NAMESPACE

# Generated by roxygen2: do not edit by hand

export(CCAT)
export(CompSRana)
export(DoDiffusionMap)
export(DoIntegPPI)
export(DoLandSCENT)
export(InferLandmark)
export(InferPotency)
export(Plot_CellSR)
export(Plot_DiffusionMap)
export(Plot_LandSR)
import(Biobase)
import(MASS)
import(Matrix)
import(Rtsne)
import(SingleCellExperiment)
import(cluster)
import(corpcor)
import(ggplot2)
import(irlba)
import(mclust)
import(monocle)
import(parallel)
import(plot3D)
import(scater)
import(wordspace)
importFrom(BiocGenerics,estimateSizeFactors)
importFrom(DelayedArray,isEmpty)
importFrom(Matrix,colSums)
importFrom(SummarizedExperiment,"colData<-")
importFrom(SummarizedExperiment,assay)
importFrom(SummarizedExperiment,colData)
importFrom(ccaPP,corPearson)
importFrom(cluster,pam)
importFrom(dbscan,dbscan)
importFrom(destiny,DPT)
importFrom(destiny,DiffusionMap)
importFrom(destiny,eigenvectors)
importFrom(destiny,plot)
importFrom(ggthemes,geom_rangeframe)
importFrom(grDevices,colorRampPalette)
importFrom(grDevices,dev.off)
importFrom(grDevices,pdf)
importFrom(graphics,par)
importFrom(igraph,arpack)
importFrom(igraph,clusters)
importFrom(igraph,graph.adjacency)
importFrom(isva,EstDimRMT)
importFrom(marray,maPalette)
importFrom(methods,as)
importFrom(scater,librarySizeFactors)
importFrom(scater,normalize)
importFrom(stats,as.dist)
importFrom(stats,cor)
importFrom(stats,median)
importFrom(stats,pnorm)
importFrom(stats,sd)
importFrom(stats,var)
importFrom(stats,wilcox.test)
importFrom(wordspace,normalize.cols)