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Update CMakeLists.txt files to use imported targets (NOAA-EMC#172)
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Top level CMakeLists.txt and CMakeLists.txt file in FV3 have been changed (and cleaned up) to use imported targets (mostly for NCEPLIBS).
Remove *.appBuilder compsets and log.
Remove outdated doc directory
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@DusanJovic-NOAA
DusanJovic-NOAA authored Jul 28, 2020
1 parent c6b3566 commit aa07631
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Showing 119 changed files with 1,345 additions and 128,821 deletions.
10 changes: 0 additions & 10 deletions CCPP.appBuilder
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10 changes: 0 additions & 10 deletions CCPP_repro.appBuilder
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281 changes: 139 additions & 142 deletions CMakeLists.txt
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Original file line number Diff line number Diff line change
@@ -1,9 +1,7 @@
cmake_minimum_required(VERSION 3.15)

foreach(env_var IN ITEMS
CMAKE_C_COMPILER CMAKE_CXX_COMPILER CMAKE_Fortran_COMPILER
CMAKE_Platform)
if ( NOT DEFINED ENV{${env_var}})
foreach(env_var IN ITEMS CMAKE_C_COMPILER CMAKE_CXX_COMPILER CMAKE_Fortran_COMPILER)
if(NOT DEFINED ENV{${env_var}})
message(FATAL_ERROR "${env_var} is not defined")
endif()
endforeach()
Expand All @@ -18,10 +16,68 @@ project(ufs-weather-model
LANGUAGES C CXX Fortran)

list(APPEND CMAKE_MODULE_PATH ${CMAKE_SOURCE_DIR}/cmake)
find_package(MPI REQUIRED)
find_package(ESMF REQUIRED)

include(${PROJECT_SOURCE_DIR}/cmake/configure_${CMAKE_Platform}.cmake)
set(32BIT OFF CACHE BOOL "Enable 32BIT (single precision arithmetic in dycore)")
set(AVX2 ON CACHE BOOL "Enable AVX2 instruction set")
set(CCPP ON CACHE BOOL "Enable CCPP")
set(DEBUG OFF CACHE BOOL "Enable DEBUG mode")
set(INLINE_POST OFF CACHE BOOL "Enable inline post")
set(MULTI_GASES OFF CACHE BOOL "Enable MULTI_GASES")
set(OPENMP ON CACHE BOOL "Enable OpenMP threading")
set(PARALLEL_NETCDF OFF CACHE BOOL "Enable parallel NetCDF")
set(QUAD_PRECISION ON CACHE BOOL "Enable QUAD_PRECISION (for certain grid metric terms in dycore)")
set(REPRO OFF CACHE BOOL "Enable REPRO mode")
set(WW3 OFF CACHE BOOL "Enable WW3")

if(CMAKE_Platform)
message("")
if(EXISTS ${PROJECT_SOURCE_DIR}/cmake/configure_${CMAKE_Platform}.cmake)
message("Setting configuration for ${CMAKE_Platform}")
include(${PROJECT_SOURCE_DIR}/cmake/configure_${CMAKE_Platform}.cmake)
else()
message("Platform '${CMAKE_Platform}' configuration file does not exist")
endif()
endif()

message("")
message("32BIT ............ ${32BIT}")
message("AVX2 ............. ${AVX2}")
message("CCPP ............. ${CCPP}")
message("DEBUG ............ ${DEBUG}")
message("INLINE_POST ...... ${INLINE_POST}")
message("MULTI_GASES ...... ${MULTI_GASES}")
message("OPENMP ........... ${OPENMP}")
message("PARALLEL_NETCDF .. ${PARALLEL_NETCDF}")
message("QUAD_PRECISION ... ${QUAD_PRECISION}")
message("REPRO ............ ${REPRO}")
message("WW3 .............. ${WW3}")
message("")

