setup.cfg

[build_ext]
define = SEQAN_HAS_BZIP2,SEQAN_HAS_ZLIB
undef = NO_UNIQUE_RC
# libraries = z,bz2
## if using system libraries
include-dirs = lib:third-party/zlib:third-party/bzip2:third-party/seqan/core/include:third-party/smhasher
# include-dirs = lib
## if using system libraries (broken)

# define = NDEBUG
# is not needed for most Linux installs
# see the OPT line in /usr/lib/python2.7/config/Makefile which gets included
# in distutils version of CFLAGS

[easy_install]

[aliases]
test=pytest

# See the docstring in versioneer.py for instructions. Note that you must
# re-run 'versioneer.py setup' after changing this section, and commit the
# resulting files.

[versioneer]
VCS = git
style = pep440
versionfile_source = khmer/_version.py
versionfile_build = khmer/_version.py
tag_prefix = v
parentdir_prefix = .