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<!DOCTYPE html>
<html lang="en">
<head>
<title>Galaxy Australia</title>
<meta property="og:title" content="" />
<meta property="og:description" content="" />
<meta property="og:image" content="/assets/media/galaxy-eu-logo.512.png" />
<meta name="description" content="The Australian Galaxy Instance">
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<meta charset="utf-8">
<meta http-equiv="X-UA-Compatible" content="IE=edge">
<link rel="stylesheet" href="/assets/css/bootstrap.min.css">
<link rel="stylesheet" href="/assets/css/main.css">
<link rel="canonical" href="https://usegalaxy-au.github.io/about.html">
<link rel="shortcut icon" href="/assets/media/galaxy-eu-logo.64.png" type="image/x-icon" />
<link rel="alternate" type="application/rss+xml" title="Galaxy Australia" href="/feed.xml">
<link href="/assets/css/font-awesome.min.css" rel="stylesheet" integrity="sha384-wvfXpqpZZVQGK6TAh5PVlGOfQNHSoD2xbE+QkPxCAFlNEevoEH3Sl0sibVcOQVnN" crossorigin="anonymous">
<script src="/assets/js/jquery-3.2.1.slim.min.js" integrity="sha256-k2WSCIexGzOj3Euiig+TlR8gA0EmPjuc79OEeY5L45g=" crossorigin="anonymous"></script>
<script src="/assets/js/bootstrap.min.js" integrity="sha256-U5ZEeKfGNOja007MMD3YBI0A3OSZOQbeG6z2f2Y0hu8=" crossorigin="anonymous"></script>
</head>
<body class="">
<div id="wrap">
<div id="main">
<div class="navbar">
<div class="container">
<div class="navbar-header">
<div class="navbar-brand">
<a href="/">
<img alt="Galaxy Australia Logo" src="/assets/media/Galaxy_australia_white.png" style="height: 40px"/>
</a>
</div>
<!-- <a class="navbar-brand" href="/" style="padding-left: 6px">
Galaxy Australia
</a>
-->
</div>
<div class="navbar-collapse collapse">
<ul class="nav navbar-nav navbar-right">
<!-- <li class="dropdown">
<a href="#" class="dropdown-toggle" data-toggle="dropdown" role="button" aria-haspopup="true" aria-expanded="true">Member Sites <span class="caret"></span></a>
<ul class="dropdown-menu">
</ul>
</li> -->
<li>
<a class="page-link" href="/news">News</a>
</li>
<li>
<a class="page-link" href="/events">Events</a>
</li>
<li>
<a class="page-link" href="/people">People</a>
</li>
<li>
<a class="page-link" href="/about">About</a>
</li>
<li>
<a class="page-link" href="/help">Support</a>
</li>
</ul>
</div>
</div>
</div>
<div class="container" id="maincontainer">
<h1 id="usegalaxyorgau"><a href="https://usegalaxy.org.au">usegalaxy.org.au</a></h1>
<p>The Galaxy Australia service is jointed maintained by QFAB (link) and Melbourne Bioinformatics (link) with funding from ARDC (managed by BPA) and ABC (links for all). The service allows Australian researchers access to:</p>
<ul>
<li>a huge compute and storage resource without any charge</li>
<li>free registration</li>
<li>600 GB for Australian researchers (100 GB for other registered users)</li>
<li>more than 600 different, well-documented and constantly maintained bioinformatics tools</li>
<li>no programming experience required</li>
</ul>
<p>Galaxy Australia maintains tools, workflows and reference datasets as requested by the Australian research community, making the platform the ideal place for Australian researchers to perform their analyses. If we do not currently support your specific application or species then we will endeavour to make it available, <a href="https://docs.google.com/forms/d/e/1FAIpQLSdXuarvkzFA5kRqoCfO8uiUGAB0PplfR4yvAfpCPSpdMcehmA/viewform">just ask</a>.</p>
<hr />
<h1 id="--usegalaxy"><i class="fa fa-gears"></i> UseGalaxy.*</h1>
<p><strong>Galaxy Australia</strong> is one of the large Galaxy servers that make up the <strong>usegalaxy.</strong>* initiative. Along with <strong>Galaxy Europe</strong> <a href="https://usegalaxy.eu">usegalaxy.eu</a> and <strong>Galaxy Main</strong> in the USA <a href="https://usegalaxy.org">usegalaxy.org</a>, the <strong>usegalaxy.</strong>* servers aim to provide a global publicly available bioinformatics resource, present a similar look and feel, similar installed tool sets and reference data and indices.</p>
<p>We do this via a network of globally distributed reference servers using the CernVM-FS and a few public git repositories. For more information on usegalaxy.* see the <a href="https://galaxyproject.org/usegalaxy/">Galaxy Project Community Hub</a></p>
<hr />
<h1 id="-visualisation--data-interpretation"><i class="fa fa-area-chart"></i> Visualisation & Data Interpretation</h1>
<p>Publication-ready visualisations can be instantly generated inside Galaxy. A variety of chart options (bar diagram, line charts, box plots) are available as default on any dataset capable of being graphed. Complex visualisation such as heatmaps, Venn diagrams, Krona plots can be made within Galaxy.</p>
<p>To explore -omics data, interactive visualisations are available:</p>
<ul>
<li>Integrated Genome Browser: Trackster</li>
<li>JBrowse, IGV</li>
</ul>
<hr />
<h1 id="-reproducibility--transparency"><i class="fa fa-sitemap"></i> Reproducibility & Transparency</h1>
<p>The Galaxy platform is built on a foundation of reproductivity and transparency. All manipulations of your data, from upload through to results and export are captured and easily documented for your long-term records. Citation lists associated with tools used is a one click activity.</p>
<p>Galaxy provides also a <strong>powerful workflow system</strong>. Workflows can be created by extraction of tools used from histories or built from scratch on an easy to use drag-and-drop canvas. Workflows are downloadable and sharable with everyone and contain all the necessary information to run the workflow, even as tools update (you get a time-locked workflow if tool versioning is a concern).</p>
<p>The thousands of tools are available with fixed versions and are managed by <a href="https://bioconda.github.io/">Bioconda</a> and <a href="https://biocontainers.pro/">BioContainers</a>.</p>
<p>4 TB of reference data are available on <a href="https://usegalaxy.org.au">https://usegalaxy.org.au</a> providing access to hundreds of reference genomes.</p>
<hr />
<h1 id="-citing-galaxy-australia"><i class="fa fa-mortar-board"></i> Citing Galaxy Australia.</h1>
<p>If your use of Galaxy Australia leads to a publication we are always happy to hear about it and would be happy to promote your work through the service. Email your success stories to the Service Manager (Dr Gareth Price, <a href="mailto://g.price@qfab.org">g.price@qfab.org</a>).</p>
</div>
</div>
</div>
<footer class="navbar-default">
<div class="container">
<div class="row">
<div class="col-lg-12" style="text-align:center">
<p>UseGalaxy.org.au is maintained largely by the <a href="/people">Australian Galaxy Team</a> including staff from QCIF, UQ-RCC and Melbourne Bioinformatics.
All content on this site is available under <a href="https://creativecommons.org/share-your-work/public-domain/cc0/" target="_blank">CC0-1.0</a>, unless otherwise specified.
Galaxy Australia is currently running Galaxy version 21.09 (September 2021)</p>
</div>
</div>
<div class="row">
<div class="col-lg-12" style="text-align:center">
<ul class="contact-info">
<li><i class="fa fa-envelope"></i><a href="mailto:help@genome.edu.au">help@genome.edu.au</a></li>
<li><i class="fa fa-github"></i><a href="https://github.com/usegalaxy-au" target="_blank">usegalaxy-au</a></li>
<li><i class="fa fa-twitter"></i><a href="https://twitter.com/galaxyaustralia" target="_blank">galaxyaustralia</a></li>
<!-- <li><i class="fa fa-rss"></i>Subscribe <a href="/feed.xml">via RSS (UseGalaxy.eu Feed)</a></li> -->
</ul>
</div>
</div>
</div>
</footer>
</body>
</html>