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Create a test workflow cronjob #183

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kopardev opened this issue Dec 2, 2024 · 1 comment
Open

Create a test workflow cronjob #183

kopardev opened this issue Dec 2, 2024 · 1 comment
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@kopardev
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kopardev commented Dec 2, 2024

  • what test data to use --> /gpfs/gsfs10/users/CCBR_Pipeliner/testdata/rnaseq/old-demo-data
  • human data
  • run every week
  • save data for each month ... autodelete older files.
@kopardev kopardev self-assigned this Dec 2, 2024
@kopardev kopardev added the RENEE RepoName label Dec 2, 2024
@kelly-sovacool
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It would be great to launch two separate runs -- one with paired and one with single end data. There are a lot of if/else statements in the pipeline to control which rules are run depending on PE vs SE.

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