mixs_slots_report.yaml

migs_ba_data:
  description: Data that comply with checklist MigsBa
  title: MigsBa data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_ba_data
  multivalued: true
  range: MigsBa
  inlined: true
  inlined_as_list: true
agriculture_data:
  description: Data that comply with Extension Agriculture
  title: Agriculture data
  domain: MixsCompliantData
  slot_uri: MIXS:agriculture_data
  multivalued: true
  range: Agriculture
  inlined: true
  inlined_as_list: true
migs_ba_agriculture_data:
  description: Data that comply with MigsBa combined with Agriculture
  title: MigsBaAgriculture data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_ba_agriculture_data
  multivalued: true
  range: MigsBaAgriculture
  inlined: true
  inlined_as_list: true
air_data:
  description: Data that comply with Extension Air
  title: Air data
  keywords:
  - air
  domain: MixsCompliantData
  slot_uri: MIXS:air_data
  multivalued: true
  range: Air
  inlined: true
  inlined_as_list: true
migs_ba_air_data:
  description: Data that comply with MigsBa combined with Air
  title: MigsBaAir data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_ba_air_data
  multivalued: true
  range: MigsBaAir
  inlined: true
  inlined_as_list: true
built_environment_data:
  description: Data that comply with Extension BuiltEnvironment
  title: BuiltEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:built_environment_data
  multivalued: true
  range: BuiltEnvironment
  inlined: true
  inlined_as_list: true
migs_ba_built_environment_data:
  description: Data that comply with MigsBa combined with BuiltEnvironment
  title: MigsBaBuiltEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_ba_built_environment_data
  multivalued: true
  range: MigsBaBuiltEnvironment
  inlined: true
  inlined_as_list: true
food_animal_and_animal_feed_data:
  description: Data that comply with Extension FoodAnimalAndAnimalFeed
  title: FoodAnimalAndAnimalFeed data
  domain: MixsCompliantData
  slot_uri: MIXS:food_animal_and_animal_feed_data
  multivalued: true
  range: FoodAnimalAndAnimalFeed
  inlined: true
  inlined_as_list: true
migs_ba_food_animal_and_animal_feed_data:
  description: Data that comply with MigsBa combined with FoodAnimalAndAnimalFeed
  title: MigsBaFoodAnimalAndAnimalFeed data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_ba_food_animal_and_animal_feed_data
  multivalued: true
  range: MigsBaFoodAnimalAndAnimalFeed
  inlined: true
  inlined_as_list: true
food_farm_environment_data:
  description: Data that comply with Extension FoodFarmEnvironment
  title: FoodFarmEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:food_farm_environment_data
  multivalued: true
  range: FoodFarmEnvironment
  inlined: true
  inlined_as_list: true
migs_ba_food_farm_environment_data:
  description: Data that comply with MigsBa combined with FoodFarmEnvironment
  title: MigsBaFoodFarmEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_ba_food_farm_environment_data
  multivalued: true
  range: MigsBaFoodFarmEnvironment
  inlined: true
  inlined_as_list: true
food_food_production_facility_data:
  description: Data that comply with Extension FoodFoodProductionFacility
  title: FoodFoodProductionFacility data
  domain: MixsCompliantData
  slot_uri: MIXS:food_food_production_facility_data
  multivalued: true
  range: FoodFoodProductionFacility
  inlined: true
  inlined_as_list: true
migs_ba_food_food_production_facility_data:
  description: Data that comply with MigsBa combined with FoodFoodProductionFacility
  title: MigsBaFoodFoodProductionFacility data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_ba_food_food_production_facility_data
  multivalued: true
  range: MigsBaFoodFoodProductionFacility
  inlined: true
  inlined_as_list: true
food_human_foods_data:
  description: Data that comply with Extension FoodHumanFoods
  title: FoodHumanFoods data
  domain: MixsCompliantData
  slot_uri: MIXS:food_human_foods_data
  multivalued: true
  range: FoodHumanFoods
  inlined: true
  inlined_as_list: true
migs_ba_food_human_foods_data:
  description: Data that comply with MigsBa combined with FoodHumanFoods
  title: MigsBaFoodHumanFoods data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_ba_food_human_foods_data
  multivalued: true
  range: MigsBaFoodHumanFoods
  inlined: true
  inlined_as_list: true
host_associated_data:
  description: Data that comply with Extension HostAssociated
  title: HostAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:host_associated_data
  multivalued: true
  range: HostAssociated
  inlined: true
  inlined_as_list: true
migs_ba_host_associated_data:
  description: Data that comply with MigsBa combined with HostAssociated
  title: MigsBaHostAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_ba_host_associated_data
  multivalued: true
  range: MigsBaHostAssociated
  inlined: true
  inlined_as_list: true
human_associated_data:
  description: Data that comply with Extension HumanAssociated
  title: HumanAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:human_associated_data
  multivalued: true
  range: HumanAssociated
  inlined: true
  inlined_as_list: true
migs_ba_human_associated_data:
  description: Data that comply with MigsBa combined with HumanAssociated
  title: MigsBaHumanAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_ba_human_associated_data
  multivalued: true
  range: MigsBaHumanAssociated
  inlined: true
  inlined_as_list: true
human_gut_data:
  description: Data that comply with Extension HumanGut
  title: HumanGut data
  domain: MixsCompliantData
  slot_uri: MIXS:human_gut_data
  multivalued: true
  range: HumanGut
  inlined: true
  inlined_as_list: true
migs_ba_human_gut_data:
  description: Data that comply with MigsBa combined with HumanGut
  title: MigsBaHumanGut data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_ba_human_gut_data
  multivalued: true
  range: MigsBaHumanGut
  inlined: true
  inlined_as_list: true
human_oral_data:
  description: Data that comply with Extension HumanOral
  title: HumanOral data
  domain: MixsCompliantData
  slot_uri: MIXS:human_oral_data
  multivalued: true
  range: HumanOral
  inlined: true
  inlined_as_list: true
migs_ba_human_oral_data:
  description: Data that comply with MigsBa combined with HumanOral
  title: MigsBaHumanOral data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_ba_human_oral_data
  multivalued: true
  range: MigsBaHumanOral
  inlined: true
  inlined_as_list: true
human_skin_data:
  description: Data that comply with Extension HumanSkin
  title: HumanSkin data
  domain: MixsCompliantData
  slot_uri: MIXS:human_skin_data
  multivalued: true
  range: HumanSkin
  inlined: true
  inlined_as_list: true
migs_ba_human_skin_data:
  description: Data that comply with MigsBa combined with HumanSkin
  title: MigsBaHumanSkin data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_ba_human_skin_data
  multivalued: true
  range: MigsBaHumanSkin
  inlined: true
  inlined_as_list: true
human_vaginal_data:
  description: Data that comply with Extension HumanVaginal
  title: HumanVaginal data
  domain: MixsCompliantData
  slot_uri: MIXS:human_vaginal_data
  multivalued: true
  range: HumanVaginal
  inlined: true
  inlined_as_list: true
migs_ba_human_vaginal_data:
  description: Data that comply with MigsBa combined with HumanVaginal
  title: MigsBaHumanVaginal data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_ba_human_vaginal_data
  multivalued: true
  range: MigsBaHumanVaginal
  inlined: true
  inlined_as_list: true
hydrocarbon_resources_cores_data:
  description: Data that comply with Extension HydrocarbonResourcesCores
  title: HydrocarbonResourcesCores data
  domain: MixsCompliantData
  slot_uri: MIXS:hydrocarbon_resources_cores_data
  multivalued: true
  range: HydrocarbonResourcesCores
  inlined: true
  inlined_as_list: true
migs_ba_hydrocarbon_resources_cores_data:
  description: Data that comply with MigsBa combined with HydrocarbonResourcesCores
  title: MigsBaHydrocarbonResourcesCores data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_ba_hydrocarbon_resources_cores_data
  multivalued: true
  range: MigsBaHydrocarbonResourcesCores
  inlined: true
  inlined_as_list: true
hydrocarbon_resources_fluids_swabs_data:
  description: Data that comply with Extension HydrocarbonResourcesFluidsSwabs
  title: HydrocarbonResourcesFluidsSwabs data
  domain: MixsCompliantData
  slot_uri: MIXS:hydrocarbon_resources_fluids_swabs_data
  multivalued: true
  range: HydrocarbonResourcesFluidsSwabs
