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services/horizon: Parallelize db reingest range #2724

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merged 23 commits into from
Jun 29, 2020

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2opremio
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@2opremio 2opremio commented Jun 22, 2020

PR Checklist

PR Structure

  • This PR has reasonably narrow scope (if not, break it down into smaller PRs).
  • This PR avoids mixing refactoring changes with feature changes (split into two PRs
    otherwise).
  • This PR's title starts with name of package that is most changed in the PR, ex.
    services/friendbot, or all or doc if the changes are broad or impact many
    packages.

Thoroughness

  • This PR adds tests for the most critical parts of the new functionality or fixes.
  • I've updated any docs (developer docs, .md
    files, etc... affected by this change). Take a look in the docs folder for a given service,
    like this one.

Release planning

  • I've updated the relevant CHANGELOG (here for Horizon) if
    needed with deprecations, added features, breaking changes, and DB schema changes.
  • I've decided if this PR requires a new major/minor version according to
    semver, or if it's mainly a patch change. The PR is targeted at the next
    release branch if it's not a patch change.

What

This change breaks down the ledger range to reingest in subranges which are submitted to a pre-defined number of workers, processing the subranges in parallel.

For now, the workers are simply Go routines using their own System (with their own DB connections etc ...).

In the future workers could be fully fledged Horizon instances running in multiple machines (e.g. orchestrated through Kubernetes Jobs or AWS Batch Jobs).

New flags:
--parallel-workers: [optional] if this flag is set to > 1, horizon will parallelize reingestion using the supplied number of workers
--parallel-job-size: [optional] parallel workers will run jobs processing ledger batches of the supplied size

Why

We want reingestion to be faster. Addresses #2552

Known limitations

As I mentioned, this change only applies to a single machine. Running it in multiple machines will require further work.

This PR is targetting release-1.5.0 (since that's the base branch I used). We should retarget it to master (once release-1.5.0 is merged) before merging.

@2opremio 2opremio requested a review from a team June 22, 2020 16:16
@cla-bot cla-bot bot added the cla: yes label Jun 22, 2020
@2opremio 2opremio force-pushed the parallelize-ingestion branch 3 times, most recently from 867cc8a to a56a33d Compare June 23, 2020 14:08
services/horizon/CHANGELOG.md Outdated Show resolved Hide resolved
case <-ps.shutdown:
return
case reingestRange := <-ps.reingestJobQueue:
err := s.ReingestRange(reingestRange.from, reingestRange.to, false)
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ReingestRange is blocking so in case of the shutdown signal it will still need to finish it's job. Is it by design?

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What's the alternative?

requestedRange ledgerRange
}

type ParallelSystems struct {
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Can we move the code related to ParallelSystems to a separate file?

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I did it, but it's odd that a separate file imports symbols from main.go

services/horizon/internal/expingest/main.go Outdated Show resolved Hide resolved
services/horizon/internal/expingest/main.go Outdated Show resolved Hide resolved
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@bartekn PTAL. I addressed your comments, reincorporated --parallel-job-size (which will be needed for performance reasons when reingesting the full history) and added an extra test (TestParallelReingestRangeError())

@2opremio 2opremio force-pushed the parallelize-ingestion branch 2 times, most recently from 07200dc to 64f44a6 Compare June 24, 2020 13:46
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Added a comment with a proposal to make it simpler.


const (
historyCheckpointLedgerInterval = 64
minBatchSize = historyCheckpointLedgerInterval
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This is only needed in case of state ingestion (like in verify-range). It's totally fine to ingest ranges smaller than 64 ledgers. We should remove len(range) >= 64 restriction.

}

return firstErr
}
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@bartekn bartekn Jun 24, 2020

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I think we can simplify it more:

  • A single shutdown signal should be enough to handle everything.
  • We don't really need reingestJobResult this can be handled inside a worker function.
  • We don't need global wait group. Shutdown should just sent a shutdown signal and make ReingestRange method to wrap up.
  • We don't need to start workers when creating a method. Maybe we'll need workers in other methods than ReingestRange but now we don't.

