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process_import_anat.json
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process_import_anat.json
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{ "description":"", "anatomy_type":{ "description":"Select the type of anatomy to use. <<template>> Brainstorm default anatomy. <<individual>> HCP individual anatomy", "type":"default", "type_list":[ { "id":"default", "name":"default_anatomy", "description":"Select the Brainstorm anatomy template. See app/bst_default_anatomy.json file and select all params from there", "template_name":"ICBM152_2023b", "default_atlas":"Desikan-Killiany" },{ "id":"individual", "name":"hcp_anat_individual", "description":"HCP individual anatomy", "base_path":"/mnt/Store/OneDrive/Ariosdy/Tesis/Application/Data/ciftify", "T1w_file_name":"T1w.nii.gz", "Atlas_file_name":"aparc+aseg.nii.gz" },{ "id":"template", "name":"hcp_anat_template", "description":"HCP anatomy to use as template for EEG dataset", "base_path":"D:/Data/MIITRA/ciftify", "template_name":"MIITRA", "T1w_file_name":"T1w.nii.gz", "Atlas_file_name":"aparc.a2009s+aseg.nii.gz" } ] }, "common_params":{ "mri_transformation":{ "use_transformation":false, "base_path":"/mnt/Store/Data/Conectome/Sample", "file_name":"meg/SubID/MEG/anatomy/SubID_MEG_anatomy_transform.txt" }, "non_brain_surfaces":{ "description":"FSL Bet command output", "base_path":"/mnt/Store/OneDrive/Ariosdy/Tesis/Application/Data/fsl_bet" }, "layer_desc":{ "description":"Layer descriptor. Options <<white>> OR <<midthickness>> OR <<pial>> OR <<bigbrain>> multilayer like bigbrain OR <<fs_LR>> like HCP FSAve (three layers).", "desc":"Midthickness" }, "surfaces_resolution":{ "description":"Numbers of vertices for downsample the surfaces: default <<8000>>", "nvertices":8000 } }}