  inlined: true
  inlined_as_list: true
migs_ba_hydrocarbon_resources_fluids_swabs_data:
  description: Data that comply with MigsBa combined with HydrocarbonResourcesFluidsSwabs
  title: MigsBaHydrocarbonResourcesFluidsSwabs data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_ba_hydrocarbon_resources_fluids_swabs_data
  multivalued: true
  range: MigsBaHydrocarbonResourcesFluidsSwabs
  inlined: true
  inlined_as_list: true
microbial_mat_biofilm_data:
  description: Data that comply with Extension MicrobialMatBiofilm
  title: MicrobialMatBiofilm data
  domain: MixsCompliantData
  slot_uri: MIXS:microbial_mat_biofilm_data
  multivalued: true
  range: MicrobialMatBiofilm
  inlined: true
  inlined_as_list: true
migs_ba_microbial_mat_biofilm_data:
  description: Data that comply with MigsBa combined with MicrobialMatBiofilm
  title: MigsBaMicrobialMatBiofilm data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_ba_microbial_mat_biofilm_data
  multivalued: true
  range: MigsBaMicrobialMatBiofilm
  inlined: true
  inlined_as_list: true
miscellaneous_natural_or_artificial_environment_data:
  description: Data that comply with Extension MiscellaneousNaturalOrArtificialEnvironment
  title: MiscellaneousNaturalOrArtificialEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:miscellaneous_natural_or_artificial_environment_data
  multivalued: true
  range: MiscellaneousNaturalOrArtificialEnvironment
  inlined: true
  inlined_as_list: true
migs_ba_miscellaneous_natural_or_artificial_environment_data:
  description: Data that comply with MigsBa combined with MiscellaneousNaturalOrArtificialEnvironment
  title: MigsBaMiscellaneousNaturalOrArtificialEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_ba_miscellaneous_natural_or_artificial_environment_data
  multivalued: true
  range: MigsBaMiscellaneousNaturalOrArtificialEnvironment
  inlined: true
  inlined_as_list: true
plant_associated_data:
  description: Data that comply with Extension PlantAssociated
  title: PlantAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:plant_associated_data
  multivalued: true
  range: PlantAssociated
  inlined: true
  inlined_as_list: true
migs_ba_plant_associated_data:
  description: Data that comply with MigsBa combined with PlantAssociated
  title: MigsBaPlantAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_ba_plant_associated_data
  multivalued: true
  range: MigsBaPlantAssociated
  inlined: true
  inlined_as_list: true
sediment_data:
  description: Data that comply with Extension Sediment
  title: Sediment data
  keywords:
  - sediment
  domain: MixsCompliantData
  slot_uri: MIXS:sediment_data
  multivalued: true
  range: Sediment
  inlined: true
  inlined_as_list: true
migs_ba_sediment_data:
  description: Data that comply with MigsBa combined with Sediment
  title: MigsBaSediment data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_ba_sediment_data
  multivalued: true
  range: MigsBaSediment
  inlined: true
  inlined_as_list: true
soil_data:
  description: Data that comply with Extension Soil
  title: Soil data
  keywords:
  - soil
  domain: MixsCompliantData
  slot_uri: MIXS:soil_data
  multivalued: true
  range: Soil
  inlined: true
  inlined_as_list: true
migs_ba_soil_data:
  description: Data that comply with MigsBa combined with Soil
  title: MigsBaSoil data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_ba_soil_data
  multivalued: true
  range: MigsBaSoil
  inlined: true
  inlined_as_list: true
symbiont_associated_data:
  description: Data that comply with Extension SymbiontAssociated
  title: SymbiontAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:symbiont_associated_data
  multivalued: true
  range: SymbiontAssociated
  inlined: true
  inlined_as_list: true
migs_ba_symbiont_associated_data:
  description: Data that comply with MigsBa combined with SymbiontAssociated
  title: MigsBaSymbiontAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_ba_symbiont_associated_data
  multivalued: true
  range: MigsBaSymbiontAssociated
  inlined: true
  inlined_as_list: true
wastewater_sludge_data:
  description: Data that comply with Extension WastewaterSludge
  title: WastewaterSludge data
  domain: MixsCompliantData
  slot_uri: MIXS:wastewater_sludge_data
  multivalued: true
  range: WastewaterSludge
  inlined: true
  inlined_as_list: true
migs_ba_wastewater_sludge_data:
  description: Data that comply with MigsBa combined with WastewaterSludge
  title: MigsBaWastewaterSludge data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_ba_wastewater_sludge_data
  multivalued: true
  range: MigsBaWastewaterSludge
  inlined: true
  inlined_as_list: true
water_data:
  description: Data that comply with Extension Water
  title: Water data
  keywords:
  - water
  domain: MixsCompliantData
  slot_uri: MIXS:water_data
  multivalued: true
  range: Water
  inlined: true
  inlined_as_list: true
migs_ba_water_data:
  description: Data that comply with MigsBa combined with Water
  title: MigsBaWater data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_ba_water_data
  multivalued: true
  range: MigsBaWater
  inlined: true
  inlined_as_list: true
migs_eu_data:
  description: Data that comply with checklist MigsEu
  title: MigsEu data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_eu_data
  multivalued: true
  range: MigsEu
  inlined: true
  inlined_as_list: true
migs_eu_agriculture_data:
  description: Data that comply with MigsEu combined with Agriculture
  title: MigsEuAgriculture data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_eu_agriculture_data
  multivalued: true
  range: MigsEuAgriculture
  inlined: true
  inlined_as_list: true
migs_eu_air_data:
  description: Data that comply with MigsEu combined with Air
  title: MigsEuAir data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_eu_air_data
  multivalued: true
  range: MigsEuAir
  inlined: true
  inlined_as_list: true
migs_eu_built_environment_data:
  description: Data that comply with MigsEu combined with BuiltEnvironment
  title: MigsEuBuiltEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_eu_built_environment_data
  multivalued: true
  range: MigsEuBuiltEnvironment
  inlined: true
  inlined_as_list: true
migs_eu_food_animal_and_animal_feed_data:
  description: Data that comply with MigsEu combined with FoodAnimalAndAnimalFeed
  title: MigsEuFoodAnimalAndAnimalFeed data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_eu_food_animal_and_animal_feed_data
  multivalued: true
  range: MigsEuFoodAnimalAndAnimalFeed
  inlined: true
  inlined_as_list: true
migs_eu_food_farm_environment_data:
  description: Data that comply with MigsEu combined with FoodFarmEnvironment
  title: MigsEuFoodFarmEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_eu_food_farm_environment_data
  multivalued: true
  range: MigsEuFoodFarmEnvironment
  inlined: true
  inlined_as_list: true
migs_eu_food_food_production_facility_data:
  description: Data that comply with MigsEu combined with FoodFoodProductionFacility
  title: MigsEuFoodFoodProductionFacility data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_eu_food_food_production_facility_data
  multivalued: true
  range: MigsEuFoodFoodProductionFacility
  inlined: true
  inlined_as_list: true
migs_eu_food_human_foods_data:
  description: Data that comply with MigsEu combined with FoodHumanFoods
  title: MigsEuFoodHumanFoods data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_eu_food_human_foods_data
  multivalued: true
  range: MigsEuFoodHumanFoods
  inlined: true
  inlined_as_list: true
migs_eu_host_associated_data:
  description: Data that comply with MigsEu combined with HostAssociated
  title: MigsEuHostAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_eu_host_associated_data
  multivalued: true
  range: MigsEuHostAssociated
  inlined: true
  inlined_as_list: true
migs_eu_human_associated_data:
  description: Data that comply with MigsEu combined with HumanAssociated
  title: MigsEuHumanAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_eu_human_associated_data
  multivalued: true
  range: MigsEuHumanAssociated
  inlined: true
  inlined_as_list: true
migs_eu_human_gut_data:
  description: Data that comply with MigsEu combined with HumanGut
  title: MigsEuHumanGut data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_eu_human_gut_data
  multivalued: true
  range: MigsEuHumanGut
  inlined: true
  inlined_as_list: true
migs_eu_human_oral_data:
  description: Data that comply with MigsEu combined with HumanOral
