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scanpy.nix
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{ buildPythonPackage
, fetchPypi
, setuptools-scm
, packaging
, anndata
, matplotlib
, pandas
, seaborn
, h5py
, tqdm
, scikit-learn
, statsmodels
, patsy
, networkx
, natsort
, joblib
, numba
, umap-learn
, session-info
, scikit-misc # used by `scanpy.pp.highly_variable_genes()`
, leidenalg # used by `scanpy.tl.leiden()`
}:
buildPythonPackage rec {
pname = "scanpy";
version = "1.9.3";
format = "flit";
src = fetchPypi {
inherit pname version;
sha256 = "3+Zfms2fTBdAB5oJn4n6akS28O917K+FJHrUr4WRRNc=";
};
propagatedBuildInputs = [
# Add any necessary dependencies here
anndata
matplotlib
pandas
seaborn
h5py
tqdm
scikit-learn
statsmodels
patsy
networkx
natsort
joblib
numba
umap-learn
session-info
scikit-misc
leidenalg
];
nativeBuildInputs = [
setuptools-scm
];
}