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code to download data from GEO #16

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kingwzun opened this issue Sep 12, 2024 · 1 comment
Open

code to download data from GEO #16

kingwzun opened this issue Sep 12, 2024 · 1 comment

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@kingwzun
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First of all, thank you for open-sourcing the model.
Have you open-sourced the code for downloading data from GEO? If so, which folder is it? I can't find it.
If not, would you consider open-sourcing it?

@javh
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javh commented Oct 22, 2024

Hi @kingwzun, Apologies for the slow reply. This slipped through the cracks.

We haven't shared the code to download from GEO. For the current release of the model, a the data collection was only semi-automated and a lot of the metadata curation was manual.

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