.. This file is managed by towncrier. .. towncrier release notes start BrainIAK 0.7.1 (2018-02-20) =========================== Features -------- - reprsimil: Changed the default optimizer of (G)BRSA to L-BFGD-B. (`#337 <https://github.com/brainiak/brainiak/pull/337>`_) Bugfixes -------- - eventseg: Fixed bug that was causing fits to be asymmetric (`#339 <https://github.com/brainiak/brainiak/issues/339>`_) Documentation improvements -------------------------- - reprsimil: Added explanation that both BRSA and GBRSA assume zero-mean in the distribution of beta patterns. (`#337 <https://github.com/brainiak/brainiak/pull/337>`_) BrainIAK 0.7 (2018-02-12) ========================= Features -------- - funcalign: Added the Robust Shared Response Model method. (`#302 <https://github.com/brainiak/brainiak/issues/302>`_) - fmrisim: Update convolution and drift. (`#309 <https://github.com/brainiak/brainiak/pull/309>`_) - eventseg: Added option to compute p values for ISC and ISFC (`#310 <https://github.com/brainiak/brainiak/issues/310>`_) - Added Conda packages. (`#328 <https://github.com/brainiak/brainiak/issues/328>`_) Documentation improvements -------------------------- - Updated the searchlight API docs. (`#324 <https://github.com/brainiak/brainiak/issues/324>`_) BrainIAK 0.6 (2017-11-10) ========================= Features -------- - reprsimil: Add Group Bayesian RSA, add transform (decoding) and score (model selection) functions, add automatic determination of the number of necessary nuisance regressors. utils: modified gen_design to make the generated design matrix approximately scaled in amplitudes. (`#194 <https://github.com/brainiak/brainiak/issues/194>`_) - searchlight: Improved performance via tweaked multiprocessing usage. (`#240 <https://github.com/brainiak/brainiak/issues/240>`_) - fmrisim: Updated drift calculation and masking. (`#244 <https://github.com/brainiak/brainiak/pull/244>`_) - eventseg: Add set_event_patterns() and notebook example (`#266 <https://github.com/brainiak/brainiak/issues/266>`_) - Added a Docker image for testing BrainIAK without installing. (`#272 <https://github.com/brainiak/brainiak/issues/272>`_) - eventseg: Fixed numerical instability bug, added utility function for weighted variance (`#292 <https://github.com/brainiak/brainiak/issues/292>`_) - Restricted multiprocessing to the available number of CPUs. (`#293 <https://github.com/brainiak/brainiak/issues/293>`_) Bugfixes -------- - searchlight: Do not use ``sys.exit``. (`#156 <https://github.com/brainiak/brainiak/issues/156>`_) - reprsimil: Follow random number guidelines. (`#239 <https://github.com/brainiak/brainiak/issues/239>`_) Deprecations and removals ------------------------- - Changed GitHub organization to BrainIAK. Update your remote URLs. (`#277 <https://github.com/brainiak/brainiak/issues/277>`_) BrainIAK 0.5 (2017-05-23) ========================= Features -------- - FCMA partial similarity matrix option. (`#168 <https://github.com/brainiak/brainiak/issues/168>`_) - Faster FCMA cross validation via multiprocessing. (`#176 <https://github.com/brainiak/brainiak/issues/176>`_) - Inter-subject correlation (ISC) and inter-subject functional correlation (ISFC). (`#183 <https://github.com/brainiak/brainiak/issues/183>`_) - Input/output and image modules with high-level APIs. (`#209 <https://github.com/brainiak/brainiak/pull/209>`_) - FCMA support for random permutations. (`#217 <https://github.com/brainiak/brainiak/issues/217>`_) - A distributed version of SRM. (`#220 <https://github.com/brainiak/brainiak/issues/220>`_) - Shape masks for the searchlight. (`#221 <https://github.com/brainiak/brainiak/issues/221>`_) Deprecations and removals ------------------------- - Changed fmrisim to compute signal-to-fluctuation-noise ratio (SFNR) instead of signal-to-noise ratio (SNR). (`#224 <https://github.com/brainiak/brainiak/issues/224>`_) BrainIAK 0.4 (2017-01-19) ========================= Features -------- - Distributed searchlight. (`#148 <https://github.com/brainiak/brainiak/issues/148>`_) - Multi-voxel pattern analysis (MVPA) support in FCMA. (`#154 <https://github.com/brainiak/brainiak/issues/154>`_, `#157 <https://github.com/brainiak/brainiak/pull/157)>`_) - Fast Pearson correlation coefficient computation. (`#159 <https://github.com/brainiak/brainiak/issues/159>`_) BrainIAK 0.3.2 (2016-10-31) =========================== Features -------- - Faster event segmentation via Cython implementation. (`#111 <https://github.com/brainiak/brainiak/pull/111>`_) - fMRI data simulator (fmrisim). (`#135 <https://github.com/brainiak/brainiak/pull/135>`_) BrainIAK 0.3.1 (2016-09-30) =========================== Features -------- - Event segmentation. (`#72 <https://github.com/brainiak/brainiak/issues/72>`_) - Full correlation matrix analysis (FCMA). (`#97 <https://github.com/brainiak/brainiak/issues/97>`_, `#122 <https://github.com/brainiak/brainiak/pull/122>`_) - Bayesian representational similarity analysis (BRSA). (`#98 <https://github.com/brainiak/brainiak/issues/98>`_) - Deterministic SRM. (`#102 <https://github.com/brainiak/brainiak/issues/102>`_) - Semi-supervised shared response model (SSSRM). (`#108 <https://github.com/brainiak/brainiak/issues/108>`_) BrainIAK 0.3 (2016-09-30) [YANKED] ================================== BrainIAK 0.2 (2016-08-03) ========================= Features -------- - Hyperparameter optimization. (`#58 <https://github.com/brainiak/brainiak/pull/58>`_) Deprecations and removals ------------------------- - Removed ``_`` from package names. (`#73 <https://github.com/brainiak/brainiak/issues/73>`_) BrainIAK 0.1 (2016-07-12) ========================= Features -------- - Initial release, including: * Shared response model (SRM). * Topographic factor analysis (TFA) and hierarchical topographical factor analysis (HTFA).