DESCRIPTION

Package: BioPathNet
Type: Package
Title: BioPathNet: Three Pod Analysis System
Version: 0.2.0
Authors@R: c(
  person(
    given = c("Ali", "Sajid"),
    family = "Imami",
    role = c("aut", "cre"),
    email = "Ali.Sajid.Imami@gmail.com",
    comment = c(ORCID = "0000-0003-3684-3539")
  ),
  person(
    given = "Khaled",
    family = "Alganem",
    role = c("aut"),
    email = "Khaled.Alganem@rockets.utoledo.edu",
    comment = c(ORCID = "0000-0003-3234-7669")
  ),
  person(
    given = "Xiaolu",
    family = "Zhang",
    role = c("aut"),
    email = "Xiaolu.Zhang@utoledo.edu",
    comment = c(ORCID = "0000-0001-5595-7270")
  ),
  person(
    given = c("Marissa", "Ann"),
    family = "Smail",
    role = c("aut"),
    email = "smailma@mail.uc.edu",
    comment = c(ORCID = "0000-0002-9743-3771")
  ))
Maintainer: Ali Sajid Imami <Ali.Sajid.Imami@gmail.com>
Description: This package aims to provide a simple interface to perform the Three Pod Analysis of RNASeq dataaset. In addition, this also provides utility functions to perform the individual components.
License: GPL-3
Encoding: UTF-8
LazyData: true
LazyDataCompression: xz
Suggests: 
    testthat
RoxygenNote: 7.2.3
Imports: 
    magrittr,
    tibble,
    readr,
    stringr,
    purrr,
    methods,
    fgsea,
    enrichR,
    rlang,
    stats,
    dplyr,
    tidyr
Collate: 
    'classes.R'
    'BPNList.R'
    'EnrichRResult.R'
    'GSEAResult.R'
    'LEResult.R'
    'S4methods.R'
    'data.R'
    'do_enrichr_pod.R'
    'do_gsea_pod.R'
    'do_leading_pod.R'
    'get_revigo_output.R'
    'prepare_data.R'
Depends: 
    R (>= 2.10)