diff --git a/README.md b/README.md index 143c050..30f8417 100644 --- a/README.md +++ b/README.md @@ -4,3 +4,23 @@ [![Dev](https://img.shields.io/badge/docs-dev-blue.svg)](https://yuehhua.github.io/CDGRNs.jl/dev/) [![Build Status](https://github.com/yuehhua/CDGRNs.jl/actions/workflows/test.yml/badge.svg?branch=main)](https://github.com/yuehhua/CDGRNs.jl/actions/workflows/test.yml?query=branch%3Amain) [![Coverage](https://codecov.io/gh/yuehhua/CDGRNs.jl/branch/main/graph/badge.svg)](https://codecov.io/gh/yuehhua/CDGRNs.jl) + +CDGRNs.jl provides implementation of Context-Dependent Gene Regulatory Networks (CDGRN) model in Julia. This package provides basic functionalities and examples are work in progress. + + +## Citation + +``` +@article{10.1093/bib/bbac633, + author = {Tu, Yueh-Hua and Juan, Hsueh-Fen and Huang, Hsuan-Cheng}, + title = "{Context-dependent gene regulatory network reveals regulation dynamics and cell trajectories using unspliced transcripts}", + journal = {Briefings in Bioinformatics}, + year = {2023}, + month = {01}, + issn = {1477-4054}, + doi = {10.1093/bib/bbac633}, + url = {https://doi.org/10.1093/bib/bbac633}, + note = {bbac633}, + eprint = {https://academic.oup.com/bib/advance-article-pdf/doi/10.1093/bib/bbac633/48757164/bbac633.pdf}, +} +```