After implementing the changes I have the following code:

func (ps *ParallelSystems) ReingestRange(fromLedger, toLedger uint32, batchSizeSuggestion uint32) error {
    var reingestJobQueue = make(chan ledgerRange)
    var erroredMutex sync.Mutex
    var errored bool

    func markError() {
        erroredMutex.Lock()
        errored = true
        erroredMutex.Unlock()
    }

    wg.Add(1)
    // can be moved to a method
    go func() {
        defer wg.Done()
        for subRangeFrom := fromLedger; subRangeFrom < toLedger; {
            // job queuing
            subRangeTo := subRangeFrom + (batchSize - 1) // we subtract one because both from and to are part of the batch
            if subRangeTo > toLedger {
                subRangeTo = toLedger
            }
            select {
            case <-ps.shutdown:
                return
            case reingestJobQueue <- ledgerRange{subRangeFrom, subRangeTo}:
            }
            subRangeFrom = subRangeTo + 1
        }
    }()

    for i := 0; i < workers; i++ {
        wg.Add(1)
        // can be moved to a method
        go func() {
            defer wg.Done()
            s, err := systemFactory(config)
            if err != nil {
                log.Error("...")
                s.Shutdown()
                markError()
                return
            }
            for {
                select {
                case <-ps.shutdown:
                    return
                case reingestRange := <-reingestJobQueue:
                    err := s.ReingestRange(reingestRange.from, reingestRange.to, false)
                    if err != nil {
                        log.Error("...")
                        s.Shutdown()
                        markError()
                        return
                    }
                }
            }
        }
    }

    wg.Wait()
    close(reingestJobQueue)

    if errored {
        return errors.New("one or more jobs failed")
    }
    return nil
}

func (ps *ParallelSystems) shutdown() {
    close(ps.shutdown)

}

func (ps *ParallelSystems) Shutdown() error {
	// sync.Once
	ps.shutdownOnce.Do(msr.shutdown)
	return nil
}

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@2opremio 2opremio Jun 24, 2020

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  • A single shutdown signal should be enough to handle everything.

Not if you have persistent workers (read below)

  • We don't really need reingestJobResult this can be handled inside a worker function.

Your example has oversimplified error management. If you want to give account of up until what point things where ingested properly (which I will implement shortly after this PR is merged), you need to know what ranges where successful.

  • We don't need global wait group. Shutdown should just sent a shutdown signal and make ReingestRange method to wrap up.

Not if you have persistent workers (read below)

  • We don't need to start workers when creating a method. Maybe we'll need workers in other methods than ReingestRange but now we don't.

I did it this way to that we can parallelize stress testing and normal history reingestion later on.

After implementing the changes I have the following code

I am not sure how msr or shutdownOnce are handled. Also, error management is oversimplified. As I mentioned above, you do need to consume the results to know what ranges where processed.

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@bartekn and I agreed that he will commit his suggestion and we will take it from there.

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bartekn commented Jun 24, 2020

OK, I pushed my code as discussed with @fons. I haven't updated tests, will do it after 👍 from you. I also added a code that return a suggested range to restart a job in case of failure. There's a comment above lowestRangeErr explaining why (I think) it works without having to keep track of results from all the jobs.


}

func (ps *ParallelSystems) Shutdown() error {
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I don't think it makes sense to have this anymore

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@2opremio 2opremio Jun 24, 2020

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In fact, having the ability to shutdown an in-progress reingestion will break error reporting (there won't be any guarantee of the lowest failing ledger range being reported since any remaining jobs can be aborted without reporting an error)

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Closing shutdown channel won't abort running jobs. If there's a running ReingestRange method in any worker it will complete (succeed or fail but will complete). Also, because the queue channel is unbuffered you won't have any remaining jobs in a buffer (the go routine adding new jobs will return due to <- ps.shutdown). Even if this was true, all jobs will complete because there's a wait group that blocks until all go routines return.

