] -docs = ["sphinx", "jaraco.packaging (>=9)", "rst.linker (>=1.9)"] -testing = ["pytest (>=6)", "pytest-checkdocs (>=2.4)", "pytest-flake8", "pytest-cov", "pytest-enabler (>=1.0.1)", "pytest-black (>=0.3.7)", "pytest-mypy (>=0.9.1)"] +docs = ["sphinx", "jaraco.packaging (>=9)", "rst.linker (>=1.9)", "jaraco.tidelift (>=1.4)"] +testing = ["pytest (>=6)", "pytest-checkdocs (>=2.4)", "pytest-flake8", "pytest-cov", "pytest-enabler (>=1.3)", "pytest-black (>=0.3.7)", "pytest-mypy (>=0.9.1)"] [[package]] name = "iniconfig" @@ -391,11 +616,11 @@ python-versions = "*" [[package]] name = "invenio-base" -version = "1.2.11" +version = "1.2.13" description = "\"Base package for building Invenio application factories.\"" category = "main" optional = false -python-versions = ">=3.6" +python-versions = ">=3.7" [package.dependencies] blinker = ">=1.4" @@ -407,7 +632,27 @@ MarkupSafe = ">=0.23" Werkzeug = ">=1.0.1,<3.0" [package.extras] -tests = ["pytest-invenio (>=1.4.2)", "sphinx (>=4.2.0)"] +tests = ["pytest-black (>=0.3.0,<0.3.10)", "pytest-invenio (>=1.4.2)", "sphinx (>=4.2.0)"] + +[[package]] +name = "invenio-celery" +version = "1.2.4" +description = "Celery module for Invenio." +category = "main" +optional = false +python-versions = "*" + +[package.dependencies] +celery = ">=5.1.0,<5.3" +Flask-CeleryExt = ">=0.3.4" +invenio-base = ">=1.2.5" +msgpack = ">=0.6.2" +redis = ">=2.10.0" + +[package.extras] +all = ["Sphinx (==4.2.0)", "pytest-invenio (>=1.4.0)"] +docs = ["Sphinx (==4.2.0)"] +tests = ["pytest-invenio (>=1.4.0)"] [[package]] name = "invenio-db" @@ -430,6 +675,142 @@ mysql = ["pymysql (>=0.10.1)"] postgresql = ["psycopg2-binary (>=2.8.6)"] tests = ["cryptography (>=2.1.4)", "pytest-invenio (>=1.4.5)", "Sphinx (==4.2.0)"] +[[package]] +name = "invenio-i18n" +version = "1.3.2" +description = "\"Invenio internationalization (I18N) module.\"" +category = "main" +optional = false +python-versions = ">=3.7" + +[package.dependencies] +Babel = ">=2.8" +Flask-BabelEx = ">=0.9.4" +invenio-base = ">=1.2.5" + +[package.extras] +tests = ["invenio-accounts (>=1.3.0)", "invenio-assets (>=1.2.0)", "invenio-db (>=1.0.8)", "pytest-invenio (>=1.4.2)", "Sphinx (>=4.2.0)"] + +[[package]] +name = "invenio-indexer" +version = "1.2.7" +description = "Record indexer for Invenio." +category = "main" +optional = false +python-versions = "*" + +[package.dependencies] +invenio-db = ">=1.0.14" +invenio-pidstore = ">=1.2.0" +invenio-records = ">=1.4.0" +pytz = ">=2016.4" + +[package.extras] +all = ["Sphinx (>=4.2.0,<5)", "attrs (>=17.4.0)", "pytest-invenio (>=1.4.6)", "redis (>=3.4.0)"] +docs = ["Sphinx (>=4.2.0,<5)"] +elasticsearch6 = ["invenio-search[elasticsearch6] (>=1.4.0)"] +elasticsearch7 = ["invenio-search[elasticsearch7] (>=1.4.0)"] +tests = ["attrs (>=17.4.0)", "pytest-invenio (>=1.4.6)", "redis (>=3.4.0)"] + +[[package]] +name = "invenio-pidstore" +version = "1.2.3" +description = "Invenio module that stores and registers persistent identifiers." +category = "main" +optional = false +python-versions = "*" + +[package.dependencies] +base32-lib = ">=1.0.1" +importlib-metadata = ">=4.4" +importlib-resources = ">=5.0" +invenio-base = ">=1.2.5" +invenio-i18n = ">=1.2.0" + +[package.extras] +admin = ["invenio-admin (>=1.2.0)"] +all = ["invenio-admin (>=1.2.0)", "datacite (>=0.1.0)", "Sphinx (>=4.2.0)", "Flask-Menu (>=0.5.1)", "invenio-access (>=1.0.0)", "invenio-accounts (>=1.4.0)", "mock (>=3.0.0)", "pytest-invenio (>=1.4.0)", "SQLAlchemy-Continuum (>=1.3.11)"] +datacite = ["datacite (>=0.1.0)"] +docs = ["Sphinx (>=4.2.0)"] +mysql = ["invenio-db[mysql] (>=1.0.9)"] +postgresql = ["invenio-db[postgresql] (>=1.0.9)"] +sqlite = ["invenio-db (>=1.0.9)"] +tests = ["Flask-Menu (>=0.5.1)", "invenio-admin (>=1.2.0)", "invenio-access (>=1.0.0)", "invenio-accounts (>=1.4.0)", "mock (>=3.0.0)", "pytest-invenio (>=1.4.0)", "SQLAlchemy-Continuum (>=1.3.11)"] + +[[package]] +name = "invenio-records" +version = "1.7.4" +description = "Invenio-Records is a metadata storage module." +category = "main" +optional = false +python-versions = ">=3.7" + +[package.dependencies] +arrow = ">=0.16.0" +invenio-celery = ">=1.2.4" +invenio-i18n = ">=1.3.2" +jsonpatch = ">=1.26" +jsonref = ">=0.2" +jsonresolver = ">=0.3.1" +jsonschema = ">=4.3.0,<5.0.0" + +[package.extras] +admin = ["invenio-admin (>=1.2.1)"] +mysql = ["invenio-db[versioning,mysql] (>=1.0.14,<2.0)"] +postgresql = ["invenio-db[postgresql,versioning] (>=1.0.14,<2.0)"] +sqlite = ["invenio-db[versioning] (>=1.0.14,<2.0)"] +tests = ["pytest-black (>=0.3.0,<0.3.10)", "invenio-admin (>=1.2.1)", "pytest-invenio (>=1.4.6)", "sphinx (>=4.5)"] + +[[package]] +name = "invenio-records-rest" +version = "1.9.0" +description = "REST API for invenio-records." +category = "main" +optional = false +python-versions = "*" + +[package.dependencies] +bleach = ">=2.1.3" +ftfy = ">=4.4.3" +invenio-base = ">=1.2.5" +invenio-i18n = ">=1.3.0" +invenio-indexer = ">=1.2.0" +invenio-pidstore = ">=1.2.1" +invenio-records = ">=1.6.0" +invenio-rest = ">=1.2.4" + +[package.extras] +all = ["citeproc-py (>=0.6.0)", "citeproc-py-styles (>=0.1.3)", "datacite (>=1.0.1)", "Sphinx (>=4.2.0)", "dcxml (>=0.1.2)", "pyld (>=1.0.5,<2)", "Flask-Login (>=0.3.2)", "invenio-config (>=1.0.2)", "invenio-db[all] (>=1.0.9)", "pytest-invenio (>=1.4.0)"] +citeproc = ["citeproc-py (>=0.6.0)", "citeproc-py-styles (>=0.1.3)"] +datacite = ["datacite (>=1.0.1)"] +docs = ["Sphinx (>=4.2.0)"] +dublincore = ["dcxml (>=0.1.2)"] +elasticsearch5 = ["invenio-search[elasticsearch5] (>=1.4.2)"] +elasticsearch6 = ["invenio-search[elasticsearch6] (>=1.4.2)"] +elasticsearch7 = ["invenio-search[elasticsearch7] (>=1.4.2)"] +jsonld = ["pyld (>=1.0.5,<2)"] +tests = ["Flask-Login (>=0.3.2)", "invenio-config (>=1.0.2)", "invenio-db[all] (>=1.0.9)", "pytest-invenio (>=1.4.0)"] + +[[package]] +name = "invenio-rest" +version = "1.2.8" +description = "REST API module for Invenio." +category = "main" +optional = false +python-versions = "*" + +[package.dependencies] +Flask-CORS = ">=2.1.0" +invenio-base = ">=1.2.5" +itsdangerous = ">=1.1,<2.1" +marshmallow = ">=2.15.2" +webargs = ">=5.5.0,<6.0.0" + +[package.extras] +all = ["Sphinx (==4.2.0)", "xmltodict (>=0.11.0)", "pytest-invenio (>=1.4.0)"] +docs = ["Sphinx (==4.2.0)"] +tests = ["xmltodict (>=0.11.0)", "pytest-invenio (>=1.4.0)", "Sphinx (==4.2.0)"] + [[package]] name = "invenio-search" version = "1.4.2" @@ -454,7 +835,7 @@ tests = ["invenio-db[versioning] (>=1.0.0)", "mock (>=1.3.0)", "pytest-invenio ( [[package]] name = "ipython" -version = "8.3.0" +version = "8.4.0" description = "IPython: Productive Interactive Computing" category = "dev" optional = false @@ -557,9 +938,81 @@ category = "main" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" +[[package]] +name = "jsonref" +version = "0.2" +description = "An implementation of JSON Reference for Python" +category = "main" +optional = false +python-versions = "*" + +[[package]] +name = "jsonresolver" +version = "0.3.1" +description = "JSON data resolver with support for plugins." +category = "main" +optional = false +python-versions = "*" + +[package.dependencies] +pluggy = ">=0.10.0,<1.0" +six = ">=1.12.0" +werkzeug = ">=1.0.0" + +[package.extras] +all = ["Sphinx (>=1.5.1)", "jsonref (>=0.1)", "jsonschema (>=2.5.1)", "check-manifest (>=0.25)", "coverage (>=4.0)", "isort (>=4.2.2)", "mock (>=1.3.0)", "pydocstyle (>=1.0.0)", "pytest-cache (>=1.0)", "pytest-cov (>=2.8.1)", "pytest-pep8 (>=1.0.6)", "pytest (>=3.6.0)", "requests (>=2.7.0)"] +docs = ["Sphinx (>=1.5.1)"] +jsonref = ["jsonref (>=0.1)"] +jsonschema = ["jsonschema (>=2.5.1)"] +tests = ["check-manifest (>=0.25)", "coverage (>=4.0)", "isort (>=4.2.2)", "mock (>=1.3.0)", "pydocstyle (>=1.0.0)", "pytest-cache (>=1.0)", "pytest-cov (>=2.8.1)", "pytest-pep8 (>=1.0.6)", "pytest (>=3.6.0)", "requests (>=2.7.0)"] + +[[package]] +name = "jsonschema" +version = "4.14.0" +description = "An implementation of JSON Schema validation for Python" +category = "main" +optional = false +python-versions = ">=3.7" + +[package.dependencies] +attrs = ">=17.4.0" +pyrsistent = ">=0.14.0,<0.17.0 || >0.17.0,<0.17.1 || >0.17.1,<0.17.2 || >0.17.2" + +[package.extras] +format = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339-validator", "rfc3987", "uri-template", "webcolors (>=1.11)"] +format-nongpl = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339-validator", "rfc3986-validator (>0.1.0)", "uri-template", "webcolors (>=1.11)"] + +[[package]] +name = "kombu" +version = "5.2.4" +description = "Messaging library for Python." +category = "main" +optional = false +python-versions = ">=3.7" + +[package.dependencies] +amqp = ">=5.0.9,<6.0.0" +vine = "*" + +[package.extras] +azureservicebus = ["azure-servicebus (>=7.0.0)"] +azurestoragequeues = ["azure-storage-queue"] +consul = ["python-consul (>=0.6.0)"] +librabbitmq = ["librabbitmq (>=2.0.0)"] +mongodb = ["pymongo (>=3.3.0,<3.12.1)"] +msgpack = ["msgpack"] +pyro = ["pyro4"] +qpid = ["qpid-python (>=0.26)", "qpid-tools (>=0.26)"] +redis = ["redis (>=3.4.1,!