diff --git a/README.md b/README.md index 8876464f..80690d38 100644 --- a/README.md +++ b/README.md @@ -12,7 +12,7 @@ sequencing (RRBS). These tools focus on overcoming the computing challenges imposed by the scale of genome-wide DNA methylation data, which is usually the early parts of data analysis. -## Installing release 1.1.0 +## Installing release 1.2.0 The documentation for DNMTools can be found [here](https://dnmtools.readthedocs.io). But if you want to install @@ -42,14 +42,14 @@ all the formatting. ### Configuration -* Download [dnmtools-1.1.0.tar.gz](https://github.com/smithlabcode/dnmtools/releases/download/v1.1.0/dnmtools-1.1.0.tar.gz). +* Download [dnmtools-1.2.0.tar.gz](https://github.com/smithlabcode/dnmtools/releases/download/v1.2.0/dnmtools-1.2.0.tar.gz). * Unpack the archive: ```console -$ tar -zxvf dnmtools-1.1.0.tar.gz +$ tar -zxvf dnmtools-1.2.0.tar.gz ``` * Move into the dnmtools directory and create a build directory: ```console -$ cd dnmtools-1.1.0 +$ cd dnmtools-1.2.0 $ mkdir build && cd build ``` * Run the configuration script: diff --git a/configure.ac b/configure.ac index 473753ad..1f4c4a34 100644 --- a/configure.ac +++ b/configure.ac @@ -14,7 +14,7 @@ dnl but WITHOUT ANY WARRANTY; without even the implied warranty of dnl MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU dnl General Public License for more details. -AC_INIT([dnmtools], [1.1.0], [andrewds@usc.edu], +AC_INIT([dnmtools], [1.2.0], [andrewds@usc.edu], [dnmtools], [https://github.com/smithlabcode/dnmtools]) dnl the config.h is not currently #included in the source, and only dnl used to keep command lines short. diff --git a/documentation/docs/quickstart.md b/documentation/docs/quickstart.md index e264fc2a..3f52959f 100644 --- a/documentation/docs/quickstart.md +++ b/documentation/docs/quickstart.md @@ -60,14 +60,14 @@ would need to be activated when you want to use dnmtools. ### Configuration -* Download [dnmtools-1.1.0.tar.gz](https://github.com/smithlabcode/dnmtools/releases/download/v1.1.0/dnmtools-1.1.0.tar.gz). +* Download [dnmtools-1.2.0.tar.gz](https://github.com/smithlabcode/dnmtools/releases/download/v1.2.0/dnmtools-1.2.0.tar.gz). * Unpack the archive: ```console -$ tar -zxvf dnmtools-1.1.0.tar.gz +$ tar -zxvf dnmtools-1.2.0.tar.gz ``` * Move into the dnmtools directory and create a build directory: ```console -$ cd dnmtools-1.1.0 +$ cd dnmtools-1.2.0 $ mkdir build && cd build ``` * Run the configuration script: diff --git a/src/dnmtools.cpp b/src/dnmtools.cpp index caf74365..342b54c3 100644 --- a/src/dnmtools.cpp +++ b/src/dnmtools.cpp @@ -1,17 +1,17 @@ -/* Copyright (C) 2022 University of Southern California and - * Andrew D. Smith +/* Copyright (C) 2022 University of Southern California and + * Andrew D. Smith and Guilherme Sena * - * Authors: Andrew D. Smith and Song Qiang and Guilherme Sena + * Authors: Andrew D. Smith and Song Qiang and Guilherme Sena * - * This program is free software: you can redistribute it and/or modify - * it under the terms of the GNU General Public License as published by - * the Free Software Foundation, either version 3 of the License, or - * (at your option) any later version. + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. * - * This program is distributed in the hope that it will be useful, - * but WITHOUT ANY WARRANTY; without even the implied warranty of - * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the - * GNU General Public License for more details. + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. */ #include @@ -25,7 +25,7 @@ using std::cout; using std::endl; #define PROGRAM_NAME "dnmtools" -#define PROGRAM_VERSION " 1.1.0" +#define PROGRAM_VERSION " 1.2.0" int abismal(int argc, const char **argv); int abismalidx(int argc, const char **argv);