  title: MigsEuHumanOral data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_eu_human_oral_data
  multivalued: true
  range: MigsEuHumanOral
  inlined: true
  inlined_as_list: true
migs_eu_human_skin_data:
  description: Data that comply with MigsEu combined with HumanSkin
  title: MigsEuHumanSkin data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_eu_human_skin_data
  multivalued: true
  range: MigsEuHumanSkin
  inlined: true
  inlined_as_list: true
migs_eu_human_vaginal_data:
  description: Data that comply with MigsEu combined with HumanVaginal
  title: MigsEuHumanVaginal data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_eu_human_vaginal_data
  multivalued: true
  range: MigsEuHumanVaginal
  inlined: true
  inlined_as_list: true
migs_eu_hydrocarbon_resources_cores_data:
  description: Data that comply with MigsEu combined with HydrocarbonResourcesCores
  title: MigsEuHydrocarbonResourcesCores data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_eu_hydrocarbon_resources_cores_data
  multivalued: true
  range: MigsEuHydrocarbonResourcesCores
  inlined: true
  inlined_as_list: true
migs_eu_hydrocarbon_resources_fluids_swabs_data:
  description: Data that comply with MigsEu combined with HydrocarbonResourcesFluidsSwabs
  title: MigsEuHydrocarbonResourcesFluidsSwabs data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_eu_hydrocarbon_resources_fluids_swabs_data
  multivalued: true
  range: MigsEuHydrocarbonResourcesFluidsSwabs
  inlined: true
  inlined_as_list: true
migs_eu_microbial_mat_biofilm_data:
  description: Data that comply with MigsEu combined with MicrobialMatBiofilm
  title: MigsEuMicrobialMatBiofilm data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_eu_microbial_mat_biofilm_data
  multivalued: true
  range: MigsEuMicrobialMatBiofilm
  inlined: true
  inlined_as_list: true
migs_eu_miscellaneous_natural_or_artificial_environment_data:
  description: Data that comply with MigsEu combined with MiscellaneousNaturalOrArtificialEnvironment
  title: MigsEuMiscellaneousNaturalOrArtificialEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_eu_miscellaneous_natural_or_artificial_environment_data
  multivalued: true
  range: MigsEuMiscellaneousNaturalOrArtificialEnvironment
  inlined: true
  inlined_as_list: true
migs_eu_plant_associated_data:
  description: Data that comply with MigsEu combined with PlantAssociated
  title: MigsEuPlantAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_eu_plant_associated_data
  multivalued: true
  range: MigsEuPlantAssociated
  inlined: true
  inlined_as_list: true
migs_eu_sediment_data:
  description: Data that comply with MigsEu combined with Sediment
  title: MigsEuSediment data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_eu_sediment_data
  multivalued: true
  range: MigsEuSediment
  inlined: true
  inlined_as_list: true
migs_eu_soil_data:
  description: Data that comply with MigsEu combined with Soil
  title: MigsEuSoil data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_eu_soil_data
  multivalued: true
  range: MigsEuSoil
  inlined: true
  inlined_as_list: true
migs_eu_symbiont_associated_data:
  description: Data that comply with MigsEu combined with SymbiontAssociated
  title: MigsEuSymbiontAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_eu_symbiont_associated_data
  multivalued: true
  range: MigsEuSymbiontAssociated
  inlined: true
  inlined_as_list: true
migs_eu_wastewater_sludge_data:
  description: Data that comply with MigsEu combined with WastewaterSludge
  title: MigsEuWastewaterSludge data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_eu_wastewater_sludge_data
  multivalued: true
  range: MigsEuWastewaterSludge
  inlined: true
  inlined_as_list: true
migs_eu_water_data:
  description: Data that comply with MigsEu combined with Water
  title: MigsEuWater data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_eu_water_data
  multivalued: true
  range: MigsEuWater
  inlined: true
  inlined_as_list: true
migs_org_data:
  description: Data that comply with checklist MigsOrg
  title: MigsOrg data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_org_data
  multivalued: true
  range: MigsOrg
  inlined: true
  inlined_as_list: true
migs_org_agriculture_data:
  description: Data that comply with MigsOrg combined with Agriculture
  title: MigsOrgAgriculture data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_org_agriculture_data
  multivalued: true
  range: MigsOrgAgriculture
  inlined: true
  inlined_as_list: true
migs_org_air_data:
  description: Data that comply with MigsOrg combined with Air
  title: MigsOrgAir data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_org_air_data
  multivalued: true
  range: MigsOrgAir
  inlined: true
  inlined_as_list: true
migs_org_built_environment_data:
  description: Data that comply with MigsOrg combined with BuiltEnvironment
  title: MigsOrgBuiltEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_org_built_environment_data
  multivalued: true
  range: MigsOrgBuiltEnvironment
  inlined: true
  inlined_as_list: true
migs_org_food_animal_and_animal_feed_data:
  description: Data that comply with MigsOrg combined with FoodAnimalAndAnimalFeed
  title: MigsOrgFoodAnimalAndAnimalFeed data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_org_food_animal_and_animal_feed_data
  multivalued: true
  range: MigsOrgFoodAnimalAndAnimalFeed
  inlined: true
  inlined_as_list: true
migs_org_food_farm_environment_data:
  description: Data that comply with MigsOrg combined with FoodFarmEnvironment
  title: MigsOrgFoodFarmEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_org_food_farm_environment_data
  multivalued: true
  range: MigsOrgFoodFarmEnvironment
  inlined: true
  inlined_as_list: true
migs_org_food_food_production_facility_data:
  description: Data that comply with MigsOrg combined with FoodFoodProductionFacility
  title: MigsOrgFoodFoodProductionFacility data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_org_food_food_production_facility_data
  multivalued: true
  range: MigsOrgFoodFoodProductionFacility
  inlined: true
  inlined_as_list: true
migs_org_food_human_foods_data:
  description: Data that comply with MigsOrg combined with FoodHumanFoods
  title: MigsOrgFoodHumanFoods data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_org_food_human_foods_data
  multivalued: true
  range: MigsOrgFoodHumanFoods
  inlined: true
  inlined_as_list: true
migs_org_host_associated_data:
  description: Data that comply with MigsOrg combined with HostAssociated
  title: MigsOrgHostAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_org_host_associated_data
  multivalued: true
  range: MigsOrgHostAssociated
  inlined: true
  inlined_as_list: true
migs_org_human_associated_data:
  description: Data that comply with MigsOrg combined with HumanAssociated
  title: MigsOrgHumanAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_org_human_associated_data
  multivalued: true
  range: MigsOrgHumanAssociated
  inlined: true
  inlined_as_list: true
migs_org_human_gut_data:
  description: Data that comply with MigsOrg combined with HumanGut
  title: MigsOrgHumanGut data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_org_human_gut_data
  multivalued: true
  range: MigsOrgHumanGut
  inlined: true
  inlined_as_list: true
migs_org_human_oral_data:
  description: Data that comply with MigsOrg combined with HumanOral
  title: MigsOrgHumanOral data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_org_human_oral_data
  multivalued: true
  range: MigsOrgHumanOral
  inlined: true
  inlined_as_list: true
migs_org_human_skin_data:
  description: Data that comply with MigsOrg combined with HumanSkin
  title: MigsOrgHumanSkin data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_org_human_skin_data
  multivalued: true
  range: MigsOrgHumanSkin
  inlined: true
  inlined_as_list: true
migs_org_human_vaginal_data:
  description: Data that comply with MigsOrg combined with HumanVaginal
  title: MigsOrgHumanVaginal data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_org_human_vaginal_data
  multivalued: true
  range: MigsOrgHumanVaginal
  inlined: true
  inlined_as_list: true
migs_org_hydrocarbon_resources_cores_data:
  description: Data that comply with MigsOrg combined with HydrocarbonResourcesCores
  title: MigsOrgHydrocarbonResourcesCores data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_org_hydrocarbon_resources_cores_data
  multivalued: true
  range: MigsOrgHydrocarbonResourcesCores
  inlined: true
  inlined_as_list: true
migs_org_hydrocarbon_resources_fluids_swabs_data:
