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megagraphcode

Project Instructions

Steps

  1. Log GSM Codes

    • Use gsmwriter.py to record the utilized GSM codes, categorizing each code as either "control" or "notcontrol."

  2. Format Data in CSV

    • Manually enter the GSM codes and their groups into Grouped_line_plotImport.csv.
    • If any formatting issues arise, perform manual debugging or corrections as needed.
    • Follow the formatting example provided in the CSV file.

  3. Run Data Extraction Script

    • Run extractor.py, which will generate the necessary R code for the graph and output it in generated_r_code.R.

  4. Create the Graph

    • Copy the R code from generated_r_code.R and paste it into Grouped_Line_GraphCode.R.
    • Execute the code to create the grouped line graph.