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Add anvi'o #13

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Juke34
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@Juke34 Juke34 commented Nov 22, 2024

Add anvi'o and change to alphabetical order for the section

@colindaven
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Hi,

thanks for this contribution.

At the moment the list is restricted to eukaryotic pangenomes. Do you think we need to loosen this restriction up a bit? It was conceived that way since most/all? prokaryotic pangenome software is substantially different in terms of resource requirements.

If we do include prokaryotic tools, then these should be in a different subsection because AFAIK they will never work with eukaryotic scale data. Then we'd need to add other tools like roary etc.

What do you think ?

@Juke34
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Juke34 commented Nov 23, 2024

My bad I didn't pay attention that the list focused only on eukaryote.

Yes, I think tools focused on prokaryotes would be useful as well. As you suggest, having a dedicated section would be a good approach to having everything in one place.

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