  description: Data that comply with MigsOrg combined with HydrocarbonResourcesFluidsSwabs
  title: MigsOrgHydrocarbonResourcesFluidsSwabs data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_org_hydrocarbon_resources_fluids_swabs_data
  multivalued: true
  range: MigsOrgHydrocarbonResourcesFluidsSwabs
  inlined: true
  inlined_as_list: true
migs_org_microbial_mat_biofilm_data:
  description: Data that comply with MigsOrg combined with MicrobialMatBiofilm
  title: MigsOrgMicrobialMatBiofilm data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_org_microbial_mat_biofilm_data
  multivalued: true
  range: MigsOrgMicrobialMatBiofilm
  inlined: true
  inlined_as_list: true
migs_org_miscellaneous_natural_or_artificial_environment_data:
  description: Data that comply with MigsOrg combined with MiscellaneousNaturalOrArtificialEnvironment
  title: MigsOrgMiscellaneousNaturalOrArtificialEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_org_miscellaneous_natural_or_artificial_environment_data
  multivalued: true
  range: MigsOrgMiscellaneousNaturalOrArtificialEnvironment
  inlined: true
  inlined_as_list: true
migs_org_plant_associated_data:
  description: Data that comply with MigsOrg combined with PlantAssociated
  title: MigsOrgPlantAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_org_plant_associated_data
  multivalued: true
  range: MigsOrgPlantAssociated
  inlined: true
  inlined_as_list: true
migs_org_sediment_data:
  description: Data that comply with MigsOrg combined with Sediment
  title: MigsOrgSediment data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_org_sediment_data
  multivalued: true
  range: MigsOrgSediment
  inlined: true
  inlined_as_list: true
migs_org_soil_data:
  description: Data that comply with MigsOrg combined with Soil
  title: MigsOrgSoil data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_org_soil_data
  multivalued: true
  range: MigsOrgSoil
  inlined: true
  inlined_as_list: true
migs_org_symbiont_associated_data:
  description: Data that comply with MigsOrg combined with SymbiontAssociated
  title: MigsOrgSymbiontAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_org_symbiont_associated_data
  multivalued: true
  range: MigsOrgSymbiontAssociated
  inlined: true
  inlined_as_list: true
migs_org_wastewater_sludge_data:
  description: Data that comply with MigsOrg combined with WastewaterSludge
  title: MigsOrgWastewaterSludge data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_org_wastewater_sludge_data
  multivalued: true
  range: MigsOrgWastewaterSludge
  inlined: true
  inlined_as_list: true
migs_org_water_data:
  description: Data that comply with MigsOrg combined with Water
  title: MigsOrgWater data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_org_water_data
  multivalued: true
  range: MigsOrgWater
  inlined: true
  inlined_as_list: true
migs_pl_data:
  description: Data that comply with checklist MigsPl
  title: MigsPl data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_pl_data
  multivalued: true
  range: MigsPl
  inlined: true
  inlined_as_list: true
migs_pl_agriculture_data:
  description: Data that comply with MigsPl combined with Agriculture
  title: MigsPlAgriculture data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_pl_agriculture_data
  multivalued: true
  range: MigsPlAgriculture
  inlined: true
  inlined_as_list: true
migs_pl_air_data:
  description: Data that comply with MigsPl combined with Air
  title: MigsPlAir data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_pl_air_data
  multivalued: true
  range: MigsPlAir
  inlined: true
  inlined_as_list: true
migs_pl_built_environment_data:
  description: Data that comply with MigsPl combined with BuiltEnvironment
  title: MigsPlBuiltEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_pl_built_environment_data
  multivalued: true
  range: MigsPlBuiltEnvironment
  inlined: true
  inlined_as_list: true
migs_pl_food_animal_and_animal_feed_data:
  description: Data that comply with MigsPl combined with FoodAnimalAndAnimalFeed
  title: MigsPlFoodAnimalAndAnimalFeed data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_pl_food_animal_and_animal_feed_data
  multivalued: true
  range: MigsPlFoodAnimalAndAnimalFeed
  inlined: true
  inlined_as_list: true
migs_pl_food_farm_environment_data:
  description: Data that comply with MigsPl combined with FoodFarmEnvironment
  title: MigsPlFoodFarmEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_pl_food_farm_environment_data
  multivalued: true
  range: MigsPlFoodFarmEnvironment
  inlined: true
  inlined_as_list: true
migs_pl_food_food_production_facility_data:
  description: Data that comply with MigsPl combined with FoodFoodProductionFacility
  title: MigsPlFoodFoodProductionFacility data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_pl_food_food_production_facility_data
  multivalued: true
  range: MigsPlFoodFoodProductionFacility
  inlined: true
  inlined_as_list: true
migs_pl_food_human_foods_data:
  description: Data that comply with MigsPl combined with FoodHumanFoods
  title: MigsPlFoodHumanFoods data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_pl_food_human_foods_data
  multivalued: true
  range: MigsPlFoodHumanFoods
  inlined: true
  inlined_as_list: true
migs_pl_host_associated_data:
  description: Data that comply with MigsPl combined with HostAssociated
  title: MigsPlHostAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_pl_host_associated_data
  multivalued: true
  range: MigsPlHostAssociated
  inlined: true
  inlined_as_list: true
migs_pl_human_associated_data:
  description: Data that comply with MigsPl combined with HumanAssociated
  title: MigsPlHumanAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_pl_human_associated_data
  multivalued: true
  range: MigsPlHumanAssociated
  inlined: true
  inlined_as_list: true
migs_pl_human_gut_data:
  description: Data that comply with MigsPl combined with HumanGut
  title: MigsPlHumanGut data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_pl_human_gut_data
  multivalued: true
  range: MigsPlHumanGut
  inlined: true
  inlined_as_list: true
migs_pl_human_oral_data:
  description: Data that comply with MigsPl combined with HumanOral
  title: MigsPlHumanOral data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_pl_human_oral_data
  multivalued: true
  range: MigsPlHumanOral
  inlined: true
  inlined_as_list: true
migs_pl_human_skin_data:
  description: Data that comply with MigsPl combined with HumanSkin
  title: MigsPlHumanSkin data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_pl_human_skin_data
  multivalued: true
  range: MigsPlHumanSkin
  inlined: true
  inlined_as_list: true
migs_pl_human_vaginal_data:
  description: Data that comply with MigsPl combined with HumanVaginal
  title: MigsPlHumanVaginal data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_pl_human_vaginal_data
  multivalued: true
  range: MigsPlHumanVaginal
  inlined: true
  inlined_as_list: true
migs_pl_hydrocarbon_resources_cores_data:
  description: Data that comply with MigsPl combined with HydrocarbonResourcesCores
  title: MigsPlHydrocarbonResourcesCores data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_pl_hydrocarbon_resources_cores_data
  multivalued: true
  range: MigsPlHydrocarbonResourcesCores
  inlined: true
  inlined_as_list: true
migs_pl_hydrocarbon_resources_fluids_swabs_data:
  description: Data that comply with MigsPl combined with HydrocarbonResourcesFluidsSwabs
  title: MigsPlHydrocarbonResourcesFluidsSwabs data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_pl_hydrocarbon_resources_fluids_swabs_data
  multivalued: true
  range: MigsPlHydrocarbonResourcesFluidsSwabs
  inlined: true
  inlined_as_list: true
migs_pl_microbial_mat_biofilm_data:
  description: Data that comply with MigsPl combined with MicrobialMatBiofilm
  title: MigsPlMicrobialMatBiofilm data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_pl_microbial_mat_biofilm_data
  multivalued: true
  range: MigsPlMicrobialMatBiofilm
  inlined: true
  inlined_as_list: true
migs_pl_miscellaneous_natural_or_artificial_environment_data:
  description: Data that comply with MigsPl combined with MiscellaneousNaturalOrArtificialEnvironment
  title: MigsPlMiscellaneousNaturalOrArtificialEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_pl_miscellaneous_natural_or_artificial_environment_data
  multivalued: true
  range: MigsPlMiscellaneousNaturalOrArtificialEnvironment
  inlined: true
  inlined_as_list: true
migs_pl_plant_associated_data:
