diff --git a/DESCRIPTION b/DESCRIPTION index 4b7739b6..875b86d7 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -19,6 +19,7 @@ Depends: Imports: bs4Dash (>= 2.3.3), cli (>= 3.6.3), + CompoundDb (>=1.6.0), crayon (>= 1.5.3), docopt (>= 0.7.1), dplyr (>= 1.1.4), @@ -60,7 +61,6 @@ Imports: yaml (>= 2.3.10) Suggests: BiocManager, - CompoundDb, knitr, pkgload, shinytest2, diff --git a/codemeta.json b/codemeta.json index d1e6d80c..1300e07f 100644 --- a/codemeta.json +++ b/codemeta.json @@ -55,18 +55,6 @@ }, "sameAs": "https://CRAN.R-project.org/package=BiocManager" }, - { - "@type": "SoftwareApplication", - "identifier": "CompoundDb", - "name": "CompoundDb", - "provider": { - "@id": "https://www.bioconductor.org", - "@type": "Organization", - "name": "Bioconductor", - "url": "https://www.bioconductor.org" - }, - "sameAs": "https://bioconductor.org/packages/release/bioc/html/CompoundDb.html" - }, { "@type": "SoftwareApplication", "identifier": "knitr", @@ -163,6 +151,19 @@ "sameAs": "https://CRAN.R-project.org/package=cli" }, "4": { + "@type": "SoftwareApplication", + "identifier": "CompoundDb", + "name": "CompoundDb", + "version": ">=1.6.0", + "provider": { + "@id": "https://www.bioconductor.org", + "@type": "Organization", + "name": "Bioconductor", + "url": "https://www.bioconductor.org" + }, + "sameAs": "https://bioconductor.org/packages/release/bioc/html/CompoundDb.html" + }, + "5": { "@type": "SoftwareApplication", "identifier": "crayon", "name": "crayon", @@ -175,7 +176,7 @@ }, "sameAs": "https://CRAN.R-project.org/package=crayon" }, - "5": { + "6": { "@type": "SoftwareApplication", "identifier": "docopt", "name": "docopt", @@ -188,7 +189,7 @@ }, "sameAs": "https://CRAN.R-project.org/package=docopt" }, - "6": { + "7": { "@type": "SoftwareApplication", "identifier": "dplyr", "name": "dplyr", @@ -201,7 +202,7 @@ }, "sameAs": "https://CRAN.R-project.org/package=dplyr" }, - "7": { + "8": { "@type": "SoftwareApplication", "identifier": "DT", "name": "DT", @@ -214,7 +215,7 @@ }, "sameAs": "https://CRAN.R-project.org/package=DT" }, - "8": { + "9": { "@type": "SoftwareApplication", "identifier": "fs", "name": "fs", @@ -227,7 +228,7 @@ }, "sameAs": "https://CRAN.R-project.org/package=fs" }, - "9": { + "10": { "@type": "SoftwareApplication", "identifier": "glue", "name": "glue", @@ -240,7 +241,7 @@ }, "sameAs": "https://CRAN.R-project.org/package=glue" }, - "10": { + "11": { "@type": "SoftwareApplication", "identifier": "gt", "name": "gt", @@ -253,7 +254,7 @@ }, "sameAs": "https://CRAN.R-project.org/package=gt" }, - "11": { + "12": { "@type": "SoftwareApplication", "identifier": "httr2", "name": "httr2", @@ -266,7 +267,7 @@ }, "sameAs": "https://CRAN.R-project.org/package=httr2" }, - "12": { + "13": { "@type": "SoftwareApplication", "identifier": "igraph", "name": "igraph", @@ -279,7 +280,7 @@ }, "sameAs": "https://CRAN.R-project.org/package=igraph" }, - "13": { + "14": { "@type": "SoftwareApplication", "identifier": "import", "name": "import", @@ -292,7 +293,7 @@ }, "sameAs": "https://CRAN.R-project.org/package=import" }, - "14": { + "15": { "@type": "SoftwareApplication", "identifier": "installr", "name": "installr", @@ -305,7 +306,7 @@ }, "sameAs": "https://CRAN.R-project.org/package=installr" }, - "15": { + "16": { "@type": "SoftwareApplication", "identifier": "jsonlite", "name": "jsonlite", @@ -318,7 +319,7 @@ }, "sameAs": "https://CRAN.R-project.org/package=jsonlite" }, - "16": { + "17": { "@type": "SoftwareApplication", "identifier": "lifecycle", "name": "lifecycle", @@ -331,7 +332,7 @@ }, "sameAs": "https://CRAN.R-project.org/package=lifecycle" }, - "17": { + "18": { "@type": "SoftwareApplication", "identifier": "MetaboCoreUtils", "name": "MetaboCoreUtils", @@ -344,7 +345,7 @@ }, "sameAs": "https://bioconductor.org/packages/release/bioc/html/MetaboCoreUtils.html" }, - "18": { + "19": { "@type": "SoftwareApplication", "identifier": "MsBackendMgf", "name": "MsBackendMgf", @@ -357,7 +358,7 @@ }, "sameAs": "https://bioconductor.org/packages/release/bioc/html/MsBackendMgf.html" }, - "19": { + "20": { "@type": "SoftwareApplication", "identifier": "MsBackendMsp", "name": "MsBackendMsp", @@ -370,7 +371,7 @@ }, "sameAs": "https://bioconductor.org/packages/release/bioc/html/MsBackendMsp.html" }, - "20": { + "21": { "@type": "SoftwareApplication", "identifier": "msentropy", "name": "msentropy", @@ -383,7 +384,7 @@ }, "sameAs": "https://CRAN.R-project.org/package=msentropy" }, - "21": { + "22": { "@type": "SoftwareApplication", "identifier": "pak", "name": "pak", @@ -396,7 +397,7 @@ }, "sameAs": "https://CRAN.R-project.org/package=pak" }, - "22": { + "23": { "@type": "SoftwareApplication", "identifier": "pbapply", "name": "pbapply", @@ -409,7 +410,7 @@ }, "sameAs": "https://CRAN.R-project.org/package=pbapply" }, - "23": { + "24": { "@type": "SoftwareApplication", "identifier": "pingr", "name": "pingr", @@ -422,7 +423,7 @@ }, "sameAs": "https://CRAN.R-project.org/package=pingr" }, - "24": { + "25": { "@type": "SoftwareApplication", "identifier": "R.utils", "name": "R.utils", @@ -435,7 +436,7 @@ }, "sameAs": "https://CRAN.R-project.org/package=R.utils" }, - "25": { + "26": { "@type": "SoftwareApplication", "identifier": "rlang", "name": "rlang", @@ -448,7 +449,7 @@ }, "sameAs": "https://CRAN.R-project.org/package=rlang" }, - "26": { + "27": { "@type": "SoftwareApplication", "identifier": "rotl", "name": "rotl", @@ -461,7 +462,7 @@ }, "sameAs": "https://CRAN.R-project.org/package=rotl" }, - "27": { + "28": { "@type": "SoftwareApplication", "identifier": "shiny", "name": "shiny", @@ -474,7 +475,7 @@ }, "sameAs": "https://CRAN.R-project.org/package=shiny" }, - "28": { + "29": { "@type": "SoftwareApplication", "identifier": "shinybusy", "name": "shinybusy", @@ -487,7 +488,7 @@ }, "sameAs": "https://CRAN.R-project.org/package=shinybusy" }, - "29": { + "30": { "@type": "SoftwareApplication", "identifier": "shinyhelper", "name": "shinyhelper", @@ -500,7 +501,7 @@ }, "sameAs": "https://CRAN.R-project.org/package=shinyhelper" }, - "30": { + "31": { "@type": "SoftwareApplication", "identifier": "shinyjs", "name": "shinyjs", @@ -513,7 +514,7 @@ }, "sameAs": "https://CRAN.R-project.org/package=shinyjs" }, - "31": { + "32": { "@type": "SoftwareApplication", "identifier": "shinyvalidate", "name": "shinyvalidate", @@ -526,7 +527,7 @@ }, "sameAs": "https://CRAN.R-project.org/package=shinyvalidate" }, - "32": { + "33": { "@type": "SoftwareApplication", "identifier": "shinyWidgets", "name": "shinyWidgets", @@ -539,7 +540,7 @@ }, "sameAs": "https://CRAN.R-project.org/package=shinyWidgets" }, - "33": { + "34": { "@type": "SoftwareApplication", "identifier": "Spectra", "name": "Spectra", @@ -552,12 +553,12 @@ }, "sameAs": "https://bioconductor.org/packages/release/bioc/html/Spectra.html" }, - "34": { + "35": { "@type": "SoftwareApplication", "identifier": "stats", "name": "stats" }, - "35": { + "36": { "@type": "SoftwareApplication", "identifier": "stringi", "name": "stringi", @@ -570,7 +571,7 @@ }, "sameAs": "https://CRAN.R-project.org/package=stringi" }, - "36": { + "37": { "@type": "SoftwareApplication", "identifier": "targets", "name": "targets", @@ -583,7 +584,7 @@ }, "sameAs": "https://CRAN.R-project.org/package=targets" }, - "37": { + "38": { "@type": "SoftwareApplication", "identifier": "tidyfst", "name": "tidyfst", @@ -596,7 +597,7 @@ }, "sameAs": "https://CRAN.R-project.org/package=tidyfst" }, - "38": { + "39": { "@type": "SoftwareApplication", "identifier": "tidytable", "name": "tidytable", @@ -609,12 +610,12 @@ }, "sameAs": "https://CRAN.R-project.org/package=tidytable" }, - "39": { + "40": { "@type": "SoftwareApplication", "identifier": "utils", "name": "utils" }, - "40": { + "41": { "@type": "SoftwareApplication", "identifier": "visNetwork", "name": "visNetwork", @@ -627,7 +628,7 @@ }, "sameAs": "https://CRAN.R-project.org/package=visNetwork" }, - "41": { + "42": { "@type": "SoftwareApplication", "identifier": "withr", "name": "withr", @@ -640,7 +641,7 @@ }, "sameAs": "https://CRAN.R-project.org/package=withr" }, - "42": { + "43": { "@type": "SoftwareApplication", "identifier": "yaml", "name": "yaml", @@ -656,7 +657,7 @@ "SystemRequirements": null }, "keywords": ["metaboliteannotation", "chemotaxonomy", "scoringsystem", "naturalproducts", "computationalmetabolomics", "taxonomicdistance", "specializedmetabolome"], - "fileSize": "3178.832KB", + "fileSize": "3178.842KB", "citation": [ { "@type": "ScholarlyArticle",