diff --git a/.github/workflows/bench-history.yaml b/.github/workflows/bench-history.yaml
index 39c16f408f14..22893b578707 100644
--- a/.github/workflows/bench-history.yaml
+++ b/.github/workflows/bench-history.yaml
@@ -34,7 +34,7 @@ jobs:
         run: |
           corepack enable
           pnpm i
-          ./x build cli:release
+          pnpm -w build:cli:release
           export ROOT_DIR=$(pwd) && cd benchcases/react-refresh && pnpm dev
 
       - name: Store benchmark result
diff --git a/.github/workflows/release-canary.yml b/.github/workflows/release-canary.yml
index a1535e525287..6b043c9d4f65 100644
--- a/.github/workflows/release-canary.yml
+++ b/.github/workflows/release-canary.yml
@@ -42,7 +42,7 @@ jobs:
       - name: Build
         run: |
           set -e
-          USE_ZIG=1 ./x build cli:release:all
+          USE_ZIG=1 pnpm -w build:cli:release:all
 
       - name: Release
         uses: modern-js-dev/actions@v2
diff --git a/CONTRIBUTING.md b/CONTRIBUTING.md
index 26f1813e8bb0..4d440cac8a77 100644
--- a/CONTRIBUTING.md
+++ b/CONTRIBUTING.md
@@ -157,5 +157,5 @@ To make releasing easier, Rspack use github action to automate creating versioni
 
 1. Install `go install github.com/go-delve/delve/cmd/dlv@latest`
 2. Install vscode extension [rust-analyzer](https://marketplace.visualstudio.com/items?itemName=rust-lang.rust-analyzer) and [CodeLLDB](https://marketplace.visualstudio.com/items?itemName=vadimcn.vscode-lldb)
-3. build `@rspack/cli` and napi binding by run `./x build cli:debug`
+3. build `@rspack/cli` and napi binding by run `pnpm -w build:cli:debug`
 4. In Vscode's `Run and Debug` tab, select `debug-rspack` to start debugging the initial launch of `@rspack/cli`, This task is configured in `.vscode/launch.json`, which launch node debugger and rust debugger together. so you can debug both rust and nodejs code.
diff --git a/Makefile b/Makefile
deleted file mode 100644
index 43f2c8e212c1..000000000000
--- a/Makefile
+++ /dev/null
@@ -1,61 +0,0 @@
-# github/three:
-# 	mkdir -p github
-# 	git clone --depth 1 --branch r108 https://github.com/mrdoob/three.js.git github/three
-copy/three:
-
-	mkdir -p benchcases/three/src
-	echo > benchcases/three/src/entry.js
-	for i in 1 2 3 4 5 6 7 8 9 10; do test -d "benchcases/three/src/copy$$i" || cp -r examples/.three/src "benchcases/three/src/copy$$i"; done
-	for i in 1 2 3 4 5 6 7 8 9 10; do echo "import * as copy$$i from './copy$$i/Three.js'; export {copy$$i}" >> benchcases/three/src/entry.js; done
-	echo "module.exports = {mode: 'development',entry: {index: {import: ['./src/entry.js']}}};" > benchcases/three/test.config.js
-	echo "module.exports = {mode: 'development',entry: {index: ['./benchcases/three/src/entry.js']},devtool: 'eval',cache: {type: 'filesystem'}}" > benchcases/three/webpack.config.js
-
-flamegraph:
-	samply record ./target/release/bench
-
-bench_three: | copy/three
-	@cargo build -p bench --release
-	@echo "rspack"
-	@hyperfine --warmup 3  \
-		-n rspack './target/release/bench' \
-		-n esbuild  './node_modules/esbuild/bin/esbuild --bundle --global-name=THREE  benchcases/three/src/entry.js --outfile=benchcases/three/esbuild/entry.esbuild.js --timing' \
-		-n webpack './node_modules/webpack-cli/bin/cli.js  -c ./benchcases/three/webpack.config.js'
-
-
-esbuild_trace:
-	./node_modules/esbuild/bin/esbuild --bundle benchcases/three/src/entry.js --outfile=/dev/null --trace=esbuild.trace
-	go tool trace esbuild.trace