  description: Data that comply with MigsPl combined with PlantAssociated
  title: MigsPlPlantAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_pl_plant_associated_data
  multivalued: true
  range: MigsPlPlantAssociated
  inlined: true
  inlined_as_list: true
migs_pl_sediment_data:
  description: Data that comply with MigsPl combined with Sediment
  title: MigsPlSediment data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_pl_sediment_data
  multivalued: true
  range: MigsPlSediment
  inlined: true
  inlined_as_list: true
migs_pl_soil_data:
  description: Data that comply with MigsPl combined with Soil
  title: MigsPlSoil data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_pl_soil_data
  multivalued: true
  range: MigsPlSoil
  inlined: true
  inlined_as_list: true
migs_pl_symbiont_associated_data:
  description: Data that comply with MigsPl combined with SymbiontAssociated
  title: MigsPlSymbiontAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_pl_symbiont_associated_data
  multivalued: true
  range: MigsPlSymbiontAssociated
  inlined: true
  inlined_as_list: true
migs_pl_wastewater_sludge_data:
  description: Data that comply with MigsPl combined with WastewaterSludge
  title: MigsPlWastewaterSludge data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_pl_wastewater_sludge_data
  multivalued: true
  range: MigsPlWastewaterSludge
  inlined: true
  inlined_as_list: true
migs_pl_water_data:
  description: Data that comply with MigsPl combined with Water
  title: MigsPlWater data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_pl_water_data
  multivalued: true
  range: MigsPlWater
  inlined: true
  inlined_as_list: true
migs_vi_data:
  description: Data that comply with checklist MigsVi
  title: MigsVi data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_vi_data
  multivalued: true
  range: MigsVi
  inlined: true
  inlined_as_list: true
migs_vi_agriculture_data:
  description: Data that comply with MigsVi combined with Agriculture
  title: MigsViAgriculture data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_vi_agriculture_data
  multivalued: true
  range: MigsViAgriculture
  inlined: true
  inlined_as_list: true
migs_vi_air_data:
  description: Data that comply with MigsVi combined with Air
  title: MigsViAir data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_vi_air_data
  multivalued: true
  range: MigsViAir
  inlined: true
  inlined_as_list: true
migs_vi_built_environment_data:
  description: Data that comply with MigsVi combined with BuiltEnvironment
  title: MigsViBuiltEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_vi_built_environment_data
  multivalued: true
  range: MigsViBuiltEnvironment
  inlined: true
  inlined_as_list: true
migs_vi_food_animal_and_animal_feed_data:
  description: Data that comply with MigsVi combined with FoodAnimalAndAnimalFeed
  title: MigsViFoodAnimalAndAnimalFeed data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_vi_food_animal_and_animal_feed_data
  multivalued: true
  range: MigsViFoodAnimalAndAnimalFeed
  inlined: true
  inlined_as_list: true
migs_vi_food_farm_environment_data:
  description: Data that comply with MigsVi combined with FoodFarmEnvironment
  title: MigsViFoodFarmEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_vi_food_farm_environment_data
  multivalued: true
  range: MigsViFoodFarmEnvironment
  inlined: true
  inlined_as_list: true
migs_vi_food_food_production_facility_data:
  description: Data that comply with MigsVi combined with FoodFoodProductionFacility
  title: MigsViFoodFoodProductionFacility data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_vi_food_food_production_facility_data
  multivalued: true
  range: MigsViFoodFoodProductionFacility
  inlined: true
  inlined_as_list: true
migs_vi_food_human_foods_data:
  description: Data that comply with MigsVi combined with FoodHumanFoods
  title: MigsViFoodHumanFoods data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_vi_food_human_foods_data
  multivalued: true
  range: MigsViFoodHumanFoods
  inlined: true
  inlined_as_list: true
migs_vi_host_associated_data:
  description: Data that comply with MigsVi combined with HostAssociated
  title: MigsViHostAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_vi_host_associated_data
  multivalued: true
  range: MigsViHostAssociated
  inlined: true
  inlined_as_list: true
migs_vi_human_associated_data:
  description: Data that comply with MigsVi combined with HumanAssociated
  title: MigsViHumanAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_vi_human_associated_data
  multivalued: true
  range: MigsViHumanAssociated
  inlined: true
  inlined_as_list: true
migs_vi_human_gut_data:
  description: Data that comply with MigsVi combined with HumanGut
  title: MigsViHumanGut data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_vi_human_gut_data
  multivalued: true
  range: MigsViHumanGut
  inlined: true
  inlined_as_list: true
migs_vi_human_oral_data:
  description: Data that comply with MigsVi combined with HumanOral
  title: MigsViHumanOral data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_vi_human_oral_data
  multivalued: true
  range: MigsViHumanOral
  inlined: true
  inlined_as_list: true
migs_vi_human_skin_data:
  description: Data that comply with MigsVi combined with HumanSkin
  title: MigsViHumanSkin data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_vi_human_skin_data
  multivalued: true
  range: MigsViHumanSkin
  inlined: true
  inlined_as_list: true
migs_vi_human_vaginal_data:
  description: Data that comply with MigsVi combined with HumanVaginal
  title: MigsViHumanVaginal data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_vi_human_vaginal_data
  multivalued: true
  range: MigsViHumanVaginal
  inlined: true
  inlined_as_list: true
migs_vi_hydrocarbon_resources_cores_data:
  description: Data that comply with MigsVi combined with HydrocarbonResourcesCores
  title: MigsViHydrocarbonResourcesCores data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_vi_hydrocarbon_resources_cores_data
  multivalued: true
  range: MigsViHydrocarbonResourcesCores
  inlined: true
  inlined_as_list: true
migs_vi_hydrocarbon_resources_fluids_swabs_data:
  description: Data that comply with MigsVi combined with HydrocarbonResourcesFluidsSwabs
  title: MigsViHydrocarbonResourcesFluidsSwabs data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_vi_hydrocarbon_resources_fluids_swabs_data
  multivalued: true
  range: MigsViHydrocarbonResourcesFluidsSwabs
  inlined: true
  inlined_as_list: true
migs_vi_microbial_mat_biofilm_data:
  description: Data that comply with MigsVi combined with MicrobialMatBiofilm
  title: MigsViMicrobialMatBiofilm data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_vi_microbial_mat_biofilm_data
  multivalued: true
  range: MigsViMicrobialMatBiofilm
  inlined: true
  inlined_as_list: true
migs_vi_miscellaneous_natural_or_artificial_environment_data:
  description: Data that comply with MigsVi combined with MiscellaneousNaturalOrArtificialEnvironment
  title: MigsViMiscellaneousNaturalOrArtificialEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_vi_miscellaneous_natural_or_artificial_environment_data
  multivalued: true
  range: MigsViMiscellaneousNaturalOrArtificialEnvironment
  inlined: true
  inlined_as_list: true
migs_vi_plant_associated_data:
  description: Data that comply with MigsVi combined with PlantAssociated
  title: MigsViPlantAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_vi_plant_associated_data
  multivalued: true
  range: MigsViPlantAssociated
  inlined: true
  inlined_as_list: true
migs_vi_sediment_data:
  description: Data that comply with MigsVi combined with Sediment
  title: MigsViSediment data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_vi_sediment_data
  multivalued: true
  range: MigsViSediment
  inlined: true
  inlined_as_list: true
migs_vi_soil_data:
  description: Data that comply with MigsVi combined with Soil
  title: MigsViSoil data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_vi_soil_data
  multivalued: true
  range: MigsViSoil
  inlined: true
  inlined_as_list: true
migs_vi_symbiont_associated_data:
  description: Data that comply with MigsVi combined with SymbiontAssociated
  title: MigsViSymbiontAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_vi_symbiont_associated_data
  multivalued: true
  range: MigsViSymbiontAssociated
  inlined: true
  inlined_as_list: true
migs_vi_wastewater_sludge_data:
  description: Data that comply with MigsVi combined with WastewaterSludge
