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The napari-lattice plugin has the option for batch processing within the terminal. Considering the addition of more functionalities, the number of arguments isgrowing. This can get confusing and require really long command lines which is not user-friendly. (not that running in the terminal makes it any easier 😝 )
Instead, use a yaml config file.
Syntax should be:
I've cretaed a branch that allows an optional --config yml file, but still works with the CLI if preferred. Also should set defaults if parameters are missing in config file.
The napari-lattice plugin has the option for batch processing within the terminal. Considering the addition of more functionalities, the number of arguments isgrowing. This can get confusing and require really long command lines which is not user-friendly. (not that running in the terminal makes it any easier 😝 )
Instead, use a yaml config file.
Syntax should be:
napari-lattice --config "location-of-config-file"
Arguments: https://github.com/BioimageAnalysisCoreWEHI/napari_lattice/wiki/6.-Batch-Processing
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