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add cluster submission to usage
Build manual pages and deploy documentation #27: Commit c4fdba0 pushed by AroneyS
November 11, 2024 23:49 1m 32s master
November 11, 2024 23:49 1m 32s
add cluster submission to usage
Test Bin Chicken with Setup-Miniconda From Marketplace #344: Commit 2e253a4 pushed by AroneyS
November 11, 2024 23:08 12m 4s update-docs2
November 11, 2024 23:08 12m 4s
add usage doc
Test Bin Chicken with Setup-Miniconda From Marketplace #343: Commit 7ad8a9d pushed by AroneyS
November 11, 2024 23:05 12m 12s update-docs2
November 11, 2024 23:05 12m 12s
fix ambiguous sample name
Test Bin Chicken with Setup-Miniconda From Marketplace #342: Commit 03ec70a pushed by AroneyS
November 11, 2024 22:35 12m 16s update-docs2
November 11, 2024 22:35 12m 16s
update python version in workflows
Test Bin Chicken with Setup-Miniconda From Marketplace #341: Commit 291a655 pushed by AroneyS
November 7, 2024 01:56 1m 41s update-snakemake
November 7, 2024 01:56 1m 41s
update python
Test Bin Chicken with Setup-Miniconda From Marketplace #340: Commit 9a5477a pushed by AroneyS
November 7, 2024 01:16 3m 21s update-snakemake
November 7, 2024 01:16 3m 21s
initial change
Test Bin Chicken with Setup-Miniconda From Marketplace #339: Commit 911de7f pushed by AroneyS
November 7, 2024 01:10 5m 10s update-snakemake
November 7, 2024 01:10 5m 10s
run no genomes in lazy mode
Test Bin Chicken with Setup-Miniconda From Marketplace #338: Commit 823bd13 pushed by AroneyS
October 25, 2024 04:34 12m 0s master
October 25, 2024 04:34 12m 0s
run no genomes in lazy mode
Test Bin Chicken with Setup-Miniconda From Marketplace #337: Commit 4bc5563 pushed by AroneyS
October 25, 2024 04:08 12m 22s no-genomes-lazy
October 25, 2024 04:08 12m 22s
add precluster_distance to standard args
Test Bin Chicken with Setup-Miniconda From Marketplace #336: Commit bf990b4 pushed by AroneyS
October 25, 2024 01:29 12m 24s master
October 25, 2024 01:29 12m 24s
add precluster_distance to standard args
Test Bin Chicken with Setup-Miniconda From Marketplace #335: Commit 9485cd9 pushed by AroneyS
October 25, 2024 01:08 12m 8s add-sketches-input
October 25, 2024 01:08 12m 8s
add precluster-distances argument
Test Bin Chicken with Setup-Miniconda From Marketplace #334: Commit 2b39294 pushed by AroneyS
October 25, 2024 00:02 5m 3s add-sketches-input
October 25, 2024 00:02 5m 3s
initial change
Test Bin Chicken with Setup-Miniconda From Marketplace #333: Commit 98cced7 pushed by AroneyS
October 24, 2024 23:06 6m 2s update-snakemake
October 24, 2024 23:06 6m 2s
use abspath for prior coassemblies
Test Bin Chicken with Setup-Miniconda From Marketplace #332: Commit 4a4cf0f pushed by AroneyS
October 11, 2024 03:45 12m 53s master
October 11, 2024 03:45 12m 53s
change prior header to be consistent for single and update
Test Bin Chicken with Setup-Miniconda From Marketplace #331: Commit fbcf8e6 pushed by AroneyS
October 10, 2024 22:53 12m 11s master
October 10, 2024 22:53 12m 11s
change prior header to be consistent for single and update
Test Bin Chicken with Setup-Miniconda From Marketplace #330: Commit 439c283 pushed by AroneyS
October 10, 2024 22:23 12m 8s fix-prior-header
October 10, 2024 22:23 12m 8s
move prior_assemblies processing to function
Test Bin Chicken with Setup-Miniconda From Marketplace #329: Commit 5675724 pushed by AroneyS
October 10, 2024 05:44 11m 59s master
October 10, 2024 05:44 11m 59s
Merge branch 'master' into allow-provided-assemblies
Test Bin Chicken with Setup-Miniconda From Marketplace #328: Commit e013bb7 pushed by AroneyS
October 10, 2024 05:29 12m 28s allow-provided-assemblies
October 10, 2024 05:29 12m 28s
move prior_assemblies processing to function
Test Bin Chicken with Setup-Miniconda From Marketplace #327: Commit ebb50b5 pushed by AroneyS
October 10, 2024 05:29 12m 22s allow-provided-assemblies
October 10, 2024 05:29 12m 22s
add support for prior assemblies to update
Test Bin Chicken with Setup-Miniconda From Marketplace #326: Commit 8816e39 pushed by AroneyS
October 10, 2024 05:07 12m 19s allow-provided-assemblies
October 10, 2024 05:07 12m 19s
rework prior coassembly within snakemake
Test Bin Chicken with Setup-Miniconda From Marketplace #325: Commit 2a6bf2c pushed by AroneyS
October 10, 2024 03:12 13m 3s allow-provided-assemblies
October 10, 2024 03:12 13m 3s
fix suffixes not being removed in preclusters
Test Bin Chicken with Setup-Miniconda From Marketplace #324: Commit 46e34c2 pushed by AroneyS
October 2, 2024 01:22 12m 36s master
October 2, 2024 01:22 12m 36s
fix suffixes not being removed in preclusters
Test Bin Chicken with Setup-Miniconda From Marketplace #323: Commit bb28ce5 pushed by AroneyS
October 2, 2024 00:50 11m 53s fix-precluster-suffixes
October 2, 2024 00:50 11m 53s
switch to miniforge
Test Bin Chicken with Setup-Miniconda From Marketplace #322: Commit f6aa5d3 pushed by AroneyS
October 2, 2024 00:12 12m 4s master
October 2, 2024 00:12 12m 4s
switch to miniforge
Test Bin Chicken with Setup-Miniconda From Marketplace #321: Commit 35cff0c pushed by AroneyS
October 1, 2024 23:54 11m 56s fix-memory-issue
October 1, 2024 23:54 11m 56s