  title: MigsViWastewaterSludge data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_vi_wastewater_sludge_data
  multivalued: true
  range: MigsViWastewaterSludge
  inlined: true
  inlined_as_list: true
migs_vi_water_data:
  description: Data that comply with MigsVi combined with Water
  title: MigsViWater data
  domain: MixsCompliantData
  slot_uri: MIXS:migs_vi_water_data
  multivalued: true
  range: MigsViWater
  inlined: true
  inlined_as_list: true
mimag_data:
  description: Data that comply with checklist Mimag
  title: Mimag data
  domain: MixsCompliantData
  slot_uri: MIXS:mimag_data
  multivalued: true
  range: Mimag
  inlined: true
  inlined_as_list: true
mimag_agriculture_data:
  description: Data that comply with Mimag combined with Agriculture
  title: MimagAgriculture data
  domain: MixsCompliantData
  slot_uri: MIXS:mimag_agriculture_data
  multivalued: true
  range: MimagAgriculture
  inlined: true
  inlined_as_list: true
mimag_air_data:
  description: Data that comply with Mimag combined with Air
  title: MimagAir data
  domain: MixsCompliantData
  slot_uri: MIXS:mimag_air_data
  multivalued: true
  range: MimagAir
  inlined: true
  inlined_as_list: true
mimag_built_environment_data:
  description: Data that comply with Mimag combined with BuiltEnvironment
  title: MimagBuiltEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:mimag_built_environment_data
  multivalued: true
  range: MimagBuiltEnvironment
  inlined: true
  inlined_as_list: true
mimag_food_animal_and_animal_feed_data:
  description: Data that comply with Mimag combined with FoodAnimalAndAnimalFeed
  title: MimagFoodAnimalAndAnimalFeed data
  domain: MixsCompliantData
  slot_uri: MIXS:mimag_food_animal_and_animal_feed_data
  multivalued: true
  range: MimagFoodAnimalAndAnimalFeed
  inlined: true
  inlined_as_list: true
mimag_food_farm_environment_data:
  description: Data that comply with Mimag combined with FoodFarmEnvironment
  title: MimagFoodFarmEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:mimag_food_farm_environment_data
  multivalued: true
  range: MimagFoodFarmEnvironment
  inlined: true
  inlined_as_list: true
mimag_food_food_production_facility_data:
  description: Data that comply with Mimag combined with FoodFoodProductionFacility
  title: MimagFoodFoodProductionFacility data
  domain: MixsCompliantData
  slot_uri: MIXS:mimag_food_food_production_facility_data
  multivalued: true
  range: MimagFoodFoodProductionFacility
  inlined: true
  inlined_as_list: true
mimag_food_human_foods_data:
  description: Data that comply with Mimag combined with FoodHumanFoods
  title: MimagFoodHumanFoods data
  domain: MixsCompliantData
  slot_uri: MIXS:mimag_food_human_foods_data
  multivalued: true
  range: MimagFoodHumanFoods
  inlined: true
  inlined_as_list: true
mimag_host_associated_data:
  description: Data that comply with Mimag combined with HostAssociated
  title: MimagHostAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:mimag_host_associated_data
  multivalued: true
  range: MimagHostAssociated
  inlined: true
  inlined_as_list: true
mimag_human_associated_data:
  description: Data that comply with Mimag combined with HumanAssociated
  title: MimagHumanAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:mimag_human_associated_data
  multivalued: true
  range: MimagHumanAssociated
  inlined: true
  inlined_as_list: true
mimag_human_gut_data:
  description: Data that comply with Mimag combined with HumanGut
  title: MimagHumanGut data
  domain: MixsCompliantData
  slot_uri: MIXS:mimag_human_gut_data
  multivalued: true
  range: MimagHumanGut
  inlined: true
  inlined_as_list: true
mimag_human_oral_data:
  description: Data that comply with Mimag combined with HumanOral
  title: MimagHumanOral data
  domain: MixsCompliantData
  slot_uri: MIXS:mimag_human_oral_data
  multivalued: true
  range: MimagHumanOral
  inlined: true
  inlined_as_list: true
mimag_human_skin_data:
  description: Data that comply with Mimag combined with HumanSkin
  title: MimagHumanSkin data
  domain: MixsCompliantData
  slot_uri: MIXS:mimag_human_skin_data
  multivalued: true
  range: MimagHumanSkin
  inlined: true
  inlined_as_list: true
mimag_human_vaginal_data:
  description: Data that comply with Mimag combined with HumanVaginal
  title: MimagHumanVaginal data
  domain: MixsCompliantData
  slot_uri: MIXS:mimag_human_vaginal_data
  multivalued: true
  range: MimagHumanVaginal
  inlined: true
  inlined_as_list: true
mimag_hydrocarbon_resources_cores_data:
  description: Data that comply with Mimag combined with HydrocarbonResourcesCores
  title: MimagHydrocarbonResourcesCores data
  domain: MixsCompliantData
  slot_uri: MIXS:mimag_hydrocarbon_resources_cores_data
  multivalued: true
  range: MimagHydrocarbonResourcesCores
  inlined: true
  inlined_as_list: true
mimag_hydrocarbon_resources_fluids_swabs_data:
  description: Data that comply with Mimag combined with HydrocarbonResourcesFluidsSwabs
  title: MimagHydrocarbonResourcesFluidsSwabs data
  domain: MixsCompliantData
  slot_uri: MIXS:mimag_hydrocarbon_resources_fluids_swabs_data
  multivalued: true
  range: MimagHydrocarbonResourcesFluidsSwabs
  inlined: true
  inlined_as_list: true
mimag_microbial_mat_biofilm_data:
  description: Data that comply with Mimag combined with MicrobialMatBiofilm
  title: MimagMicrobialMatBiofilm data
  domain: MixsCompliantData
  slot_uri: MIXS:mimag_microbial_mat_biofilm_data
  multivalued: true
  range: MimagMicrobialMatBiofilm
  inlined: true
  inlined_as_list: true
mimag_miscellaneous_natural_or_artificial_environment_data:
  description: Data that comply with Mimag combined with MiscellaneousNaturalOrArtificialEnvironment
  title: MimagMiscellaneousNaturalOrArtificialEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:mimag_miscellaneous_natural_or_artificial_environment_data
  multivalued: true
  range: MimagMiscellaneousNaturalOrArtificialEnvironment
  inlined: true
  inlined_as_list: true
mimag_plant_associated_data:
  description: Data that comply with Mimag combined with PlantAssociated
  title: MimagPlantAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:mimag_plant_associated_data
  multivalued: true
  range: MimagPlantAssociated
  inlined: true
  inlined_as_list: true
mimag_sediment_data:
  description: Data that comply with Mimag combined with Sediment
  title: MimagSediment data
  domain: MixsCompliantData
  slot_uri: MIXS:mimag_sediment_data
  multivalued: true
  range: MimagSediment
  inlined: true
  inlined_as_list: true
mimag_soil_data:
  description: Data that comply with Mimag combined with Soil
  title: MimagSoil data
  domain: MixsCompliantData
  slot_uri: MIXS:mimag_soil_data
  multivalued: true
  range: MimagSoil
  inlined: true
  inlined_as_list: true
mimag_symbiont_associated_data:
  description: Data that comply with Mimag combined with SymbiontAssociated
  title: MimagSymbiontAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:mimag_symbiont_associated_data
  multivalued: true
  range: MimagSymbiontAssociated
  inlined: true
  inlined_as_list: true
mimag_wastewater_sludge_data:
  description: Data that comply with Mimag combined with WastewaterSludge
  title: MimagWastewaterSludge data
  domain: MixsCompliantData
  slot_uri: MIXS:mimag_wastewater_sludge_data
  multivalued: true
  range: MimagWastewaterSludge
  inlined: true
  inlined_as_list: true
mimag_water_data:
  description: Data that comply with Mimag combined with Water
  title: MimagWater data
  domain: MixsCompliantData
  slot_uri: MIXS:mimag_water_data
  multivalued: true
  range: MimagWater
  inlined: true
  inlined_as_list: true
mimarks_c_data:
  description: Data that comply with checklist MimarksC
  title: MimarksC data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_c_data
  multivalued: true
  range: MimarksC
  inlined: true
  inlined_as_list: true
mimarks_c_agriculture_data:
  description: Data that comply with MimarksC combined with Agriculture
  title: MimarksCAgriculture data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_c_agriculture_data
  multivalued: true
  range: MimarksCAgriculture
  inlined: true
  inlined_as_list: true
mimarks_c_air_data:
  description: Data that comply with MimarksC combined with Air
  title: MimarksCAir data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_c_air_data
  multivalued: true
  range: MimarksCAir
  inlined: true
  inlined_as_list: true
mimarks_c_built_environment_data:
  description: Data that comply with MimarksC combined with BuiltEnvironment
