diff --git a/slamdunk/version.py b/slamdunk/version.py
index d437dc4..423593c 100644
--- a/slamdunk/version.py
+++ b/slamdunk/version.py
@@ -16,7 +16,7 @@
 # along with this program.  If not, see <http://www.gnu.org/licenses/>.
 
 # Overall slamDunk version
-__version__ = "0.3.2"
+__version__ = "0.3.3"
 # File format version of BAM files from slamdunk filter
 __bam_version__ = "3"
 # File format version of count files from slamdunk count