yersinia_enterocolitica.config

#reference_file (fasta file full path)
/home/mpmachado/INNUca/modules/trueCoverage_rematch/yersinia_enterocolitica.fasta
#length_extra_seq (int)
100
#maximum_number_absent_genes (int)
1
#maximum_number_genes_multiple_alleles (int)
1
#minimum_read_coverage (x, int)
25
#minimum_depth_presence (x, int)
5
#minimum_depth_call (x, int)
10
#minimum_depth_frequency_dominant_allele (0-1, double)
0.60
#minimum_gene_coverage (0-100, int)
80
#minimum_gene_identity (0-100, int)
70