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add automated choice of which posterior to use for species list #46

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AdityaSavara opened this issue Feb 21, 2020 · 1 comment
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@AdityaSavara
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species_list =['a','b','c']
species_kinetic_role =['reactant', 'intermediate', 'product']
kinetic_experiment_type = 'transient'
This example would use concentration, rate, concentration for the posterior.
If it is steady state, then it would be concentration for all of them.
For transient, need the uncertainties of initial concentrations for each of them.

@AdityaSavara AdityaSavara added enhancement New feature or request help wanted Extra attention is needed good first issue Good for newcomers and removed good first issue Good for newcomers help wanted Extra attention is needed labels Feb 21, 2020
@AdityaSavara
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This is now in the code, but the way I made it was like this:

UserInput.model['kinetics_type'] = 'transient'
UserInput.responses['response_types']=['P'] 
UserInput.responses['response_data_type']=['r']

This feature still needs to be documented so others can use it.

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