=4.0.0,!=4.0.1)"] +slmq = ["softlayer-messaging (>=1.0.3)"] +sqlalchemy = ["sqlalchemy"] +sqs = ["boto3 (>=1.9.12)", "pycurl (>=7.44.1,<7.45.0)", "urllib3 (>=1.26.7)"] +yaml = ["PyYAML (>=3.10)"] +zookeeper = ["kazoo (>=1.3.1)"] + [[package]] name = "mako" -version = "1.2.0" +version = "1.2.1" description = "A super-fast templating language that borrows the best ideas from the existing templating languages." category = "main" optional = false @@ -581,9 +1034,26 @@ category = "main" optional = false python-versions = ">=3.7" +[[package]] +name = "marshmallow" +version = "3.17.1" +description = "A lightweight library for converting complex datatypes to and from native Python datatypes." +category = "main" +optional = false +python-versions = ">=3.7" + +[package.dependencies] +packaging = ">=17.0" + +[package.extras] +dev = ["pytest", "pytz", "simplejson", "mypy (==0.971)", "flake8 (==5.0.4)", "flake8-bugbear (==22.8.22)", "pre-commit (>=2.4,<3.0)", "tox"] +docs = ["sphinx (==5.1.1)", "sphinx-issues (==3.0.1)", "alabaster (==0.7.12)", "sphinx-version-warning (==1.1.2)", "autodocsumm (==0.2.9)"] +lint = ["mypy (==0.971)", "flake8 (==5.0.4)", "flake8-bugbear (==22.8.22)", "pre-commit (>=2.4,<3.0)"] +tests = ["pytest", "pytz", "simplejson"] + [[package]] name = "matplotlib-inline" -version = "0.1.3" +version = "0.1.6" description = "Inline Matplotlib backend for Jupyter" category = "dev" optional = false @@ -592,11 +1062,19 @@ python-versions = ">=3.5" [package.dependencies] traitlets = "*" +[[package]] +name = "msgpack" +version = "1.0.4" +description = "MessagePack serializer" +category = "main" +optional = false +python-versions = "*" + [[package]] name = "packaging" version = "21.3" description = "Core utilities for Python packages" -category = "dev" +category = "main" optional = false python-versions = ">=3.6" @@ -617,14 +1095,14 @@ testing = ["docopt", "pytest (<6.0.0)"] [[package]] name = "pep517" -version = "0.12.0" +version = "0.13.0" description = "Wrappers to build Python packages using PEP 517 hooks" category = "dev" optional = false -python-versions = "*" +python-versions = ">=3.6" [package.dependencies] -tomli = {version = ">=1.1.0", markers = "python_version >= \"3.6\""} +tomli = {version = ">=1.1.0", markers = "python_version < \"3.11\""} [[package]] name = "pexpect" @@ -647,21 +1125,20 @@ python-versions = "*" [[package]] name = "pluggy" -version = "1.0.0" +version = "0.13.1" description = "plugin and hook calling mechanisms for python" -category = "dev" +category = "main" optional = false -python-versions = ">=3.6" +python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" [package.extras] dev = ["pre-commit", "tox"] -testing = ["pytest", "pytest-benchmark"] [[package]] name = "prompt-toolkit" -version = "3.0.29" +version = "3.0.30" description = "Library for building powerful interactive command lines in Python" -category = "dev" +category = "main" optional = false python-versions = ">=3.6.2" @@ -697,11 +1174,11 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" [[package]] name = "pycodestyle" -version = "2.8.0" +version = "2.9.1" description = "Python style guide checker" category = "dev" optional = false -python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" +python-versions = ">=3.6" [[package]] name = "pydocstyle" @@ -719,31 +1196,42 @@ toml = ["toml"] [[package]] name = "pyflakes" -version = "2.4.0" +version = "2.5.0" description = "passive checker of Python programs" category = "dev" optional = false -python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" +python-versions = ">=3.6" [[package]] name = "pygments" -version = "2.12.0" +version = "2.13.0" description = "Pygments is a syntax highlighting package written in Python." category = "dev" optional = false python-versions = ">=3.6" +[package.extras] +plugins = ["importlib-metadata"] + [[package]] name = "pyparsing" version = "3.0.9" description = "pyparsing module - Classes and methods to define and execute parsing grammars" -category = "dev" +category = "main" optional = false python-versions = ">=3.6.8" [package.extras] diagrams = ["railroad-diagrams", "jinja2"] +[[package]] +name = "pyrsistent" +version = "0.18.1" +description = "Persistent/Functional/Immutable data structures" +category = "main" +optional = false +python-versions = ">=3.7" + [[package]] name = "pytest" version = "6.2.5" @@ -798,11 +1286,11 @@ docs = ["sphinx", "sphinx-rtd-theme"] [[package]] name = "pytest-invenio" -version = "1.4.11" -description = "Pytest fixtures for Invenio." +version = "1.4.13" +description = "\"Pytest fixtures for Invenio.\"" category = "dev" optional = false -python-versions = "*" +python-versions = ">=3.7" [package.dependencies] check-manifest = ">=0.42" @@ -819,9 +1307,7 @@ pytest-pydocstyle = ">=2.2.0" selenium = ">=3.7.0,<4" [package.extras] -all = ["Sphinx (>=4.2.0)", "elasticsearch (>=7.0.0,<7.14)", "elasticsearch-dsl (>=7.0.0,<8.0.0)", "invenio-celery (>=1.2.4)", "invenio-db (>=1.0.12,<1.1.0)", "invenio-files-rest (>=1.3.2)", "invenio-mail (>=1.0.2,<1.1.0)", "invenio-search (>=1.4.2,<1.5.0)"] -docs = ["Sphinx (>=4.2.0)"] -tests = ["elasticsearch (>=7.0.0,<7.14)", "elasticsearch-dsl (>=7.0.0,<8.0.0)", "invenio-celery (>=1.2.4)", "invenio-db (>=1.0.12,<1.1.0)", "invenio-files-rest (>=1.3.2)", "invenio-mail (>=1.0.2,<1.1.0)", "invenio-search (>=1.4.2,<1.5.0)"] +tests = ["pytest-black (>=0.3.0,<0.3.10)", "elasticsearch (>=7.0.0,<7.14)", "elasticsearch-dsl (>=7.0.0,<8.0.0)", "invenio-celery (>=1.2.4)", "invenio-db (>=1.0.12,<1.1.0)", "invenio-files-rest (>=1.3.2)", "invenio-mail (>=1.0.2,<1.1.0)", "invenio-search (>=1.4.2,<1.5.0)", "sphinx (>=4.5)"] [[package]] name = "pytest-isort" @@ -878,9 +1364,9 @@ six = ">=1.5" [[package]] name = "pytz" -version = "2022.1" +version = "2022.2.1" description = "World timezone definitions, modern and historical" -category = "dev" +category = "main" optional = false python-versions = "*" @@ -892,23 +1378,40 @@ category = "main" optional = false python-versions = ">=3.6" +[[package]] +name = "redis" +version = "4.3.4" +description = "Python client for Redis database and key-value store" +category = "main" +optional = false +python-versions = ">=3.6" + +[package.dependencies] +async-timeout = ">=4.0.2" +deprecated = ">=1.2.3" +packaging = ">=20.4" + +[package.extras] +hiredis = ["hiredis (>=1.0.0)"] +ocsp = ["cryptography (>=36.0.1)", "pyopenssl (==20.0.1)", "requests (>=2.26.0)"] + [[package]] name = "requests" -version = "2.27.1" +version = "2.28.1" description = "Python HTTP for Humans." category = "dev" optional = false -python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*" +python-versions = ">=3.7, <4" [package.dependencies] certifi = ">=2017.4.17" -charset-normalizer = {version = ">=2.0.0,<2.1.0", markers = "python_version >= \"3\""} -idna = {version = ">=2.5,<4", markers = "python_version >= \"3\""} +charset-normalizer = ">=2,<3" +idna = ">=2.5,<4" urllib3 = ">=1.21.1,<1.27" [package.extras] -socks = ["PySocks (>=1.5.6,!=1.5.7)", "win-inet-pton"] -use_chardet_on_py3 = ["chardet (>=3.0.2,<5)"] +socks = ["PySocks (>=1.5.6,!=1.5.7)"] +use_chardet_on_py3 = ["chardet (>=3.0.2,<6)"] [[package]] name = "safety" @@ -935,6 +1438,14 @@ python-versions = "*" [package.dependencies] urllib3 = "*" +[[package]] +name = "simplejson" +version = "3.17.6" +description = "Simple, fast, extensible JSON encoder/decoder for Python" +category = "main" +optional = false +python-versions = ">=2.5, !=3.0.*, !=3.1.*, !=3.2.*" + [[package]] name = "six" version = "1.16.0" @@ -951,6 +1462,14 @@ category = "dev" optional = false python-versions = "*" +[[package]] +name = "speaklater" +version = "1.3" +description = "implements a lazy string for python useful for use with gettext" +category = "main" +optional = false +python-versions = "*" + [[package]] name = "sphinx" version = "4.5.0" @@ -1056,7 +1575,7 @@ test = ["pytest"] [[package]] name = "sqlalchemy" -version = "1.4.36" +version = "1.4.40" description = "Database Abstraction Library" category = "main" optional = false @@ -1070,7 +1589,7 @@ aiomysql = ["greenlet (!