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add zntrack.apply (#798)
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* add "zntrack.apply"

* rename class name

* update docstrings

* fix eager
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PythonFZ authored May 14, 2024
1 parent d2170df commit d6f96e9
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Showing 7 changed files with 84 additions and 4 deletions.
28 changes: 28 additions & 0 deletions tests/integration/test_apply.py
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@@ -0,0 +1,28 @@
"""Test the apply function."""

import pytest

import zntrack.examples


@pytest.mark.parametrize("eager", [True, False])
def test_apply(proj_path, eager) -> None:
"""Test the "zntrack.apply" function."""
project = zntrack.Project()

JoinedParamsToOuts = zntrack.apply(zntrack.examples.ParamsToOuts, "join")

with project:
a = zntrack.examples.ParamsToOuts(params=["a", "b"])
b = JoinedParamsToOuts(params=["a", "b"])
c = zntrack.apply(zntrack.examples.ParamsToOuts, "join")(params=["a", "b", "c"])

project.run(eager=eager)

a.load()
b.load()
c.load()

assert a.outs == ["a", "b"]
assert b.outs == "a-b"
assert c.outs == "a-b-c"
2 changes: 2 additions & 0 deletions zntrack/__init__.py
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Expand Up @@ -24,6 +24,7 @@
)
from zntrack.project import Project
from zntrack.utils import config
from zntrack.utils.apply import apply
from zntrack.utils.node_wd import nwd

__version__ = importlib.metadata.version("zntrack")
Expand All @@ -45,6 +46,7 @@
"exceptions",
"from_rev",
"get_nodes",
"apply",
]

__all__ += [
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18 changes: 16 additions & 2 deletions zntrack/cli/__init__.py
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Expand Up @@ -47,10 +47,23 @@ def main(


@app.command()
def run(node: str, name: str = None, meta_only: bool = False) -> None:
def run(
node: str, name: str = None, meta_only: bool = False, method: str = "run"
) -> None:
"""Execute a ZnTrack Node.
Use as 'zntrack run module.Node --name node_name'.
Arguments:
---------
node : str
The node to run.
name : str
The name of the node.
meta_only : bool
Save only the metadata.
method : str, default 'run'
The method to run on the node.
"""
env_file = pathlib.Path("env.yaml")
if env_file.exists():
Expand Down Expand Up @@ -80,7 +93,8 @@ def run(node: str, name: str = None, meta_only: bool = False) -> None:
node: Node = cls.from_rev(name=name, results=False)
node.save(meta_only=True)
if not meta_only:
node.run()
# dynamic version of node.run()
getattr(node, method)()
node.save(parameter=False)
else:
raise ValueError(f"Node {node} is not a ZnTrack Node.")
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8 changes: 7 additions & 1 deletion zntrack/core/node.py
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Expand Up @@ -443,7 +443,13 @@ def get_dvc_cmd(
cmd += ["--outs", f"{(get_nwd(node) /'node-meta.json').as_posix()}"]

module = module_handler(node.__class__)
cmd += [f"zntrack run {module}.{node.__class__.__name__} --name {node.name}"]

zntrack_run = f"zntrack run {module}.{node.__class__.__name__} --name {node.name}"
if hasattr(node, "_method"):
zntrack_run += f" --method {node._method}"

cmd += [zntrack_run]

optionals = [x for x in optionals if x] # remove empty entries []
return [cmd] + optionals

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4 changes: 4 additions & 0 deletions zntrack/examples/__init__.py
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Expand Up @@ -23,6 +23,10 @@ def run(self) -> None:
"""Save params to outs."""
self.outs = self.params

def join(self) -> None:
"""Join the results."""
self.outs = "-".join(self.params)


class ParamsToMetrics(zntrack.Node):
"""Save params to metrics."""
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5 changes: 4 additions & 1 deletion zntrack/project/zntrack_project.py
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Expand Up @@ -287,7 +287,10 @@ def run(
# update connectors
log.info(f"Running node {node}")
self.graph._update_node_attributes(node, UpdateConnectors())
node.run()
if hasattr(node, "_method"):
getattr(node, node._method)()
else:
node.run()
if save:
node.save()
node.state.loaded = True
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23 changes: 23 additions & 0 deletions zntrack/utils/apply.py
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@@ -0,0 +1,23 @@
"""Zntrack apply module for custom "run" methods."""

import typing as t

o = t.TypeVar("o")


def apply(obj: o, method: str) -> o:
"""Return a new object like "o" which has the method string attached."""

class MockInheritanceClass(obj):
"""Copy of the original class with the new method attribute.
We can not set the method directly on the original class, because
it would be used by all the other instances of the class as well.
"""

_method = method

MockInheritanceClass.__module__ = obj.__module__
MockInheritanceClass.__name__ = obj.__name__

return MockInheritanceClass

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