get_filename_component (C_COMPILER_NAME ${CMAKE_C_COMPILER} NAME)
get_filename_component (CXX_COMPILER_NAME ${CMAKE_CXX_COMPILER} NAME)
get_filename_component (Fortran_COMPILER_NAME ${CMAKE_Fortran_COMPILER} NAME)
message("C compiler: ${CMAKE_C_COMPILER_ID} ${CMAKE_C_COMPILER_VERSION} (${C_COMPILER_NAME})")
message("CXX compiler: ${CMAKE_CXX_COMPILER_ID} ${CMAKE_CXX_COMPILER_VERSION} (${CXX_COMPILER_NAME})")
message("Fortran compiler: ${CMAKE_Fortran_COMPILER_ID} ${CMAKE_Fortran_COMPILER_VERSION} (${Fortran_COMPILER_NAME})")
message("")

include(cmake/${CMAKE_Fortran_COMPILER_ID}.cmake)
message("")

find_package(NetCDF REQUIRED C Fortran)
find_package(MPI REQUIRED)
find_package(ESMF MODULE REQUIRED)

find_package(bacio REQUIRED)
find_package(nemsio REQUIRED)
find_package(sp REQUIRED)
find_package(w3emc REQUIRED)
find_package(w3nco REQUIRED)
if(INLINE_POST)
find_package(nceppost REQUIRED)
endif()
# See https://github.com/NOAA-EMC/NCEPLIBS-nemsio/pull/22
target_link_libraries(nemsio::nemsio INTERFACE w3emc::w3emc_d bacio::bacio_4)

add_definitions(-Duse_libMPI)
add_definitions(-Duse_netCDF)
Expand All @@ -36,7 +92,7 @@ add_definitions(-DUSE_COND)
add_definitions(-DNEW_TAUCTMAX)
add_definitions(-DINTERNAL_FILE_NML)

if (CMAKE_Fortran_COMPILER_ID MATCHES "GNU" AND CMAKE_Fortran_COMPILER_VERSION VERSION_LESS 9.0.0)
if (CMAKE_Fortran_COMPILER_ID MATCHES "GNU" AND CMAKE_Fortran_COMPILER_VERSION VERSION_LESS 9.0.0)
message(FATAL_ERROR "GNU Compiler >= 9 is required")
endif()

Expand Down Expand Up @@ -95,103 +151,16 @@ endif()
###############################################################################
### FMS
###############################################################################
add_library(
fms

FMS/amip_interp/amip_interp.F90
FMS/astronomy/astronomy.F90
FMS/axis_utils/axis_utils.F90
FMS/axis_utils/axis_utils2.F90
FMS/block_control/block_control.F90
FMS/column_diagnostics/column_diagnostics.F90
FMS/constants/constants.F90
FMS/coupler/atmos_ocean_fluxes.F90
FMS/coupler/coupler_types.F90
FMS/coupler/ensemble_manager.F90
FMS/data_override/data_override.F90
FMS/diag_integral/diag_integral.F90
FMS/diag_manager/diag_axis.F90
FMS/diag_manager/diag_data.F90
FMS/diag_manager/diag_grid.F90
FMS/diag_manager/diag_manager.F90
FMS/diag_manager/diag_output.F90
FMS/diag_manager/diag_table.F90
FMS/diag_manager/diag_util.F90
FMS/drifters/cloud_interpolator.F90
FMS/drifters/drifters.F90
FMS/drifters/drifters_comm.F90
FMS/drifters/drifters_core.F90
FMS/drifters/drifters_input.F90
FMS/drifters/drifters_io.F90
FMS/drifters/quicksort.F90
FMS/exchange/stock_constants.F90
FMS/exchange/xgrid.F90
FMS/field_manager/field_manager.F90
FMS/field_manager/fm_util.F90
FMS/fms/fms.F90
FMS/fms/fms_io.F90
FMS/fms2_io/blackboxio.F90
FMS/fms2_io/fms2_io.F90
FMS/fms2_io/fms_io_utils.F90
FMS/fms2_io/fms_netcdf_domain_io.F90
FMS/fms2_io/fms_netcdf_unstructured_domain_io.F90
FMS/fms2_io/netcdf_io.F90
FMS/horiz_interp/horiz_interp.F90
FMS/horiz_interp/horiz_interp_bicubic.F90
FMS/horiz_interp/horiz_interp_bilinear.F90
FMS/horiz_interp/horiz_interp_conserve.F90
FMS/horiz_interp/horiz_interp_spherical.F90
FMS/horiz_interp/horiz_interp_type.F90
FMS/interpolator/interpolator.F90
FMS/memutils/memutils.F90
FMS/monin_obukhov/monin_obukhov.F90
FMS/monin_obukhov/monin_obukhov_kernel.F90
FMS/mosaic/gradient.F90
FMS/mosaic/grid.F90
FMS/mosaic/mosaic.F90
FMS/mosaic/mosaic2.F90
FMS/mpp/mpp.F90
FMS/mpp/mpp_data.F90
FMS/mpp/mpp_domains.F90
FMS/mpp/mpp_efp.F90
FMS/mpp/mpp_io.F90
FMS/mpp/mpp_memutils.F90
FMS/mpp/mpp_parameter.F90
FMS/mpp/mpp_pset.F90
FMS/mpp/mpp_utilities.F90
FMS/platform/platform.F90
FMS/random_numbers/MersenneTwister.F90
FMS/random_numbers/random_numbers.F90
FMS/sat_vapor_pres/sat_vapor_pres.F90
FMS/sat_vapor_pres/sat_vapor_pres_k.F90
FMS/time_interp/time_interp.F90
FMS/time_interp/time_interp_external.F90
FMS/time_interp/time_interp_external2.F90
FMS/time_manager/get_cal_time.F90
FMS/time_manager/time_manager.F90
FMS/topography/gaussian_topog.F90
FMS/topography/topography.F90
FMS/tracer_manager/tracer_manager.F90
FMS/tridiagonal/tridiagonal.F90

