NAMESPACE

# Generated by roxygen2: do not edit by hand

export(GEP_makeMean)
export(Norm_cleanPropRaw)
export(cn_HmClass)
export(cn_HmClass_disease)
export(cn_HmVars)
export(cn_apply)
export(cn_assessGRN)
export(cn_barplot_grnSing)
export(cn_classAssess)
export(cn_class_perf_hm_ordered)
export(cn_clr)
export(cn_compileGRNassessments)
export(cn_findSpecGenes)
export(cn_make_grn)
export(cn_make_processor)
export(cn_nis)
export(cn_nis_all)
export(cn_outputRes)
export(cn_remake_processor)
export(cn_s3_fetchFastq)
export(cn_salmon)
export(cn_setup)
export(cn_splitMakeAssess)
export(cn_tfScore)
export(cn_trainNorm)
export(cn_writeReadme)
export(downSampleW)
export(fastq_readLength)
export(fastq_trim)
export(fetchIndexHandler)
export(fetch_salmon_indices)
export(findVarGenes)
export(find_tfs)
export(mp_rainbowPlot)
export(multiplot)
export(ordered_class_perf_hm)
export(pdf_classification_hm)
export(pdf_grn_status)
export(pdf_grn_status_by_CT)
export(pdf_grn_status_by_dlevel)
export(pdf_nis_plots)
export(plot_class_PRs)
export(plot_nis)
export(plot_tsne)
export(processSRA)
export(randomize)
export(s3_get)
export(s3_listDir)
export(s3_put)
export(sc_compAlpha)
export(sc_compMu)
export(sc_statTab)
export(to_tsne)
export(trans_prop)
export(trans_rnaseq)
export(tsneMult)
export(utils_count_comments)
export(utils_loadObject)
export(utils_log)
export(utils_myDate)
export(utils_myDist)
export(utils_strip_fname)
export(utils_stripwhite)
export(utils_tarcompress_dir)
export(utils_unpack)
export(weighted_down)
import(ggplot2)
import(grid)
import(gridExtra)
import(igraph)
import(parallel)
import(pheatmap)
import(plyr)
import(randomForest)
import(reshape2)
import(tibble)
import(tidyr)
importFrom(AnnotationDbi,as.list)