Add notebook tools

Author: cdancette

bootstrap/run.py

@@ -53,7 +53,7 @@ def init_logs_options_files(exp_dir, resume=None):
     Logger(exp_dir, name=logs_name)
 
 
-def run(path_opts=None):
+def run(path_opts=None, train_engine=True, eval_engine=True):
     # first call to Options() load the options yaml file from --path_opts command line argument if path_opts=None
     Options(path_opts)
 
@@ -106,19 +106,20 @@ def run(path_opts=None):
 
         # if no training split, evaluate the model on the evaluation split
         # (example: $ python main.py --dataset.train_split --dataset.eval_split test)
-        if not Options()['dataset']['train_split']:
+        if eval_engine and not Options()['dataset']['train_split']:
             engine.eval()
 
         # optimize the model on the training split for several epochs
         # (example: $ python main.py --dataset.train_split train)
         # if evaluation split, evaluate the model after each epochs
         # (example: $ python main.py --dataset.train_split train --dataset.eval_split val)
-        if Options()['dataset']['train_split']:
+        if train_engine and Options()['dataset']['train_split']:
             engine.train()
 
     finally:
         # write profiling results, if enabled
         process_profiler(profiler)
+        return engine
 
 
 def activate_debugger():

bootstrap/tools.py

@@ -0,0 +1,67 @@
+import os
+import sys
+import torch
+from bootstrap.lib.logger import Logger
+from bootstrap.lib.options import Options
+from bootstrap.run import run
+
+
+def reset_instance():
+    Options._Options__instance = None
+    Options.__instance = None
+    Logger._Loger_instance = None
+    Logger.perf_memory = {}
+    sys.argv = [sys.argv[0]]  # reset command line args
+
+
+def get_engine(
+    path_experiment, weights="best_eval_epoch.accuracy_top1", logs_name="tools",
+):
+    reset_instance()
+    path_yaml = os.path.join(path_experiment, "options.yaml")
+    opt = Options(path_yaml)
+    if weights is not None:
+        opt["exp.resume"] = weights
+    opt["exp.dir"] = path_experiment
+    opt["misc.logs_name"] = logs_name
+    engine = run(train_engine=False, eval_engine=False)
+    return engine
+
+
+def item_to_batch(engine, split, item, prepare_batch=True):
+    batch = engine.dataset[split].collate_fn([item])
+    if prepare_batch:
+        batch = engine.model.prepare_batch(batch)
+    return batch
+
+
+def apply_item(engine, item, split="eval"):
+    # item = engine.dataset[split][idx]
+    engine.model.eval()
+    batch = item_to_batch(engine, split, item)
+    with torch.no_grad():
+        out = engine.model.network(batch)
+    return out
+
+
+def load_model_state(engine, path):
+    """
+    engine: bootstran Engine
+    path: path to model weights
+    """
+    model_state = torch.load(path)
+    engine.model.load_state_dict(model_state)
+
+
+def load_epoch(
+    engine, epoch, exp_dir,
+):
+    path = os.path.join(exp_dir, f"ckpt_epoch_{epoch}_model.pth.tar")
+    print(path)
+    load_model_state(engine, path)
+
+
+def load_last(engine, exp_dir):
+    path = os.path.join(exp_dir, "ckpt_last_model.pth.tar")
+    load_model_state(engine, path)
+