FMS/mosaic/create_xgrid.c
FMS/mosaic/gradient_c2l.c
FMS/mosaic/interp.c
FMS/mosaic/mosaic_util.c
FMS/mosaic/read_mosaic.c
FMS/mpp/mpp_memuse.c
FMS/mpp/nsclock.c
FMS/mpp/threadloc.c
)
# stupid cmake can not figure out dependency of fft.F90 on fft99.F90 because 'use fft99_mod' is inside ifdefs
set_property(SOURCE FMS/fft/fft.F90 APPEND_STRING PROPERTY COMPILE_FLAGS "-DSGICRAY=0 -DNAGFFT=0")

target_include_directories(fms PUBLIC ${PROJECT_SOURCE_DIR}/FMS/include FMS/include FMS/fms FMS/fms2_io/include FMS/mpp/include)
target_include_directories(fms PRIVATE ${NETCDF_INC_DIR})

include(fms_files.cmake)
add_library(fms ${fms_src_files})
target_include_directories(fms PUBLIC $<BUILD_INTERFACE:${PROJECT_SOURCE_DIR}/FMS/include>
$<BUILD_INTERFACE:${PROJECT_SOURCE_DIR}/FMS/fms>
$<BUILD_INTERFACE:${PROJECT_SOURCE_DIR}/FMS/fms2_io/include>
$<BUILD_INTERFACE:${PROJECT_SOURCE_DIR}/FMS/mpp/include>)
target_link_libraries(fms PRIVATE NetCDF::NetCDF_Fortran)
set_target_properties(fms PROPERTIES ARCHIVE_OUTPUT_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/FMS)
set_target_properties(fms PROPERTIES Fortran_MODULE_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/FMS/mod)
target_include_directories(fms PUBLIC ${CMAKE_CURRENT_BINARY_DIR}/FMS/mod)
target_include_directories(fms PUBLIC $<BUILD_INTERFACE:${CMAKE_CURRENT_BINARY_DIR}/FMS/mod>)

