Conflicting dependencies (Apple Silicon M1 hardware Monterey 12.0.1)

[htrivino20]

Machine: MacBook Pro M1 2020
OS: macOS Monterey 12.0.1
Python version of venv: Python 3.8.12
Pip version: 21.3.1
I have installed Tensorflow using this guide.

When I execute pip install antspynet I get the following error:

Collecting antspynet
Using cached antspynet-0.1.3-py3-none-any.whl (151 kB)

Collecting tensorflow-probability
Using cached tensorflow_probability-0.15.0-py2.py3-none-any.whl (5.7 MB)

Collecting antspyx
Using cached antspyx-0.2.9.tar.gz (305.4 MB)
Preparing metadata (setup.py) ... done
Requirement already satisfied: statsmodels in /Users/htrivino/miniforge3/lib/python3.8/site-packages (from antspynet) (0.12.1)
Requirement already satisfied: requests in /Users/htrivino/miniforge3/lib/python3.8/site-packages (from antspynet) (2.26.0)
Requirement already satisfied: scikit-learn in /Users/htrivino/miniforge3/lib/python3.8/site-packages (from antspynet) (1.0.1)

Collecting antspynet
Using cached antspynet-0.1.2-py3-none-any.whl (143 kB)
Using cached antspynet-0.1.1-py3-none-any.whl (140 kB)
ERROR: Cannot install antspynet==0.1.1, antspynet==0.1.2 and antspynet==0.1.3 because these package versions have conflicting dependencies.

The conflict is caused by:
antspynet 0.1.3 depends on tensorflow
antspynet 0.1.2 depends on tensorflow
antspynet 0.1.1 depends on tensorflow

To fix this you could try to:
1. loosen the range of package versions you've specified
2. remove package versions to allow pip attempt to solve the dependency conflict

ERROR: ResolutionImpossible: for help visit https://pip.pypa.io/en/latest/user_guide/#fixing-conflicting-dependencies

This is the conda list of the environment.