-
-esbuild_cpuprofile:
-	./node_modules/esbuild/bin/esbuild --bundle benchcases/three/src/entry.js --outfile=/dev/null --cpuprofile=esbuild.cpuprofile
-	go tool pprof -http=:1234 esbuild.cpuprofile
-
-rspack_trace:
-	TRACE=TRACE cargo run -F tracing -F hmr --release --bin bench
-
-
-sync_bnpm:
-	@bnpm sync @rspack/core
-	@bnpm sync @rspack/dev-server
-	@bnpm sync @rspack/dev-client
-	@bnpm sync @rspack/dev-middleware
-	@bnpm sync @rspack/plugin-less
-	@bnpm sync @rspack/plugin-postcss
-	@bnpm sync @rspack/cli
-	@bnpm sync @rspack/binding
-	@bnpm sync @rspack/binding-darwin-arm64
-	@bnpm sync @rspack/binding-darwin-x64
-	@bnpm sync @rspack/binding-linux-x64-gnu
-	@bnpm sync create-rspack
-snapshot_ci:
-	@./x build cli:release:all
-	@pnpm version:snapshot
-	@pnpm release:snapshot
-release:
-	@./x build cli:release:all
-	@pnpm bump
-	@pnpm release
-	@make sync_bnpm
-release-snapshot:
-	@make snapshot_ci
-	@make sync_bnpm
\ No newline at end of file
diff --git a/package.json b/package.json
index d800f76fa5c1..6ef236624540 100644
--- a/package.json
+++ b/package.json
@@ -7,20 +7,17 @@
   "scripts": {
     "dev": "pnpm --filter @rspack/cli run dev",
     "clean": "pnpm --filter @rspack/cli run clean",
-    "init": "./x i",
-    "setup": "./x i && ./x build binding",
-    "build:js": "./x build js",
-    "build:cli:debug": "./x build cli:debug",
-    "build:cli:release": "./x build cli:release",
-    "build:cli:release:all": "./x build cli:release:all",
-    "build:webpack": "./x build webpack",
-    "test:js": "./x test js",
-    "format:rs": "./x format rs",
-    "format:js": "./x format js",
-    "format-ci:toml": "./x format toml",
+    "build:js": "pnpm --filter \"@rspack/*\" build",
+    "build:cli:debug": "pnpm --filter @rspack/binding build:debug && pnpm --filter \"@rspack/*\" build",
+    "build:cli:release": "pnpm --filter @rspack/binding build:release && pnpm --filter \"@rspack/*\" build",
+    "build:cli:release:all": "pnpm --filter @rspack/binding build:release:all && pnpm --filter \"@rspack/*\" build",
+    "test:js": "pnpm -r run test",
+    "format:rs": "pnpm --filter @rspack/core... build",
+    "format:js": "npx prettier \"packages/**/*.{ts,js}\" \"crates/rspack_plugin_runtime/**/*.{ts,js}\" --check --write",
+    "format-ci:toml": "npx @taplo/cli format --check '.cargo/*.toml' './crates/**/Cargo.toml' './Cargo.toml'",
     "format:toml": "npx @taplo/cli format '.cargo/*.toml' './crates/**/Cargo.toml' './Cargo.toml'",
-    "lint:js": "./x lint js",
-    "lint:rs": "./x lint rs",
+    "lint:js": "npx prettier \"packages/**/*.{ts,js}\" --check",
+    "lint:rs": "node ./scripts/check_rust_dependency.js",
     "build:binding:debug": "pnpm --filter @rspack/binding run build:debug",
     "build:binding:release": "pnpm --filter @rspack/binding run build:release",
     "version:snapshot": "changeset version --snapshot",
diff --git a/scripts/check_rust_dependency.js b/scripts/check_rust_dependency.js
index 8f09392d6bfe..259eeea0e36b 100644
--- a/scripts/check_rust_dependency.js
+++ b/scripts/check_rust_dependency.js
@@ -1,4 +1,15 @@
 // @ts-nocheck
+
+// The code checks for multiple version dependencies in Rust crates.
+// It reads the Cargo.toml files of all crates in a specified directory and extracts the dependencies.
+// It then uses the cargo tree command to get a list of all dependencies and their versions and
+// checks if any of the dependencies have multiple versions.