###############################################################################
### FV3
Expand All @@ -210,34 +179,24 @@ if(WW3)
set(WW3_COMP "orion")
endif()
message("Build WW3:")
message(" run: ${CMAKE_BUILD_TOOL} WW3_PARCOMPN=4 WW3_COMP=${WW3_COMP} ww3_nems")
message(" run: ${CMAKE_BUILD_TOOL} WW3_PARCOMPN=4 WW3_COMP=${WW3_COMP} ww3_nemslibonly")
message(" in: ${PROJECT_SOURCE_DIR}/WW3/model/esmf")
message("")

add_custom_target(ww3_nems
WORKING_DIRECTORY ${PROJECT_SOURCE_DIR}/WW3/model/esmf
COMMAND ${CMAKE_BUILD_TOOL} WW3_PARCOMPN=4 WW3_COMP=${WW3_COMP} ww3_nems > make.log 2>&1
COMMAND ${CMAKE_BUILD_TOOL} WW3_PARCOMPN=4 WW3_COMP=${WW3_COMP} ww3_nemslibonly > ${PROJECT_BINARY_DIR}/ww3_make.log 2>&1
)

set(WW3_LIBS ${PROJECT_SOURCE_DIR}/WW3/model/obj/libww3_multi_esmf.a)
endif()

###############################################################################
### NEMS
### NEMS (ufs-weather-model-lib)
###############################################################################
configure_file(${PROJECT_SOURCE_DIR}/NEMS/src/ESMFVersionDefine_ESMF_NUOPC.h
${PROJECT_BINARY_DIR}/NEMS/src/ESMFVersionDefine.h
COPYONLY)
# until we remove "../ESMFVersionDefine.h" from ENS_Cpl/ENS_CplComp_ESMFMod_STUB.F90
configure_file(${PROJECT_SOURCE_DIR}/NEMS/src/ESMFVersionDefine_ESMF_NUOPC.h
${PROJECT_BINARY_DIR}/NEMS/ESMFVersionDefine.h
COPYONLY)
configure_file(${PROJECT_SOURCE_DIR}/NEMS/src/ESMFConvenienceMacros.h
${PROJECT_BINARY_DIR}/NEMS/src/ESMFConvenienceMacros.h
COPYONLY)

add_executable(
NEMS.exe
add_library(
ufs-weather-model-lib

NEMS/src/MAIN_NEMS.F90
NEMS/src/module_NEMS_UTILS.F90
NEMS/src/module_MEDIATOR_methods.F90
NEMS/src/module_MEDIATOR.F90
Expand All @@ -250,41 +209,79 @@ add_executable(
NEMS/src/nems_c_rusage.c
NEMS/src/ENS_Cpl/ENS_CplComp_ESMFMod_STUB.F90
)
add_dependencies(ufs-weather-model-lib fv3atm)
target_link_libraries(ufs-weather-model-lib PRIVATE esmf)

target_compile_definitions(NEMS.exe PRIVATE -DESMF_VERSION_MAJOR=${ESMF_VERSION_MAJOR})
target_compile_definitions(NEMS.exe PRIVATE -DFRONT_FMS)
target_compile_definitions(NEMS.exe PRIVATE -DFRONT_FV3=fv3gfs_cap_mod)
target_compile_definitions(ufs-weather-model-lib PRIVATE -DESMF_VERSION_MAJOR=${ESMF_VERSION_MAJOR})
target_compile_definitions(ufs-weather-model-lib PRIVATE -DFRONT_FMS)
target_compile_definitions(ufs-weather-model-lib PRIVATE -DFRONT_FV3=fv3gfs_cap_mod)

target_include_directories(ufs-weather-model-lib PRIVATE ${PROJECT_BINARY_DIR}/NEMS/src)
target_include_directories(ufs-weather-model-lib PRIVATE ${CMAKE_CURRENT_BINARY_DIR}/FV3/mod)
target_include_directories(ufs-weather-model-lib PRIVATE ${CMAKE_CURRENT_BINARY_DIR}/FMS/mod)

if(WW3)
target_compile_definitions(ufs-weather-model-lib PRIVATE -DFRONT_WW3=WMESMFMD)
target_include_directories(ufs-weather-model-lib PRIVATE ${PROJECT_SOURCE_DIR}/WW3/model/mod)
set_target_properties(ufs-weather-model-lib PROPERTIES Fortran_MODULE_DIRECTORY ${PROJECT_SOURCE_DIR}/WW3/model/mod)
add_dependencies(ufs-weather-model-lib ww3_nems)
endif()