  title: MimarksCBuiltEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_c_built_environment_data
  multivalued: true
  range: MimarksCBuiltEnvironment
  inlined: true
  inlined_as_list: true
mimarks_c_food_animal_and_animal_feed_data:
  description: Data that comply with MimarksC combined with FoodAnimalAndAnimalFeed
  title: MimarksCFoodAnimalAndAnimalFeed data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_c_food_animal_and_animal_feed_data
  multivalued: true
  range: MimarksCFoodAnimalAndAnimalFeed
  inlined: true
  inlined_as_list: true
mimarks_c_food_farm_environment_data:
  description: Data that comply with MimarksC combined with FoodFarmEnvironment
  title: MimarksCFoodFarmEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_c_food_farm_environment_data
  multivalued: true
  range: MimarksCFoodFarmEnvironment
  inlined: true
  inlined_as_list: true
mimarks_c_food_food_production_facility_data:
  description: Data that comply with MimarksC combined with FoodFoodProductionFacility
  title: MimarksCFoodFoodProductionFacility data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_c_food_food_production_facility_data
  multivalued: true
  range: MimarksCFoodFoodProductionFacility
  inlined: true
  inlined_as_list: true
mimarks_c_food_human_foods_data:
  description: Data that comply with MimarksC combined with FoodHumanFoods
  title: MimarksCFoodHumanFoods data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_c_food_human_foods_data
  multivalued: true
  range: MimarksCFoodHumanFoods
  inlined: true
  inlined_as_list: true
mimarks_c_host_associated_data:
  description: Data that comply with MimarksC combined with HostAssociated
  title: MimarksCHostAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_c_host_associated_data
  multivalued: true
  range: MimarksCHostAssociated
  inlined: true
  inlined_as_list: true
mimarks_c_human_associated_data:
  description: Data that comply with MimarksC combined with HumanAssociated
  title: MimarksCHumanAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_c_human_associated_data
  multivalued: true
  range: MimarksCHumanAssociated
  inlined: true
  inlined_as_list: true
mimarks_c_human_gut_data:
  description: Data that comply with MimarksC combined with HumanGut
  title: MimarksCHumanGut data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_c_human_gut_data
  multivalued: true
  range: MimarksCHumanGut
  inlined: true
  inlined_as_list: true
mimarks_c_human_oral_data:
  description: Data that comply with MimarksC combined with HumanOral
  title: MimarksCHumanOral data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_c_human_oral_data
  multivalued: true
  range: MimarksCHumanOral
  inlined: true
  inlined_as_list: true
mimarks_c_human_skin_data:
  description: Data that comply with MimarksC combined with HumanSkin
  title: MimarksCHumanSkin data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_c_human_skin_data
  multivalued: true
  range: MimarksCHumanSkin
  inlined: true
  inlined_as_list: true
mimarks_c_human_vaginal_data:
  description: Data that comply with MimarksC combined with HumanVaginal
  title: MimarksCHumanVaginal data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_c_human_vaginal_data
  multivalued: true
  range: MimarksCHumanVaginal
  inlined: true
  inlined_as_list: true
mimarks_c_hydrocarbon_resources_cores_data:
  description: Data that comply with MimarksC combined with HydrocarbonResourcesCores
  title: MimarksCHydrocarbonResourcesCores data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_c_hydrocarbon_resources_cores_data
  multivalued: true
  range: MimarksCHydrocarbonResourcesCores
  inlined: true
  inlined_as_list: true
mimarks_c_hydrocarbon_resources_fluids_swabs_data:
  description: Data that comply with MimarksC combined with HydrocarbonResourcesFluidsSwabs
  title: MimarksCHydrocarbonResourcesFluidsSwabs data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_c_hydrocarbon_resources_fluids_swabs_data
  multivalued: true
  range: MimarksCHydrocarbonResourcesFluidsSwabs
  inlined: true
  inlined_as_list: true
mimarks_c_microbial_mat_biofilm_data:
  description: Data that comply with MimarksC combined with MicrobialMatBiofilm
  title: MimarksCMicrobialMatBiofilm data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_c_microbial_mat_biofilm_data
  multivalued: true
  range: MimarksCMicrobialMatBiofilm
  inlined: true
  inlined_as_list: true
mimarks_c_miscellaneous_natural_or_artificial_environment_data:
  description: Data that comply with MimarksC combined with MiscellaneousNaturalOrArtificialEnvironment
  title: MimarksCMiscellaneousNaturalOrArtificialEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_c_miscellaneous_natural_or_artificial_environment_data
  multivalued: true
  range: MimarksCMiscellaneousNaturalOrArtificialEnvironment
  inlined: true
  inlined_as_list: true
mimarks_c_plant_associated_data:
  description: Data that comply with MimarksC combined with PlantAssociated
  title: MimarksCPlantAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_c_plant_associated_data
  multivalued: true
  range: MimarksCPlantAssociated
  inlined: true
  inlined_as_list: true
mimarks_c_sediment_data:
  description: Data that comply with MimarksC combined with Sediment
  title: MimarksCSediment data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_c_sediment_data
  multivalued: true
  range: MimarksCSediment
  inlined: true
  inlined_as_list: true
mimarks_c_soil_data:
  description: Data that comply with MimarksC combined with Soil
  title: MimarksCSoil data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_c_soil_data
  multivalued: true
  range: MimarksCSoil
  inlined: true
  inlined_as_list: true
mimarks_c_symbiont_associated_data:
  description: Data that comply with MimarksC combined with SymbiontAssociated
  title: MimarksCSymbiontAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_c_symbiont_associated_data
  multivalued: true
  range: MimarksCSymbiontAssociated
  inlined: true
  inlined_as_list: true
mimarks_c_wastewater_sludge_data:
  description: Data that comply with MimarksC combined with WastewaterSludge
  title: MimarksCWastewaterSludge data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_c_wastewater_sludge_data
  multivalued: true
  range: MimarksCWastewaterSludge
  inlined: true
  inlined_as_list: true
mimarks_c_water_data:
  description: Data that comply with MimarksC combined with Water
  title: MimarksCWater data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_c_water_data
  multivalued: true
  range: MimarksCWater
  inlined: true
  inlined_as_list: true
mimarks_s_data:
  description: Data that comply with checklist MimarksS
  title: MimarksS data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_s_data
  multivalued: true
  range: MimarksS
  inlined: true
  inlined_as_list: true
mimarks_s_agriculture_data:
  description: Data that comply with MimarksS combined with Agriculture
  title: MimarksSAgriculture data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_s_agriculture_data
  multivalued: true
  range: MimarksSAgriculture
  inlined: true
  inlined_as_list: true
mimarks_s_air_data:
  description: Data that comply with MimarksS combined with Air
  title: MimarksSAir data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_s_air_data
  multivalued: true
  range: MimarksSAir
  inlined: true
  inlined_as_list: true
mimarks_s_built_environment_data:
  description: Data that comply with MimarksS combined with BuiltEnvironment
  title: MimarksSBuiltEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_s_built_environment_data
  multivalued: true
  range: MimarksSBuiltEnvironment
  inlined: true
  inlined_as_list: true
mimarks_s_food_animal_and_animal_feed_data:
  description: Data that comply with MimarksS combined with FoodAnimalAndAnimalFeed
  title: MimarksSFoodAnimalAndAnimalFeed data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_s_food_animal_and_animal_feed_data
  multivalued: true
  range: MimarksSFoodAnimalAndAnimalFeed
  inlined: true
  inlined_as_list: true
mimarks_s_food_farm_environment_data:
  description: Data that comply with MimarksS combined with FoodFarmEnvironment
  title: MimarksSFoodFarmEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_s_food_farm_environment_data
  multivalued: true
  range: MimarksSFoodFarmEnvironment
  inlined: true
  inlined_as_list: true
mimarks_s_food_food_production_facility_data:
  description: Data that comply with MimarksS combined with FoodFoodProductionFacility
