Add needed pip packages to src/environment.yml, minimize conda environments
#12073
Workflow file for this run
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| name: Build & Test using Conda | |
| on: | |
| push: | |
| tags: | |
| - '*' | |
| branches: | |
| - 'public/build/**-runci' | |
| pull_request: | |
| workflow_dispatch: | |
| # Allow to run manually | |
| concurrency: | |
| # Cancel previous runs of this workflow for the same branch | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| test: | |
| name: Conda | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| # On pushes to tags or branches, test the whole matrix. | |
| os: >- | |
| ${{ github.event_name == 'pull_request' | |
| && fromJson('["ubuntu-latest"]') | |
| || fromJson('["ubuntu-latest", "macos-latest", "macos-13"]') }} | |
| python: >- | |
| ${{ github.event_name == 'pull_request' | |
| && fromJson('["3.9"]') | |
| || fromJson('["3.9", "3.10", "3.11"]') }} | |
| # Optional environment is disabled for now as its not yet working | |
| # environment: [environment, environment-optional] | |
| conda-env: [environment] | |
| # On pull requests, only test two jobs: | |
| # Ubuntu with Python 3.9, macOS (arm64) with Python 3.11. | |
| # Build & Test currently uses Python 3.10 (on ubuntu-jammy). | |
| # Together, they cover the supported minor Python versions. | |
| include: >- | |
| ${{ github.event_name == 'pull_request' | |
| && fromJson('[{"os": "macos-latest", "python": "3.11", "conda-env": "environment"}]') | |
| || fromJson('[]') }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Merge CI fixes from sagemath/sage | |
| run: | | |
| .ci/merge-fixes.sh | |
| env: | |
| GH_TOKEN: ${{ github.token }} | |
| SAGE_CI_FIXES_FROM_REPOSITORIES: ${{ vars.SAGE_CI_FIXES_FROM_REPOSITORIES }} | |
| - name: Cache conda packages | |
| uses: actions/cache@v4 | |
| with: | |
| path: ~/conda_pkgs_dir | |
| key: | |
| ${{ runner.os }}-conda-${{ hashFiles('src/environment-3.11.yml') }} | |
| - name: Setup Conda environment | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| python-version: ${{ matrix.python }} | |
| miniforge-version: latest | |
| use-mamba: true | |
| channels: conda-forge | |
| channel-priority: true | |
| activate-environment: sage | |
| environment-file: src/${{ matrix.conda-env }}-${{ matrix.python }}-${{ startsWith(matrix.os, 'macos') && (startsWith(runner.arch, 'ARM') && 'macos' || 'macos-x86_64') || 'linux' }}.yml | |
| - name: Print Conda environment | |
| shell: bash -l {0} | |
| run: | | |
| conda info | |
| conda list | |
| - name: Bootstrap | |
| shell: bash -l {0} | |
| continue-on-error: true | |
| run: | | |
| ./bootstrap | |
| - name: Build | |
| shell: bash -l {0} | |
| run: | | |
| # Use --no-deps and pip check below to verify that all necessary dependencies are installed via conda. | |
| pip install --no-build-isolation --no-deps --config-settings editable_mode=compat -v -v -e ./src | |
| env: | |
| SAGE_NUM_THREADS: 5 | |
| - name: Verify dependencies | |
| if: success() || failure() | |
| shell: bash -l {0} | |
| run: pip check | |
| - name: Test | |
| if: success() || failure() | |
| shell: bash -l {0} | |
| run: ./sage -t --all --baseline-stats-path=.github/workflows/ci-conda-known-test-failures.json -p0 | |
| - name: Print logs | |
| if: always() | |
| run: | | |
| for file in $(find . -type f -name "*.log"); do | |
| echo "::group::$file" | |
| cat "$file" | |
| echo "::endgroup::" | |
| done |