=0.4.17)", "aiomysql"] aiosqlite = ["typing_extensions (!=3.10.0.1)", "greenlet (!=0.4.17)", "aiosqlite"] asyncio = ["greenlet (!=0.4.17)"] asyncmy = ["greenlet (!=0.4.17)", "asyncmy (>=0.2.3,!=0.2.4)"] -mariadb_connector = ["mariadb (>=1.0.1)"] +mariadb_connector = ["mariadb (>=1.0.1,!=1.1.2)"] mssql = ["pyodbc"] mssql_pymssql = ["pymssql"] mssql_pyodbc = ["pyodbc"] @@ -1080,7 +1599,7 @@ mysql_connector = ["mysql-connector-python"] oracle = ["cx_oracle (>=7,<8)", "cx_oracle (>=7)"] postgresql = ["psycopg2 (>=2.7)"] postgresql_asyncpg = ["greenlet (!=0.4.17)", "asyncpg"] -postgresql_pg8000 = ["pg8000 (>=1.16.6)"] +postgresql_pg8000 = ["pg8000 (>=1.16.6,!=1.29.0)"] postgresql_psycopg2binary = ["psycopg2-binary"] postgresql_psycopg2cffi = ["psycopg2cffi"] pymysql = ["pymysql (<1)", "pymysql"] @@ -1109,15 +1628,14 @@ test = ["pytest (>=2.3.5)", "flexmock (>=0.9.7)", "psycopg2 (>=2.4.6)", "PyMySQL [[package]] name = "sqlalchemy-utils" -version = "0.38.2" +version = "0.38.3" description = "Various utility functions for SQLAlchemy." category = "main" optional = false -python-versions = "~=3.4" +python-versions = "~=3.6" [package.dependencies] -six = "*" -SQLAlchemy = ">=1.0" +SQLAlchemy = ">=1.3" [package.extras] arrow = ["arrow (>=0.3.4)"] @@ -1128,14 +1646,14 @@ intervals = ["intervals (>=0.7.1)"] password = ["passlib (>=1.6,<2.0)"] pendulum = ["pendulum (>=2.0.5)"] phone = ["phonenumbers (>=5.9.2)"] -test = ["pytest (>=2.7.1)", "Pygments (>=1.2)", "Jinja2 (>=2.3)", "docutils (>=0.10)", "flexmock 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[tool.poetry.dev-dependencies] safety = "^1.10.3" @@ -30,3 +31,10 @@ build-backend = "poetry.core.masonry.api" [tool.poetry.plugins."flask.commands"] rero = "rero_invenio_base.cli:rero" + +[tool.poetry.plugins."invenio_base.apps"] +rero-invenio-base-export = "rero_invenio_base.modules.export.ext:ReroInvenioBaseExportApp" + +[tool.poetry.plugins."invenio_base.api_blueprints"] +rero_ils_exports = "rero_invenio_base.modules.export.views:create_blueprint_from_app" + diff --git a/rero_invenio_base/modules/__init__.py b/rero_invenio_base/modules/__init__.py new file mode 100644 index 0000000..22a05be --- /dev/null +++ b/rero_invenio_base/modules/__init__.py @@ -0,0 +1,19 @@ +# -*- coding: utf-8 -*- +# +# RERO Invenio Base +# Copyright (C) 2022 RERO. +# Copyright (C) 2022 UCLouvain. +# +# This program is free software: you can redistribute it and/or modify +# it under the terms of the GNU Affero General Public License as published by +# the Free Software Foundation, version 3 of the License. +# +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU Affero General Public License for more details. +# +# You should have received a copy of the GNU Affero General Public License +# along with this program. If not, see . + +"""RERO Invenio Base Modules extension.""" diff --git a/rero_invenio_base/modules/export/__init__.py b/rero_invenio_base/modules/export/__init__.py new file mode 100644 index 0000000..824c0f9 --- /dev/null +++ b/rero_invenio_base/modules/export/__init__.py @@ -0,0 +1,23 @@ +# -*- coding: utf-8 -*- +# +# RERO Invenio Base +# Copyright (C) 2022 RERO. +# Copyright (C) 2022 UCLouvain. +# +# This program is free software: you can redistribute it and/or modify +# it under the terms of the GNU Affero General Public License as published by +# the Free Software Foundation, version 3 of the License. +# +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU Affero General Public License for more details. +# +# You should have received a copy of the GNU Affero General Public License +# along with this program. If not, see . + +"""RERO Invenio Base export module extension.""" + +from rero_invenio_base.modules.export.proxies import current_export + +__all__ = ('current_export',) diff --git a/rero_invenio_base/modules/export/config.py b/rero_invenio_base/modules/export/config.py new file mode 100644 index 0000000..3a99de3 --- /dev/null +++ b/rero_invenio_base/modules/export/config.py @@ -0,0 +1,61 @@ +# -*- coding: utf-8 -*- +# +# RERO Invenio Base +# Copyright (C) 2022 RERO. +# Copyright (C) 2022 UCLouvain. +# +# This program is free software: you can redistribute it and/or modify +# it under the terms of the GNU Affero General Public License as published by +# the Free Software Foundation, version 3 of the License. +# +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU Affero General Public License for more details. +# +# You should have received a copy of the GNU Affero General Public License +# along with this program. If not, see . + +"""RERO Invenio Base export module configuration file.""" + +""" + This module must be used to create dynamic export route for resource + configured by the `invenio-records-rest`. Exports endpoints will provide + streamed content. The content is based on an ElasticSearch search result ; + this result is processed using ElasticSearch `scan()` method tu fully + implement streamed result. + + Each configured endpoint add a flask blueprint endpoint accessible using the + `/export/{resource_list_route/` url. + + +.. code-block:: python + +RERO_INVENIO_BASE_EXPORT_REST_ENDPOINTS = dict( + loan=dict( + resource={invenio-record-rest_resource_configuration_endpoint}, + default_media_type='text/csv', + search_serializers={ + 'text/csv': 'rero_ils.modules.loans.serializers:csv_stream_search', + }, + search_serializers_aliases={ + 'csv': 'text/csv' + } + ) +) + +:param resource: Pointer to the resource rest configuration endpoint from + `invenio-record-rest`. Check `https://github.com/inveniosoftware/invenio- + records-rest/blob/master/invenio_records_rest/config.py` to get correct + resource configuration. + +:param search_serializers: It contains the list of records serializers for all + supported format. This configuration differ from the previous because in + this case it handle a list of records resulted by a search query instead of + a single record. + +:param search_serializers_aliases: A mapping of values of the defined query arg + (see `config.REST_MIMETYPE_QUERY_ARG_NAME`) to valid mimetypes for records + search serializers: dict(alias -> mimetype). + +""" diff --git a/rero_invenio_base/modules/export/ext.py b/rero_invenio_base/modules/export/ext.py new file mode 100644 index 0000000..a041fa9 --- /dev/null +++ b/rero_invenio_base/modules/export/ext.py @@ -0,0 +1,40 @@ +# -*- coding: utf-8 -*- +# +# RERO Invenio Base +# Copyright (C) 2022 RERO. +# Copyright (C) 2022 UCLouvain. +# +# This program is free software: you can redistribute it and/or modify +# it under the terms of the GNU Affero General Public License as published by +# the Free Software Foundation, version 3 of the License. +# +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU Affero General Public License for more details. +# +# You should have received a copy of the GNU Affero General Public License +# along with this program. If not, see . + +"""RERO Invenio base module declaration for streamed exports.""" + + +class ReroInvenioBaseExportApp: + """RERO Invenio base export app.""" + + def __init__(self, app=None): + """Extension initialization.""" + if app: + self.app = app + self.init_app(app) + + def init_app(self, app): + """Flask application initialization.""" + self.init_config(app) + app.extensions['rero_invenio_base_exports'] = self + + def init_config(self, app): + """Initialize configuration.""" + for k in dir(app.config): + if k.startswith('RERO_INVENIO_BASE_EXPORT'): + app.config.setdefault(k, getattr(app.config, k)) diff --git a/rero_invenio_base/modules/export/proxies.py b/rero_invenio_base/modules/export/proxies.py new file mode 100644 index 0000000..5832d6d --- /dev/null +++ b/rero_invenio_base/modules/export/proxies.py @@ -0,0 +1,27 @@ +# -*- coding: utf-8 -*- +# +# RERO Invenio Base +# Copyright (C) 2022 RERO. +# Copyright (C) 2022 UCLouvain. +# +# This program is free software: you can redistribute it and/or modify +# it under the terms of the GNU Affero General Public License as published by +# the Free Software Foundation, version 3 of the License. +# +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU Affero General Public License for more details. +# +# You should have received a copy of the GNU Affero General Public License +# along with this program. If not, see . + +"""Helper proxy.""" + +from flask import current_app +from werkzeug.local import LocalProxy + +current_export = LocalProxy( + lambda: current_app.extensions["rero_invenio_base_exports"] +) +"""Helper proxy to get the current 'RERO Invenio base' exports extension.""" diff --git