New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Prototype alignment of single-cell data with HCA metadata #1

Open

eweitz opened this issue May 14, 2018 · 0 comments

Member

eweitz commented May 14, 2018

The Human Cell Atlas (HCA) community has developed standards for single cell metadata. Single Cell Portal provides public single cell RNA-seq data.

Let's try to prototype a better alignment of the single cell RNA-seq data with those HCA metadata standards.

Data:
https://portals.broadinstitute.org/single_cell/study/-single-nucleus-rna-seq-of-cell-diversity-in-the-adult-mouse-hippocampus-snuc-seq

Metadata:
https://github.com/HumanCellAtlas/metadata-schema

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment