This Repo is being slowly archived in favour of Ant_Tracking. The code in here will only be updated if it is not yet present in the new Repo. Please make sure you only use the newest version of any script
Lasius niger Group Size Effects Experiment 🐜 🦠
Testing Social Immunity role in disease hindering dynamics in societies, using ant colonies interaction networks and behaviour | experimental epidemiology
R scripts for:
- Tracking Data Post-processing
- Geometrical capsules assignment
- Interactions detection
- Machine Learning Behavioural Classification
- Personal immunity investment and pathogen load quantification
- RTqPCR data pre-processing pipeline with MNAR data simulations
- extra related material
Code written by Adriano Wanderlingh, Nathalie Stroeymeyt and Tom Richardson with contributions by Enrico Gavagnign
Ant Epidemiology Lab