Can you elaborate?

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I think you are right, but I believe it's a bit brittle (prone to break if the code changes). It's probably a good idea to add a test to make it future-proof (a test in which there is an error and one of the pending jobs also errors). I am happy to add that.

Leaving that aside, I think we agree that Shutdown() is not needed anymore since there is no need to cancel running operations or cleanup anything.

}
lowestRangeErrMutex.Unlock()
}
ps.Shutdown()
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It's awkward that an operation shuts the whole ParallelSystems down. I would remove the global shutdown channel, create one here and pass it to the workers.

}, nil
}

func (ps *ParallelSystems) reingestWorker(reingestJobQueue <-chan ledgerRange) error {
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I would use a verb reingestWorker (e.g. runReingestWorker(), doReingestWork())

)

wg.Add(1)
go func() {
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I don't think there is a reason to do this in a separate goroutine. You could run the inner for loop after spawning the workers.

// Because of this when we reach `wg.Wait()` all jobs previously sent to a channel are processed (either success
// or failure). In case of a failure we save the range with the smallest sequence number because this is where
// the user needs to start again to prevent the gaps.
lowestRangeErr *rangeError
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this doesn't need to be a pointer (no strong opinions)

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@bartekn bartekn Jun 24, 2020

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If it wasn't a pointer we'd need another bool variable to determine if there was an error or not.

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you can use the error inside the rangeError (if it's nil then no error happened). But, as I said, no strong opinions here.

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bartekn commented Jun 25, 2020

@fons thanks for a quick review! I added the requested changes and fixed tests. It's great that we're at the same page when it comes to aborting jobs.

I removed Shutdown as requested: I agree it doesn't make sense to keep it now because we're not handling system shutdown signals at all in db reingest commands. However, I think it's worth doing this in a future so that users get a status update when they terminate the process manually.

I won't be available in the morning tomorrow so please update the code if there's something that's blocking you from merging it.

@2opremio 2opremio force-pushed the parallelize-ingestion branch 2 times, most recently from 5d41abd to db51fba Compare June 25, 2020 09:50
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2opremio commented Jun 25, 2020

I think we are done. This PR targets the 1.5.0 branch, but my plan is to hold off from merging to avoid disrupting the 1.5.0 release, and just wait until 1.5.0 is merged into master.

But, if @ire-and-curses / @abuiles are OK with it, I will merge now.

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Let's target this for 1.6 release.

@2opremio 2opremio force-pushed the parallelize-ingestion branch from 24f08a5 to 9713de2 Compare June 29, 2020 13:26
Base automatically changed from release-horizon-v1.5.0 to master June 29, 2020 19:22
@2opremio 2opremio changed the base branch from master to release-horizon-v1.6.0 June 29, 2020 19:28
2opremio and others added 23 commits June 29, 2020 21:34
This change breaks down the ledger range to reingest in subranges
which are submitted to a pre-defined number of workers, processing the
subranges in parallel.

For now, the workers are simply Go routines using their own `System`
(with their own DB connections etc ...).

In the future workers could be fully fledged Horizon instances running
in multiple machines (e.g. orchestrated through Kubernetes Jobs or AWS
Batch Jobs).

New flags:
--parallel-workers: [optional] if this flag is set to > 1, horizon will parallelize reingestion using the supplied number of workers
--parallel-job-size: [optional] parallel workers will run jobs processing ledger batches of the supplied size
@2opremio 2opremio force-pushed the parallelize-ingestion branch from 9713de2 to 526d03d Compare June 29, 2020 19:34
@2opremio 2opremio merged commit 4419539 into release-horizon-v1.6.0 Jun 29, 2020
@2opremio 2opremio deleted the parallelize-ingestion branch June 29, 2020 21:20
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4 participants