+// If a crate has multiple version dependencies, an error message is pushed to an array. Finally,
+// if there are any error messages, they are logged to the console along with a command to run for more information.
+
+// This is a best effort checking. It's possible that some dependencies may be missed, especially if
+// they are not listed in the Cargo.toml file or if they are not direct dependencies of the crate.
+
 const path = require("path");
 const fs = require("fs");
 const child_process = require("child_process");
diff --git a/scripts/cmd.js b/scripts/cmd.js
deleted file mode 100644
index 5ee0ebbc3ace..000000000000
--- a/scripts/cmd.js
+++ /dev/null
@@ -1,262 +0,0 @@
-// @ts-nocheck
-const cp = require("child_process");
-const log = require("./log");
-const { Command } = require("commander");
-
-const COMMANDER_VERSION = "2.20.3";
-
-function checkCommandVersion() {
-	const pkgInfo = require(require.resolve("commander/package.json"));
-	if (pkgInfo.version !== COMMANDER_VERSION) {
-		log.error(
-			`expected the version of Commander is 2.20.3, yours is ${pkgInfo.version}`
-		);
-		process.exit(1);
-	}
-}
-
-function createCLI() {
-	checkCommandVersion();
-
-	const cli = new Command();
-
-	cli.description("cli to control project").version("0.1.0");
-
-	cli
-		.command("install")
-		.alias("i")
-		.description("install node dependencies")
-		.action(() => {
-			const COMMAND = "pnpm i";
-			log.info(`start install deps by '${COMMAND}'`);
-			cp.execSync(COMMAND, {
-				stdio: "inherit"
-			});
-			log.info("finish install deps");
-		});
-	cli
-		.command("test")
-		.option("rust", "run all rust test")
-		.option("example", "test arco pro in rust side")
-		.option("js", "test all js packages")
-		.action(args => {
-			let command;
-			switch (args) {
-				case "rust":
-					command = "cargo test --all -- --nocapture";
-					break;
-				case "js":
-					command = "pnpm -r run test";
-					break;
-				case "example":
-					command = "cargo run --example arco_pro";
-					break;
-				default:
-					log.error("invalid args, see `./x test -h` to get more information");
-					process.exit(1);
-			}
-			if (!command) {
-				return;
-			}
-			log.info(`start test by '${command}'`);
-			cp.execSync(command, {
-				stdio: "inherit"
-			});
-			log.info("test finished");
-		});
-	cli
-		.command("dev")
-		.description("run dev for ")
-		.option("js", "dev for all js package")
-		.action(args => {
-			let command;
-			switch (args) {
-				case "js":
-					command = `pnpm -parallel --filter "@rspack/*" dev`;
-					break;
-				default:
-					log.error(`invalid args, see "./x dev -h" to get more information`);
-					process.exit(1);
-			}
-			cp.execSync(command, {
-				stdio: "inherit"
-			});
-		});
-	cli
-		.command("build")
-		.option("binding", "build binding between rust and js")
-		.option("cli", "build @rspack/core which located in js side")
-		.option("bundle", "build example directory in rust side")
-		.option("webpack", "build webpack-example directory")
-		.option("js", "build all js library")
-		.option("examples", "build all rspack examples")
-		.action(args => {
-			let command;
-			switch (args) {
-				case "js":
-					command = `pnpm --filter "@rspack/*" build`;
-					break;
-				case "binding":
-					command = "pnpm --filter @rspack/binding build:debug";
-					break;
-				case "cli":
-					command = `pnpm --filter @rspack/binding build:debug && pnpm --filter "@rspack/*" build`;
-					break;
-				case "cli:release": // only build local release binary, for benchmark
-					command = `pnpm --filter @rspack/binding build:release && pnpm --filter "@rspack/*" build`;
-					break;
-				case "cli:release:all": // build for all cross platform, for release
-					command = `pnpm --filter @rspack/binding build:release:all && pnpm --filter "@rspack/*" build`;
-					break;
-				case "cli:debug": // only build local debug release, for local debug
-					command = `pnpm --filter @rspack/binding build:debug && pnpm --filter "@rspack/*" build`;
