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DESCRIPTION
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Package: LandSCENT
Title: Landscape Single Cell Entropy
Version: 0.99.5
Description: LandSCENT (Landscape Single Cell Entropy) is a R-package
for the analysis of single-cell RNA-Seq data. One important
feature of this package is the computation of signaling entropy,
which allows single cells to be ordered according to differentiation
potency. LandSCENT also integrates cell density with potency
distribution to dissect cell types across all potency states
and generates high-quality figures to show this.
Date: 2019-5-16
Author: Weiyan Chen, Andrew E Teschendorff
Maintainer: Weiyan Chen <chenweiyan1208@gmail.com>
Depends: R (>= 3.6)
Imports: cluster, corpcor, igraph, isva, mclust, parallel, stats,
grDevices, graphics, marray, scater, Biobase, BiocGenerics,
SummarizedExperiment, SingleCellExperiment, Rtsne, irlba,
plot3D, MASS, dbscan, monocle, DelayedArray, Matrix, destiny,
ggplot2, ggthemes, ccaPP, wordspace
Suggests: roxygen2, BiocStyle, knitr, rmarkdown, testthat
VignetteBuilder: knitr
License: GPL-3
LazyData: true
NeedsCompilation: no
RoxygenNote: 7.1.0
Encoding: UTF-8
URL: https://github.com/ChenWeiyan/LandSCENT
BugReports: https://github.com/ChenWeiyan/LandSCENT/issues
biocViews: SingleCell, SystemsBiology, Network, CellBiology,
GeneExpression, RNASeq, SingleCell, Software, Transcriptomics,
Visualization
git_url: https://github.com/ChenWeiyan/LandSCENT