- Follow the order of examples to understand the library's usage.
- Interactive python notebook files are provided in each example directory.
- The mechanisms directory is containing the mod files required for the examples, its compilation instructions is provided in the first tutorial.
File Name | Description |
---|---|
singlecell.ipynb | Demonstration of single cell simulation capabilities |
sonata-network.ipynb | Simulating a group of cells from a multi polulation SONATA circuit |
bpap.ipynb | Simulating back propagating action potential in a dendritic tree |
epsp.ipynb | Simulating excitatory post synaptic potential on a Hippocampal CA1 cell |
stimuli.ipynb | Exploring the stimuli available at BlueCelluLab |
stimuli-sequence.ipynb | Simulating a sequence of stimuli on a cell in parallel |
Multiple-protocols.ipynb | Simulating multiple protocols on a cell using previous examples |