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out2Log.final.out.txt
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out2Log.final.out.txt
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Started job on | Sep 15 14:45:55
Started mapping on | Sep 15 14:46:49
Finished on | Sep 15 15:43:05
Mapping speed, Million of reads per hour | 21.98
Number of input reads | 20614168
Average input read length | 302
UNIQUE READS:
Uniquely mapped reads number | 15511225
Uniquely mapped reads % | 75.25%
Average mapped length | 294.02
Number of splices: Total | 13008853
Number of splices: Annotated (sjdb) | 12811444
Number of splices: GT/AG | 12576998
Number of splices: GC/AG | 236781
Number of splices: AT/AC | 4481
Number of splices: Non-canonical | 190593
Mismatch rate per base, % | 1.64%
Deletion rate per base | 0.13%
Deletion average length | 4.19
Insertion rate per base | 0.09%
Insertion average length | 3.42
MULTI-MAPPING READS:
Number of reads mapped to multiple loci | 1279170
% of reads mapped to multiple loci | 6.21%
Number of reads mapped to too many loci | 227119
% of reads mapped to too many loci | 1.10%
UNMAPPED READS:
% of reads unmapped: too many mismatches | 0.00%
% of reads unmapped: too short | 17.05%
% of reads unmapped: other | 0.39%
CHIMERIC READS:
Number of chimeric reads | 0
% of chimeric reads | 0.00%