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Updates to the uniprot metadata script to reflect changes in taxonomy… Python unit testing #342: Commit 83283ca pushed by tgurbich
October 26, 2023 11:44 32s uniprot
uniprot
October 26, 2023 11:44 32s
Merge pull request #64 from EBI-Metagenomics/dev Python unit testing #341: Commit acb52d2 pushed by mberacochea
October 26, 2023 11:22 23s master
master
October 26, 2023 11:22 23s
Support for largue catalogues, >100K MAGs, where dRep requires too much memory Python unit testing #340: Pull request #64 synchronize by mberacochea
October 26, 2023 10:49 26s dev
dev
October 26, 2023 10:49 26s
Merge branch 'master' into dev Python unit testing #339: Commit d31c678 pushed by mberacochea
October 26, 2023 10:49 30s dev
dev
October 26, 2023 10:49 30s
Increase xlarge catalogue chunk size default to 25000 Python unit testing #338: Commit 02ba3fd pushed by mberacochea
October 25, 2023 09:39 29s dev
dev
October 25, 2023 09:39 29s
Uniprot Python unit testing #337: Pull request #62 synchronize by tgurbich
October 24, 2023 16:07 34s uniprot
uniprot
October 24, 2023 16:07 34s
Added multi-threading WIP Python unit testing #336: Commit 9c8810e pushed by tgurbich
October 24, 2023 16:07 40s uniprot
uniprot
October 24, 2023 16:07 40s
Merge pull request #63 from EBI-Metagenomics/xlarge-catalogues Python unit testing #335: Commit 72fddbb pushed by mberacochea
October 24, 2023 14:14 26s dev
dev
October 24, 2023 14:14 26s
dereplication for large catalogues Python unit testing #334: Pull request #63 synchronize by mberacochea
October 24, 2023 14:13 31s xlarge-catalogues
xlarge-catalogues
October 24, 2023 14:13 31s
Rename DREP_RERUN -> DREP_SPECIES_REPS Python unit testing #333: Commit 43793c0 pushed by mberacochea
October 24, 2023 14:13 28s xlarge-catalogues
xlarge-catalogues
October 24, 2023 14:13 28s
Uniprot Python unit testing #332: Pull request #62 synchronize by tgurbich
October 24, 2023 10:08 28s uniprot
uniprot
October 24, 2023 10:08 28s
Added species-level taxonomy for all genomes Python unit testing #331: Commit 6e967cb pushed by tgurbich
October 24, 2023 10:07 25s uniprot
uniprot
October 24, 2023 10:07 25s
dereplication for large catalogues Python unit testing #330: Pull request #63 synchronize by mberacochea
October 23, 2023 16:31 29s xlarge-catalogues
xlarge-catalogues
October 23, 2023 16:31 29s
In EBI's Codon HPC cluster, use the right config for xlarge catalogues. Python unit testing #329: Commit 49147f9 pushed by mberacochea
October 23, 2023 16:31 35s xlarge-catalogues
xlarge-catalogues
October 23, 2023 16:31 35s
dereplication for large catalogues Python unit testing #328: Pull request #63 opened by mberacochea
October 23, 2023 15:26 31s xlarge-catalogues
xlarge-catalogues
October 23, 2023 15:26 31s
Minor tweak Python unit testing #327: Commit 5350d60 pushed by mberacochea
October 23, 2023 15:21 35s xlarge-catalogues
xlarge-catalogues
October 23, 2023 15:21 35s
De-replication subworkflow for large catalogues. Python unit testing #326: Commit bb6e9a3 pushed by mberacochea
October 23, 2023 12:56 30s xlarge-catalogues
xlarge-catalogues
October 23, 2023 12:56 30s
Uniprot Python unit testing #325: Pull request #62 synchronize by tgurbich
October 19, 2023 16:42 24s uniprot
uniprot
October 19, 2023 16:42 24s
Script cleanup Python unit testing #324: Commit d479f07 pushed by tgurbich
October 19, 2023 16:42 26s uniprot
uniprot
October 19, 2023 16:42 26s
Uniprot Python unit testing #323: Pull request #62 synchronize by tgurbich
October 19, 2023 15:41 35s uniprot
uniprot
October 19, 2023 15:41 35s
Added getting taxonomy from INSDC for known GCA accessions Python unit testing #322: Commit a041163 pushed by tgurbich
October 19, 2023 15:41 30s uniprot
uniprot
October 19, 2023 15:41 30s
dRep chunking nextflow implementation Python unit testing #321: Commit 7f2a241 pushed by mberacochea
October 17, 2023 15:41 32s xlarge-catalogues
xlarge-catalogues
October 17, 2023 15:41 32s
Adjust EBI Codon paths Python unit testing #320: Commit 70a4fe4 pushed by mberacochea
October 16, 2023 12:49 32s master
master
October 16, 2023 12:49 32s
Merge branch 'xlarge-catalogues' of github.com:EBI-Metagenomics/genom… Python unit testing #319: Commit a55b2af pushed by mberacochea
October 6, 2023 13:27 26s xlarge-catalogues
xlarge-catalogues
October 6, 2023 13:27 26s
Added drep swf doe large catalogues Python unit testing #318: Commit cfbd7e9 pushed by tgurbich
October 4, 2023 05:38 27s xlarge-catalogues
xlarge-catalogues
October 4, 2023 05:38 27s
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