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Need a tree data wrangler to handle trees from open tree #288

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cjgrady opened this issue May 12, 2022 · 0 comments
Open

Need a tree data wrangler to handle trees from open tree #288

cjgrady opened this issue May 12, 2022 · 0 comments
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enhancement New feature or request tools Tasks related to lmpy tools user Tasks related to users and user experience

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cjgrady commented May 12, 2022

Is your feature request related to a problem? Please describe.
Open Tree trees include ott ids in each tip. This causes things not to resolve and / or match other data. We could add a tree data wrangler to process trees as they come in from open tree and remove this extra information, or better, keep it in the metadata for each node but change the node label to just the species name.

@cjgrady cjgrady self-assigned this May 12, 2022
@cjgrady cjgrady added enhancement New feature or request user Tasks related to users and user experience tools Tasks related to lmpy tools labels May 12, 2022
@cjgrady cjgrady added this to the Version-3.2 milestone May 12, 2022
@cjgrady cjgrady removed this from the Version-3.2 milestone May 25, 2022
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