set_target_properties(ufs-weather-model-lib PROPERTIES Fortran_MODULE_DIRECTORY ${PROJECT_BINARY_DIR}/mod)
target_include_directories(ufs-weather-model-lib PUBLIC $<BUILD_INTERFACE:${CMAKE_CURRENT_BINARY_DIR}/mod>
$<BUILD_INTERFACE:${CMAKE_CURRENT_BINARY_DIR}/FV3/mod>
$<INSTALL_INTERFACE:${CMAKE_INSTALL_PREFIX}/mod>)

configure_file(${PROJECT_SOURCE_DIR}/NEMS/src/ESMFVersionDefine_ESMF_NUOPC.h
${PROJECT_BINARY_DIR}/NEMS/src/ESMFVersionDefine.h
COPYONLY)
# until we remove "../ESMFVersionDefine.h" from ENS_Cpl/ENS_CplComp_ESMFMod_STUB.F90
configure_file(${PROJECT_SOURCE_DIR}/NEMS/src/ESMFVersionDefine_ESMF_NUOPC.h
${PROJECT_BINARY_DIR}/NEMS/ESMFVersionDefine.h
COPYONLY)
configure_file(${PROJECT_SOURCE_DIR}/NEMS/src/ESMFConvenienceMacros.h
${PROJECT_BINARY_DIR}/NEMS/src/ESMFConvenienceMacros.h
COPYONLY)

target_include_directories(NEMS.exe PRIVATE ${ESMF_MOD} )
target_link_libraries(ufs-weather-model-lib PUBLIC fv3atm)

###############################################################################
### UFS executable
###############################################################################
add_executable(NEMS.exe
NEMS/src/MAIN_NEMS.F90
)
add_dependencies(NEMS.exe ufs-weather-model-lib)

target_compile_definitions(NEMS.exe PRIVATE -DESMF_VERSION_MAJOR=${ESMF_VERSION_MAJOR})
target_include_directories(NEMS.exe PRIVATE ${PROJECT_BINARY_DIR}/NEMS/src)

set_target_properties(NEMS.exe PROPERTIES Fortran_MODULE_DIRECTORY ${PROJECT_BINARY_DIR}/NEMS/mod)
set_target_properties(NEMS.exe PROPERTIES Fortran_MODULE_DIRECTORY ${PROJECT_BINARY_DIR}/mod)

if(WW3)
target_compile_definitions(NEMS.exe PRIVATE -DFRONT_WW3=WMESMFMD)
set_target_properties(NEMS.exe PROPERTIES Fortran_MODULE_DIRECTORY ${PROJECT_SOURCE_DIR}/WW3/model/mod)
set(WW3_LIBS ${PROJECT_SOURCE_DIR}/WW3/model/obj/libww3_multi_esmf.a)
add_dependencies(NEMS.exe ww3_nems)
endif()

if(CCPP)
set(CCPP_LIBRARIES ccppdriver ccppphys ccpp)
else()
set(IPD_LIBRARIES ipd)
endif()

target_link_libraries(NEMS.exe
fv3cap
fv3core
io
${IPD_LIBRARIES}
gfsphysics
${CCPP_LIBRARIES}
fv3cpl
stochastic_physics
fms
ufs-weather-model-lib
${WW3_LIBS}
${NCEP_LIBS} ${ESMF_LIBS} ${NETCDF_LIBS} ${MKL_LIB})
esmf NetCDF::NetCDF_Fortran ${MKL_LIB})

###############################################################################
### Install
###############################################################################
install(
TARGETS ufs-weather-model-lib fms
EXPORT ufs-weather-model-lib-config
LIBRARY DESTINATION lib
ARCHIVE DESTINATION lib)
install(DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}/mod DESTINATION ${CMAKE_INSTALL_PREFIX})

install(EXPORT ufs-weather-model-lib-config
DESTINATION lib/cmake
)

###############################################################################
### done
Expand Down
2 changes: 1 addition & 1 deletion FV3
Submodule FV3 updated 7 files
+72 −38 CMakeLists.txt
+1 −1 ccpp/driver/CMakeLists.txt
+4 −5 cpl/CMakeLists.txt
+4 −3 gfsphysics/CMakeLists.txt
+10 −9 io/CMakeLists.txt
+3 −2 ipd/CMakeLists.txt
+4 −3 stochastic_physics/CMakeLists.txt
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