a/rero_invenio_base/modules/export/views.py b/rero_invenio_base/modules/export/views.py new file mode 100644 index 0000000..c2ed2c3 --- /dev/null +++ b/rero_invenio_base/modules/export/views.py @@ -0,0 +1,133 @@ +# -*- coding: utf-8 -*- +# +# RERO Invenio Base +# Copyright (C) 2022 RERO. +# Copyright (C) 2022 UCLouvain. +# +# This program is free software: you can redistribute it and/or modify +# it under the terms of the GNU Affero General Public License as published by +# the Free Software Foundation, version 3 of the License. +# +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU Affero General Public License for more details. +# +# You should have received a copy of the GNU Affero General Public License +# along with this program. If not, see . + +"""RERO Invenio Base exports views.""" +from copy import deepcopy +from functools import partial + +from flask import Blueprint +from invenio_pidstore import current_pidstore +from invenio_records_rest.query import es_search_factory +from invenio_records_rest.utils import obj_or_import_string +from invenio_records_rest.views import need_record_permission +from invenio_rest import ContentNegotiatedMethodView +from invenio_search import RecordsSearch + + +def create_blueprint_from_app(app): + """Create RERO exports blueprint from a Flask application. + + .. note:: + This function assumes that the application has loaded all extensions + that want to register REST endpoints via the ``RECORDS_REST_ENDPOINTS`` + configuration variable. + + :params app: A Flask application. + :returns: Configured blueprint. + """ + api_blueprint = Blueprint('api_exports', __name__, url_prefix='') + endpoints = app.config.get('RERO_INVENIO_BASE_EXPORT_REST_ENDPOINTS', {}) + for key, config in endpoints.items(): + copy_config = deepcopy(config) + resource_config = copy_config.pop('resource', {}) + route_config = resource_config | copy_config # merging dictionary + rule = create_export_url_route(key, **route_config) + api_blueprint.add_url_rule(**rule) + return api_blueprint + + +def create_export_url_route(endpoint, default_media_type=None, + list_permission_factory_imp=None, + list_route=None, pid_fetcher=None, + search_class=None, + search_factory_imp=None, + search_serializers=None, + search_serializers_aliases=None, **kwargs): + """Create Werkzeug URL rule for resource streamed export. + + :param kwargs: all argument necessary to build the flask endpoint. + :returns: a configuration dict who can be passed as keywords argument to + ``Blueprint.add_url_rule``. + """ + assert list_route + assert search_serializers + + # BUILD LIST_ROUTE AND VIEW_NAME + # Override the resource `list_route` adding an "export" prefix. + # NOTE: Using REST guidelines it should be best to build the path using + # "export" as url suffix ; but it can't be done here because this url + # is already used for record serialization. + view_name = f'{endpoint}_export' + list_route = f'/export{list_route}' + + # ACCESS PERMISSIONS + # Permission to access to any export route are the same as list resource + # records permission. + permission_factory = obj_or_import_string(list_permission_factory_imp) + + search_class = obj_or_import_string(search_class, default=RecordsSearch) + + export_view = ExportResource.as_view( + view_name, + default_media_type=default_media_type, + permission_factory=permission_factory, + pid_fetcher=pid_fetcher, + search_class=search_class, + search_serializers=search_serializers, + serializers_query_aliases=search_serializers_aliases, + search_factory=obj_or_import_string( + search_factory_imp, default=es_search_factory) + ) + return {'rule': list_route, 'view_func': export_view} + + +class ExportResource(ContentNegotiatedMethodView): + """Resource for records streamed exports.""" + + def __init__(self, default_media_type=None, permission_factory=None, + pid_fetcher=None, search_class=None, search_factory=None, + search_serializers=None, serializers_query_aliases=None, + **kwargs): + """Init magic method.""" + serializers = { + mime: obj_or_import_string(search_obj) + for mime, search_obj in search_serializers.items() or {}.items() + } + super().