-					break;
-				case "bundle":
-					command = "cargo run --package rspack --example bundle";
-					break;
-				case "examples":
-					command = 'pnpm --filter "example-*" build';
-					break;
-				default:
-					log.error("invalid args, see `./x build -h` to get more information");
-					process.exit(1);
-			}
-			if (!command) {
-				return;
-			}
-			log.info(`start build by '${command}'`);
-			cp.execSync(command, {
-				stdio: "inherit"
-			});
-			log.info("build finished");
-		});
-
-	cli
-		.command("format")
-		.option("rs", "format rust code")
-		.option("js", "format js code")
-		.option("toml", "format toml code")
-		.action(args => {
-			let command;
-			switch (args) {
-				case "js":
-					command =
-						'npx prettier "packages/**/*.{ts,js}" "crates/rspack_plugin_runtime/**/*.{ts,js}" --check --write';
-					break;
-				case "rs":
-					command = "pnpm --filter @rspack/core... build";
-					break;
-				case "toml":
-					command =
-						"npx @taplo/cli format --check '.cargo/*.toml' './crates/**/Cargo.toml' './Cargo.toml'";
-					break;
-				default:
-					log.error(
-						"invalid args, see `./x format -h` to get more information"
-					);
-					process.exit(1);
-			}
-			if (!command) {
-				return;
-			}
-			log.info(`start format by '${command}'`);
-			cp.execSync(command, {
-				stdio: "inherit"
-			});
-			log.info("format finished");
-		});
-
-	cli
-		.command("lint")
-		.option("js", "lint js code")
-		.option("rs", "lint rust code")
-		.action(args => {
-			let commands = [];
-			switch (args) {
-				case "js":
-					commands = ['npx prettier "packages/**/*.{ts,js}" --check'];
-					break;
-				case "rs":
-					commands = [
-						"cargo clippy --all -- --deny warnings",
-						"node ./scripts/check_rust_dependency.js"
-					];
-					break;
-				default:
-					log.error(
-						"invalid args, see `./x format -h` to get more information"
-					);
-					process.exit(1);
-			}
-			commands.forEach(command => {
-				cp.execSync(command, {
-					stdio: "inherit"
-				});
-			});
-			log.info("lint finished");
-		});
-	cli
-		.command("clean")
-		.option("all", "clean all")
-		.option("dist", "clean build artifacts")
-		.option("npm", "clean node_modules")
-		.action(args => {
-			let commands = [];
-			let clean_npm = `rimraf node_modules && rimraf packages/**/node_modules`;
-			let clean_rust = `cargo clean`;
-			let clean_dist = `rimraf packages/**/{lib,dist}`;
-			log.info("start clean");
-			switch (args) {
-				case "all":
-					commands = [clean_npm, clean_rust, clean_dist];
-					break;
-				case "npm":
-					commands = [clean_npm];
-					break;
-				case "dist":
-					commands = [clean_dist];
-			}
-			commands.forEach(command => {
-				cp.execSync(command, {
-					stdio: "inherit"
-				});
-			});
-			log.info("finish clean");
-		});
-
-	cli
-		.command("script")
-		.option(
-			"update_swc_version",
-			"update all swc sub packages to the correct version"
-		)
-		.action(args => {
-			let commands = [];
-			switch (args) {
-				case "update_swc_version":
-					commands = ["node ./scripts/update_swc_version.js"];
-					break;
-				default:
-					log.error(
-						"invalid args, see `./x format -h` to get more information"
-					);
-					process.exit(1);
-			}
-			commands.forEach(command => {
-				cp.execSync(command, {
-					stdio: "inherit"
-				});
-			});
-			log.info("run script finished");
-		});
-	cli
-		.command("pkg-version")
-		.option("show package version for release note")
-		.action(args => {
-			const { version } = require("../packages/rspack-cli/package.json");
-			console.log(version);
-		});
-	return cli;
-}
-
-module.exports = { createCLI };
diff --git a/x b/x
deleted file mode 100755
index c68b26dbd93f..000000000000
--- a/x
+++ /dev/null
@@ -1,8 +0,0 @@
-#!/usr/bin/env node
-const { createCLI } = require("./scripts/cmd.js");
-
-/// use `./x --help` to get more information.
-void (function () {
-	const cli = createCLI();
-	cli.parse(process.argv);
-})();