# packages in environment at /Users/htrivino/miniforge3:
#
# Name                    Version                   Build  Channel
absl-py                   0.10.0             pyhd8ed1ab_1    conda-forge
aiohttp                   3.7.4.post0      py38hea4295b_1    conda-forge
ants                      0.0.7                    pypi_0    pypi
appnope                   0.1.2            py38h10201cd_2    conda-forge
argon2-cffi               21.1.0           py38hea4295b_2    conda-forge
asgiref                   3.4.1                    pypi_0    pypi
astor                     0.8.1              pyh9f0ad1d_0    conda-forge
astunparse                1.6.3              pyhd8ed1ab_0    conda-forge
async-timeout             3.0.1                   py_1000    conda-forge
async_generator           1.10                       py_0    conda-forge
attrs                     21.2.0             pyhd8ed1ab_0    conda-forge
backcall                  0.2.0              pyh9f0ad1d_0    conda-forge
backports                 1.0                        py_2    conda-forge
backports.functools_lru_cache 1.6.4              pyhd8ed1ab_0    conda-forge
bleach                    4.1.0              pyhd8ed1ab_0    conda-forge
blinker                   1.4                        py_1    conda-forge
bokeh                     2.3.3            py38h10201cd_0    conda-forge
brotlipy                  0.7.0           py38hea4295b_1003    conda-forge
c-ares                    1.18.1               h3422bc3_0    conda-forge
ca-certificates           2021.10.8            h4653dfc_0    conda-forge
cached-property           1.5.2                hd8ed1ab_1    conda-forge
cached_property           1.5.2              pyha770c72_1    conda-forge
cachetools                4.2.4              pyhd8ed1ab_0    conda-forge
certifi                   2021.10.8        py38h10201cd_1    conda-forge
cffi                      1.15.0           py38hc67bbb8_0    conda-forge
chardet                   4.0.0            py38h10201cd_2    conda-forge
charset-normalizer        2.0.0              pyhd8ed1ab_0    conda-forge
clang                     5.0                      pypi_0    pypi
click                     8.0.3            py38h10201cd_1    conda-forge
cloudpickle               2.0.0              pyhd8ed1ab_0    conda-forge
colorama                  0.4.4              pyh9f0ad1d_0    conda-forge
conda                     4.10.3           py38h10201cd_3    conda-forge
conda-package-handling    1.7.3            py38hea4295b_1    conda-forge
cryptography              35.0.0           py38h10d4710_2    conda-forge
cycler                    0.11.0             pyhd8ed1ab_0    conda-forge
cytoolz                   0.11.2           py38hea4295b_1    conda-forge
dask                      2021.11.1          pyhd8ed1ab_0    conda-forge
dask-core                 2021.11.1          pyhd8ed1ab_0    conda-forge
dataclasses               0.8                pyhc8e2a94_3    conda-forge
decorator                 5.1.0              pyhd8ed1ab_0    conda-forge
defusedxml                0.7.1              pyhd8ed1ab_0    conda-forge
distributed               2021.11.1        py38h10201cd_0    conda-forge
django                    3.2.9                    pypi_0    pypi
entrypoints               0.3             pyhd8ed1ab_1003    conda-forge
flatbuffers               1.12                     pypi_0    pypi
freetype                  2.10.4               h17b34a0_1    conda-forge
fsspec                    2021.11.0          pyhd8ed1ab_0    conda-forge
gast                      0.4.0              pyh9f0ad1d_0    conda-forge
gevent                    21.8.0                   pypi_0    pypi
google-auth               1.35.0             pyh6c4a22f_0    conda-forge
google-auth-oauthlib      0.4.6              pyhd8ed1ab_0    conda-forge
google-pasta              0.2.0              pyh8c360ce_0    conda-forge
greenlet                  1.1.2                    pypi_0    pypi
grpcio                    1.41.1           py38h69ee544_1    conda-forge
h5py                      3.1.0           nompi_py38h032b01a_100    conda-forge
hdf5                      1.10.6          nompi_h0fc092c_1114    conda-forge
heapdict                  1.0.1                      py_0    conda-forge
idna                      3.1                pyhd3deb0d_0    conda-forge
importlib-metadata        4.8.2            py38h10201cd_0    conda-forge
importlib_resources       5.4.0              pyhd8ed1ab_0    conda-forge
ipykernel                 5.5.5            py38h2cb4d76_0    conda-forge
ipython                   7.29.0           py38h2cb4d76_1    conda-forge
ipython_genutils          0.2.0                      py_1    conda-forge
ipywidgets                7.6.5              pyhd8ed1ab_0    conda-forge
jbig                      2.1               h3422bc3_2003    conda-forge
jedi                      0.18.0           py38h10201cd_3    conda-forge
jinja2                    3.0.3              pyhd8ed1ab_0    conda-forge
joblib                    1.1.0              pyhd8ed1ab_0    conda-forge
jpeg                      9d                   h27ca646_0    conda-forge
jsonschema                4.2.1              pyhd8ed1ab_0    conda-forge
jupyter                   1.0.0            py38h10201cd_6    conda-forge
jupyter_client            7.0.6              pyhd8ed1ab_0    conda-forge
jupyter_console           6.4.0              pyhd8ed1ab_0    conda-forge
jupyter_core              4.9.1            py38h10201cd_0    conda-forge
jupyterlab_pygments       0.1.2              pyh9f0ad1d_0    conda-forge
jupyterlab_widgets        1.0.2              pyhd8ed1ab_0    conda-forge
keras                     2.6.0              pyhd8ed1ab_0    conda-forge
keras-preprocessing       1.1.2              pyhd8ed1ab_0    conda-forge
kiwisolver                1.3.2            py38h1670459_1    conda-forge
krb5                      1.19.2               hd92b7a7_3    conda-forge
lcms2                     2.12                 had6a04f_0    conda-forge
lerc                      3.0                  hbdafb3b_0    conda-forge
libblas                   3.9.0           12_osxarm64_openblas    conda-forge
libcblas                  3.9.0           12_osxarm64_openblas    conda-forge
libclang                  11.1.0          default_h0fdd720_1    conda-forge
libcurl                   7.80.0               h8fe1914_0    conda-forge
libcxx                    12.0.1               h168391b_0    conda-forge
libdeflate                1.8                  h3422bc3_0    conda-forge
libedit                   3.1.20191231         hc8eb9b7_2    conda-forge
libev                     4.33                 h642e427_1    conda-forge
libffi                    3.4.2                h3422bc3_5    conda-forge
libgfortran               5.0.0.dev0      11_0_1_hf114ba7_23    conda-forge
libgfortran5              11.0.1.dev0         hf114ba7_23    conda-forge
liblapack                 3.9.0           12_osxarm64_openblas    conda-forge
libllvm11                 11.1.0               h93073aa_2    conda-forge
libnghttp2                1.43.0               he4cd7f6_1    conda-forge
libopenblas               0.3.18          openmp_h5dd58f0_0    conda-forge
libpng                    1.6.37               hf7e6567_2    conda-forge
libprotobuf               3.19.1               hccf11d3_0    conda-forge
libsodium                 1.0.18               h27ca646_1    conda-forge
libssh2                   1.10.0               hb80f160_2    conda-forge
libtiff                   4.3.0                h74060c4_2    conda-forge
libwebp-base              1.2.1                h3422bc3_0    conda-forge
libzlib                   1.2.11            hee7b306_1013    conda-forge
llvm-openmp               12.0.1               hf3c4609_1    conda-forge
locket                    0.2.0                      py_2    conda-forge
lz4-c                     1.9.3                hbdafb3b_1    conda-forge
markdown                  3.3.4              pyhd8ed1ab_0    conda-forge
markupsafe                2.0.1            py38hea4295b_1    conda-forge
matplotlib-base           3.4.3            py38hb140015_1    conda-forge
matplotlib-inline         0.1.3              pyhd8ed1ab_0    conda-forge
mistune                   0.8.4           py38hea4295b_1005    conda-forge
msgpack-python            1.0.2            py38h1670459_2    conda-forge
multidict                 5.2.0            py38hea4295b_1    conda-forge
nb_conda_kernels          2.3.1            py38h10201cd_0    conda-forge
nbclient                  0.5.5              pyhd8ed1ab_0    conda-forge
nbconvert                 6.2.0            py38h10201cd_0    conda-forge
nbformat                  5.1.3              pyhd8ed1ab_0    conda-forge
ncurses                   6.2                  h9aa5885_4    conda-forge
nest-asyncio              1.5.1              pyhd8ed1ab_0    conda-forge
notebook                  6.4.5              pyha770c72_0    conda-forge
numpy                     1.19.5           py38hbf7bb01_2    conda-forge
oauthlib                  3.1.1              pyhd8ed1ab_0    conda-forge
olefile                   0.46               pyh9f0ad1d_1    conda-forge
openjpeg                  2.4.0                h062765e_1    conda-forge
openssl                   1.1.1l               h3422bc3_0    conda-forge
opt_einsum                3.3.0              pyhd8ed1ab_1    conda-forge
packaging                 21.0               pyhd8ed1ab_0    conda-forge
pandas                    1.3.4            py38h3777fb4_1    conda-forge
pandocfilters             1.5.0              pyhd8ed1ab_0    conda-forge
parso                     0.8.2              pyhd8ed1ab_0    conda-forge
partd                     1.2.0              pyhd8ed1ab_0    conda-forge
patsy                     0.5.2              pyhd8ed1ab_0    conda-forge
pexpect                   4.8.0              pyh9f0ad1d_2    conda-forge
pickleshare               0.7.5                   py_1003    conda-forge
pillow                    8.4.0            py38h02acf36_0    conda-forge
pip                       21.3.1                   pypi_0    pypi
plotly                    5.3.1              pyhd8ed1ab_0    conda-forge
prometheus_client         0.12.0             pyhd8ed1ab_0    conda-forge
prompt-toolkit            3.0.22             pyha770c72_0    conda-forge
prompt_toolkit            3.0.22               hd8ed1ab_0    conda-forge
protobuf                  3.19.1           py38h6f2b01f_1    conda-forge
psutil                    5.8.0            py38hea4295b_2    conda-forge
ptyprocess                0.7.0              pyhd3deb0d_0    conda-forge
pyasn1                    0.4.8                      py_0    conda-forge
pyasn1-modules            0.2.7                      py_0    conda-forge
pycosat                   0.6.3           py38hea4295b_1009    conda-forge
pycparser                 2.21               pyhd8ed1ab_0    conda-forge
pygments                  2.10.0             pyhd8ed1ab_0    conda-forge
pyjwt                     2.3.0              pyhd8ed1ab_0    conda-forge
pyopenssl                 21.0.0             pyhd8ed1ab_0    conda-forge
pyparsing                 3.0.5              pyhd8ed1ab_0    conda-forge
pyrsistent                0.18.0           py38hea4295b_0    conda-forge
pysocks                   1.7.1            py38h10201cd_4    conda-forge
python                    3.8.12          hab31e5c_2_cpython    conda-forge
python-dateutil           2.8.2              pyhd8ed1ab_0    conda-forge
python_abi                3.8                      2_cp38    conda-forge
pytz                      2021.3             pyhd8ed1ab_0    conda-forge
pyu2f                     0.1.5              pyhd8ed1ab_0    conda-forge
pyyaml                    6.0              py38hea4295b_3    conda-forge
pyzmq                     22.3.0           py38h51b17a6_1    conda-forge
readline                  8.1                  hedafd6a_0    conda-forge
requests                  2.26.0             pyhd8ed1ab_0    conda-forge
requests-oauthlib         1.3.0              pyh9f0ad1d_0    conda-forge
rsa                       4.7.2              pyh44b312d_0    conda-forge
ruamel_yaml               0.15.80         py38hea4295b_1006    conda-forge
scikit-learn              1.0.1            py38hfeda2c9_1    conda-forge
scipy                     1.7.2            py38hd0c9ec0_0    conda-forge
seaborn                   0.11.2               hd8ed1ab_0    conda-forge
seaborn-base              0.11.2             pyhd8ed1ab_0    conda-forge
send2trash                1.8.0              pyhd8ed1ab_0    conda-forge
setuptools                58.5.3           py38h10201cd_0    conda-forge
six                       1.15.0             pyh9f0ad1d_0    conda-forge
sortedcontainers          2.4.0              pyhd8ed1ab_0    conda-forge
sqlite                    3.36.0               h72a2b83_2    conda-forge
sqlparse                  0.4.2                    pypi_0    pypi
statsmodels               0.12.1           py38h8369297_2    conda-forge
tblib                     1.7.0              pyhd8ed1ab_0    conda-forge
tenacity                  8.0.1              pyhd8ed1ab_0    conda-forge
tensorboard               2.6.0              pyhd8ed1ab_1    conda-forge
tensorboard-data-server   0.6.0            py38h10d4710_1    conda-forge
tensorboard-plugin-wit    1.8.0              pyh44b312d_0    conda-forge
tensorflow-deps           2.6.0                         0    apple
tensorflow-estimator      2.6.0            py38hddd8853_0    conda-forge
tensorflow-macos          2.6.0                    pypi_0    pypi
tensorflow-metal          0.2.0                    pypi_0    pypi
termcolor                 1.1.0                      py_2    conda-forge
terminado                 0.12.1           py38h10201cd_1    conda-forge
testpath                  0.5.0              pyhd8ed1ab_0    conda-forge
threadpoolctl             3.0.0              pyh8a188c0_0    conda-forge
tk                        8.6.11               he1e0b03_1    conda-forge
toolz                     0.11.2             pyhd8ed1ab_0    conda-forge
tornado                   6.1              py38hea4295b_2    conda-forge
tqdm                      4.62.3             pyhd8ed1ab_0    conda-forge
traitlets                 5.1.1              pyhd8ed1ab_0    conda-forge
tsfresh                   0.17.0                     py_0    conda-forge
typeguard                 2.13.0             pyhd8ed1ab_0    conda-forge
typing-extensions         3.7.4.3                       0    conda-forge
typing_extensions         3.7.4.3                    py_0    conda-forge
tzdata                    2021e                he74cb21_0    conda-forge
urllib3                   1.26.7             pyhd8ed1ab_0    conda-forge
wcwidth                   0.2.5              pyh9f0ad1d_2    conda-forge
webencodings              0.5.1                      py_1    conda-forge
werkzeug                  2.0.1              pyhd8ed1ab_0    conda-forge
wheel                     0.35.1             pyh9f0ad1d_0    conda-forge
widgetsnbextension        3.5.2            py38h10201cd_0    conda-forge
wrapt                     1.12.1           py38hea4295b_3    conda-forge
xz                        5.2.5                h642e427_1    conda-forge
yaml                      0.2.5                h642e427_0    conda-forge
yarl                      1.7.2            py38hea4295b_1    conda-forge
zeromq                    4.3.4                hbdafb3b_1    conda-forge
zict                      2.0.0                      py_0    conda-forge
zipp                      3.6.0              pyhd8ed1ab_0    conda-forge
zlib                      1.2.11            hee7b306_1013    conda-forge
zope-event                4.5.0                    pypi_0    pypi
zope-interface            5.4.0                    pypi_0    pypi
zstd                      1.5.0                h861e0a7_0    conda-forge

