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requirements.txt
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requirements.txt
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# nanovar-v1.6.0, python3.11 (pip list --format=freeze)
absl-py==2.0.0
astunparse==1.6.3
beautifulsoup4==4.12.2
biopython==1.83
cached-property==1.5.2
cachetools==5.3.2
certifi==2023.11.17
charset-normalizer==3.3.2
click==8.1.7
cloudpickle==3.0.0
contourpy==1.2.0
cycler==0.12.1
dask==2024.1.0
flatbuffers==23.5.26
fonttools==4.47.2
fsspec==2023.12.2
gast==0.5.4
google-auth==2.26.2
google-auth-oauthlib==1.2.0
google-pasta==0.2.0
grpcio==1.60.0
h5py==3.10.0
HTMLArk==1.0.0
idna==3.6
importlib-metadata==7.0.1
keras==2.15.0
kiwisolver==1.4.5
libclang==16.0.6
locket==1.0.0
Markdown==3.5.2
MarkupSafe==2.1.3
matplotlib==3.8.2
ml-dtypes==0.2.0
NanoINSight==0.0.1
nanovar==1.6.0
natsort==8.4.0
numpy==1.26.3
oauthlib==3.2.2
opt-einsum==3.3.0
packaging==23.2
pandas==2.1.4
partd==1.4.1
pillow==10.2.0
pip==23.3.2
progress==1.6
protobuf==4.23.4
pyasn1==0.5.1
pyasn1-modules==0.3.0
pybedtools==0.9.1
pyparsing==3.1.1
pysam==0.22.0
python-dateutil==2.8.2
pytz==2023.3.post1
PyYAML==6.0.1
requests==2.31.0
requests-oauthlib==1.3.1
rsa==4.9
scikit-allel==1.3.7
scipy==1.11.4
setuptools==69.0.3
six==1.16.0
soupsieve==2.5
tensorboard==2.15.1
tensorboard-data-server==0.7.2
tensorflow-cpu==2.15.0.post1
tensorflow-estimator==2.15.0
tensorflow-io-gcs-filesystem==0.35.0
termcolor==2.4.0
toolz==0.12.0
typing_extensions==4.9.0
tzdata==2023.4
urllib3==2.1.0
Werkzeug==3.0.1
wheel==0.42.0
wrapt==1.14.1
zipp==3.17.0