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upgrade all python dockers #174

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kelly-sovacool opened this issue Nov 26, 2024 · 1 comment · Fixed by #176
Closed

upgrade all python dockers #174

kelly-sovacool opened this issue Nov 26, 2024 · 1 comment · Fixed by #176
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@kelly-sovacool
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kelly-sovacool commented Nov 26, 2024 •
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to avoid clashing python problems
e.g. CCBR/XAVIER#122
@kopardev kopardev added the RENEE RepoName label Nov 26, 2024
@kelly-sovacool kelly-sovacool changed the title upgrade multiqc docker upgrade all python dockers Nov 26, 2024
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Rules that fail: tin_merge, rnaseq_multiqc, rsem_merge

@kelly-sovacool kelly-sovacool mentioned this issue Nov 26, 2024
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fix: upgrade python-based docker containers to use versions with PYTHONPATH unset CCBR/RENEE
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@kopardev @kelly-sovacool @samarth8392