[ntustison]

I don't explicitly install via pip (instead python setup.py install). I just tried it with a newly installed Monterey OSX (not the M1 hardware, though) and didn't have issues. I'm guessing not many, if any, users have the M1 hardware currently.

[ghost]

Hey, I see you installed tensorflow on max os 12. I am trying to do the same, using the guide you mention, but i always get
ERROR: tensorflow_macos-0.1a3-cp38-cp38-macosx_11_0_arm64.whl is not a supported wheel on this platform.
as the output. What should I do? I checked all the prerequisites and the sanity checks.

My machine is a macbook pro 2020 M1

[htrivino20]

Hey, I see you installed tensorflow on max os 12. I am trying to do the same, using the guide you mention, but i always get ERROR: tensorflow_macos-0.1a3-cp38-cp38-macosx_11_0_arm64.whl is not a supported wheel on this platform. as the output. What should I do? I checked all the prerequisites and the sanity checks.

My machine is a macbook pro 2020 M1

I had the same issue,  pip install tensorflow-macos worked upgrading pip pip install --upgrade pip. More info

[isaacdonis]

For others, upgrading pip and following this guide helped me resolve my issue on my 2021 MacBook Pro.

[ntustison]

Awesome. Thanks for posting.

[ntustison]

As a follow-up, finally got the M1 and was able to get both ANTsPyNet and ANTsRNet up and running without too much difficulty. Thanks for pointing to the link above.