ENIGMA Shape Analysis (Dockerized)

A dockerized version of the ENIGMA Shape Analysis project from the University of Southern California (USC).

After pulling the image you need to fulfill these conditions:

• Have three separated folders:
  • A first folder for the groupfile.csv file (where the database description is contained)
  • A second folder containing the subjects after a recon-all processing with FreeSurfer
  • A third folder where the output of the shape processing is going to be stored.

You can also pull the image directly from Dockerhub

• https://hub.docker.com/r/sssilvar/eshape_fs/