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otar_profiler

Pipeline for creating Open Targets profile and slim files from EFO.

How to generate profile and slim files

  • Copy the lastest version of efo.owl and components/disease_to_phenotype.owl into the top level of the otar_profiler directory
    • If you are generating this file for the EFO release, you will need to manually copy from your local version after running the make all process
  • run ./otar_ta.sh