__init__( + method_serializers={'GET': serializers}, + serializers_query_aliases=serializers_query_aliases, + default_method_media_type={'GET': default_media_type}, + default_media_type=default_media_type, + **kwargs + ) + self.permission_factory = permission_factory + self.pid_fetcher = current_pidstore.fetchers[pid_fetcher] + self.search_class = search_class + self.search_factory = partial(search_factory, self) + + @need_record_permission('permission_factory') + def get(self, **kwargs): + """Implements GET /export/{resource_list_name}.""" + search_obj = self.search_class() + search = search_obj.with_preference_param().params(version=True) + search, _ = self.search_factory(search) + + return self.make_response( + pid_fetcher=None, + search_result=search.scan() + ) diff --git a/run-tests.sh b/run-tests.sh index 7d97b87..2702969 100755 --- a/run-tests.sh +++ b/run-tests.sh @@ -33,7 +33,19 @@ function cleanup() { echo "Done" } trap cleanup EXIT -safety check -i 42194 + +# Check vulnerabilities: +# +# Exception are +# +============================+===========+==========================+==========+ +# | package | installed | affected | ID | +# +============================+===========+==========================+==========+ +# | kombu | 5.1.0 | <5.2.1 | 42497 | +# | celery | 5.0.2 | <5.2.0 | 42498 | +# | celery | 5.0.2 | <5.2.2 | 43738 | +# +==============================================================================+ +safety check -i 42194 -i 42497 -i 42498 -i 43738 + flask rero utils check_license check_license_config.yml pydocstyle rero_ils tests docs isort --check-only --diff rero_invenio_base tests diff --git a/tests/conftest.py b/tests/conftest.py index 8263eeb..553289c 100644 --- a/tests/conftest.py +++ b/tests/conftest.py @@ -23,14 +23,17 @@ import contextlib +import copy import pytest from click.testing import CliRunner from flask import Flask from invenio_db import InvenioDB +from invenio_records_rest import config as _config from invenio_search import InvenioSearch, current_search_client from rero_invenio_base import REROInvenioBase +from rero_invenio_base.modules.export.ext import ReroInvenioBaseExportApp @pytest.fixture(scope='function') @@ -79,7 +82,12 @@ def create_app(instance_path): def factory(**config): app = Flask('testapp', instance_path=instance_path) app.config.update(**config) + app.config.update( + RECORDS_REST_ENDPOINTS=copy.deepcopy( + _config.RECORDS_REST_ENDPOINTS) + ) REROInvenioBase(app) + ReroInvenioBaseExportApp(app) InvenioDB(app) InvenioSearch(app) return app diff --git a/tests/test_ext.py b/tests/test_ext.py new file mode 100644 index 0000000..1f64413 --- /dev/null +++ b/tests/test_ext.py @@ -0,0 +1,61 @@ +# -*- coding: utf-8 -*- +# +# RERO Invenio Base +# Copyright (C) 2022 RERO. +# Copyright (C) 2022 UCLouvain. +# +# This program is free software: you can redistribute it and/or modify +# it under the terms of the GNU Affero General Public License as published by +# the Free Software Foundation, version 3 of the License. +# +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU Affero General Public License for more details. +# +# You should have received a copy of the GNU Affero General Public License +# along with this program. If not, see . + + +"""Extension initialization tests.""" + +from __future__ import absolute_import, print_function + +from flask import Flask + +from rero_invenio_base.modules.export.ext import ReroInvenioBaseExportApp +from rero_invenio_base.modules.export.views import create_blueprint_from_app + + +def test_init(): + """Test extension initialization.""" + app = Flask("testapp") + ext = ReroInvenioBaseExportApp() + assert "rero_invenio_base_exports" not in app.extensions + ext.init_app(app) + assert "rero_invenio_base_exports" in app.extensions + + +def test_blueprints(app): + """Test blueprints.""" + + rest_endpoints = app.config.get('RECORDS_REST_ENDPOINTS') + app.config['RERO_INVENIO_BASE_EXPORT_REST_ENDPOINTS'] = dict( + record=dict( + resource=rest_endpoints['recid'], + default_media_type='text/csv', + search_serializers={ + 'text/csv': + 'invenio_records_rest.serializers:json_v1_response', + }, + search_serializers_aliases={ + 'csv': 'text/csv' + } + ) + ) + blueprint = create_blueprint_from_app(app) + app.register_blueprint(blueprint) + + routes = [str(p) for p in app.url_map.iter_rules()] + route_to_test = f"/export{rest_endpoints['recid']['list_route']}" + assert route_to_test in routes