From 7d9703fa1070258d392d45f484374e570a16a28c Mon Sep 17 00:00:00 2001 From: andrewjpage Date: Tue, 24 Jul 2012 11:27:51 +0100 Subject: [PATCH] default mlst dir to base pathpipe --- download_mlst_databases | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/download_mlst_databases b/download_mlst_databases index e7fb19e..2f91840 100755 --- a/download_mlst_databases +++ b/download_mlst_databases @@ -52,7 +52,7 @@ USAGE ; $config_file ||= 'http://pubmlst.org/data/dbases.xml'; -$base_directory ||= '/lustre/scratch108/pathogen/pathpipe/prokaryotes/mlst'; +$base_directory ||= '/lustre/scratch108/pathogen/pathpipe/mlst'; my $database_settings = MLST::DatabaseSettings->new(filename => $config_file)->settings; my $databases = MLST::Download::Databases->new(