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It is a good practice to validate the objects using a validity method (setValidity for S4 classes).
In topAnat.R we extend from topGOdata class but do not perform such a validity check. As far as I can tell, topGO doesn;t do it either... (see the AllClasses.R files in their package).
A good point (more elegant) is that it could replace/gather some checks that are now made in the beginning of the topAnat function...
The text was updated successfully, but these errors were encountered:
It is a good practice to validate the objects using a validity method (
setValidity
for S4 classes).In
topAnat.R
we extend fromtopGOdata
class but do not perform such a validity check. As far as I can tell,topGO
doesn;t do it either... (see theAllClasses.R
files in their package).A good point (more elegant) is that it could replace/gather some checks that are now made in the beginning of the
topAnat
function...The text was updated successfully, but these errors were encountered: