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Fix neighbors calculation #1233

Merged
merged 6 commits into from
Apr 12, 2024
Merged

Fix neighbors calculation #1233

merged 6 commits into from
Apr 12, 2024

Commits on Apr 12, 2024

  1. Update Scanpy neighbor computation 

    Remove redundant argument.
    @WeilerP
    WeilerP committed Apr 12, 2024
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  2. Update neighbor unit tests 

    Update according to latest API changes in scvelo and scanpy.
    @WeilerP
    WeilerP committed Apr 12, 2024
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  3. Add deprecation warnings 

    Add warning that neighbors and PCA will not be calculated automatically
in the future.
    @WeilerP
    WeilerP committed Apr 12, 2024
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  4. Update ground truth data

    @WeilerP
    WeilerP committed Apr 12, 2024
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  5. Update unit tests to latest changes

    @WeilerP
    WeilerP committed Apr 12, 2024
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  6. Update assertion accuracy

    @WeilerP
    WeilerP committed Apr 12, 2024
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