  title: MimarksSFoodFoodProductionFacility data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_s_food_food_production_facility_data
  multivalued: true
  range: MimarksSFoodFoodProductionFacility
  inlined: true
  inlined_as_list: true
mimarks_s_food_human_foods_data:
  description: Data that comply with MimarksS combined with FoodHumanFoods
  title: MimarksSFoodHumanFoods data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_s_food_human_foods_data
  multivalued: true
  range: MimarksSFoodHumanFoods
  inlined: true
  inlined_as_list: true
mimarks_s_host_associated_data:
  description: Data that comply with MimarksS combined with HostAssociated
  title: MimarksSHostAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_s_host_associated_data
  multivalued: true
  range: MimarksSHostAssociated
  inlined: true
  inlined_as_list: true
mimarks_s_human_associated_data:
  description: Data that comply with MimarksS combined with HumanAssociated
  title: MimarksSHumanAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_s_human_associated_data
  multivalued: true
  range: MimarksSHumanAssociated
  inlined: true
  inlined_as_list: true
mimarks_s_human_gut_data:
  description: Data that comply with MimarksS combined with HumanGut
  title: MimarksSHumanGut data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_s_human_gut_data
  multivalued: true
  range: MimarksSHumanGut
  inlined: true
  inlined_as_list: true
mimarks_s_human_oral_data:
  description: Data that comply with MimarksS combined with HumanOral
  title: MimarksSHumanOral data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_s_human_oral_data
  multivalued: true
  range: MimarksSHumanOral
  inlined: true
  inlined_as_list: true
mimarks_s_human_skin_data:
  description: Data that comply with MimarksS combined with HumanSkin
  title: MimarksSHumanSkin data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_s_human_skin_data
  multivalued: true
  range: MimarksSHumanSkin
  inlined: true
  inlined_as_list: true
mimarks_s_human_vaginal_data:
  description: Data that comply with MimarksS combined with HumanVaginal
  title: MimarksSHumanVaginal data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_s_human_vaginal_data
  multivalued: true
  range: MimarksSHumanVaginal
  inlined: true
  inlined_as_list: true
mimarks_s_hydrocarbon_resources_cores_data:
  description: Data that comply with MimarksS combined with HydrocarbonResourcesCores
  title: MimarksSHydrocarbonResourcesCores data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_s_hydrocarbon_resources_cores_data
  multivalued: true
  range: MimarksSHydrocarbonResourcesCores
  inlined: true
  inlined_as_list: true
mimarks_s_hydrocarbon_resources_fluids_swabs_data:
  description: Data that comply with MimarksS combined with HydrocarbonResourcesFluidsSwabs
  title: MimarksSHydrocarbonResourcesFluidsSwabs data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_s_hydrocarbon_resources_fluids_swabs_data
  multivalued: true
  range: MimarksSHydrocarbonResourcesFluidsSwabs
  inlined: true
  inlined_as_list: true
mimarks_s_microbial_mat_biofilm_data:
  description: Data that comply with MimarksS combined with MicrobialMatBiofilm
  title: MimarksSMicrobialMatBiofilm data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_s_microbial_mat_biofilm_data
  multivalued: true
  range: MimarksSMicrobialMatBiofilm
  inlined: true
  inlined_as_list: true
mimarks_s_miscellaneous_natural_or_artificial_environment_data:
  description: Data that comply with MimarksS combined with MiscellaneousNaturalOrArtificialEnvironment
  title: MimarksSMiscellaneousNaturalOrArtificialEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_s_miscellaneous_natural_or_artificial_environment_data
  multivalued: true
  range: MimarksSMiscellaneousNaturalOrArtificialEnvironment
  inlined: true
  inlined_as_list: true
mimarks_s_plant_associated_data:
  description: Data that comply with MimarksS combined with PlantAssociated
  title: MimarksSPlantAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_s_plant_associated_data
  multivalued: true
  range: MimarksSPlantAssociated
  inlined: true
  inlined_as_list: true
mimarks_s_sediment_data:
  description: Data that comply with MimarksS combined with Sediment
  title: MimarksSSediment data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_s_sediment_data
  multivalued: true
  range: MimarksSSediment
  inlined: true
  inlined_as_list: true
mimarks_s_soil_data:
  description: Data that comply with MimarksS combined with Soil
  title: MimarksSSoil data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_s_soil_data
  multivalued: true
  range: MimarksSSoil
  inlined: true
  inlined_as_list: true
mimarks_s_symbiont_associated_data:
  description: Data that comply with MimarksS combined with SymbiontAssociated
  title: MimarksSSymbiontAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_s_symbiont_associated_data
  multivalued: true
  range: MimarksSSymbiontAssociated
  inlined: true
  inlined_as_list: true
mimarks_s_wastewater_sludge_data:
  description: Data that comply with MimarksS combined with WastewaterSludge
  title: MimarksSWastewaterSludge data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_s_wastewater_sludge_data
  multivalued: true
  range: MimarksSWastewaterSludge
  inlined: true
  inlined_as_list: true
mimarks_s_water_data:
  description: Data that comply with MimarksS combined with Water
  title: MimarksSWater data
  domain: MixsCompliantData
  slot_uri: MIXS:mimarks_s_water_data
  multivalued: true
  range: MimarksSWater
  inlined: true
  inlined_as_list: true
mims_data:
  description: Data that comply with checklist Mims
  title: Mims data
  domain: MixsCompliantData
  slot_uri: MIXS:mims_data
  multivalued: true
  range: Mims
  inlined: true
  inlined_as_list: true
mims_agriculture_data:
  description: Data that comply with Mims combined with Agriculture
  title: MimsAgriculture data
  domain: MixsCompliantData
  slot_uri: MIXS:mims_agriculture_data
  multivalued: true
  range: MimsAgriculture
  inlined: true
  inlined_as_list: true
mims_air_data:
  description: Data that comply with Mims combined with Air
  title: MimsAir data
  domain: MixsCompliantData
  slot_uri: MIXS:mims_air_data
  multivalued: true
  range: MimsAir
  inlined: true
  inlined_as_list: true
mims_built_environment_data:
  description: Data that comply with Mims combined with BuiltEnvironment
  title: MimsBuiltEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:mims_built_environment_data
  multivalued: true
  range: MimsBuiltEnvironment
  inlined: true
  inlined_as_list: true
mims_food_animal_and_animal_feed_data:
  description: Data that comply with Mims combined with FoodAnimalAndAnimalFeed
  title: MimsFoodAnimalAndAnimalFeed data
  domain: MixsCompliantData
  slot_uri: MIXS:mims_food_animal_and_animal_feed_data
  multivalued: true
  range: MimsFoodAnimalAndAnimalFeed
  inlined: true
  inlined_as_list: true
mims_food_farm_environment_data:
  description: Data that comply with Mims combined with FoodFarmEnvironment
  title: MimsFoodFarmEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:mims_food_farm_environment_data
  multivalued: true
  range: MimsFoodFarmEnvironment
  inlined: true
  inlined_as_list: true
mims_food_food_production_facility_data:
  description: Data that comply with Mims combined with FoodFoodProductionFacility
  title: MimsFoodFoodProductionFacility data
  domain: MixsCompliantData
  slot_uri: MIXS:mims_food_food_production_facility_data
  multivalued: true
  range: MimsFoodFoodProductionFacility
  inlined: true
  inlined_as_list: true
mims_food_human_foods_data:
  description: Data that comply with Mims combined with FoodHumanFoods
  title: MimsFoodHumanFoods data
  domain: MixsCompliantData
  slot_uri: MIXS:mims_food_human_foods_data
  multivalued: true
  range: MimsFoodHumanFoods
  inlined: true
  inlined_as_list: true
mims_host_associated_data:
  description: Data that comply with Mims combined with HostAssociated
  title: MimsHostAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:mims_host_associated_data
  multivalued: true
  range: MimsHostAssociated
  inlined: true
  inlined_as_list: true
mims_human_associated_data:
  description: Data that comply with Mims combined with HumanAssociated
  title: MimsHumanAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:mims_human_associated_data
  multivalued: true
  range: MimsHumanAssociated
  inlined: true
  inlined_as_list: true
mims_human_gut_data:
  description: Data that comply with Mims combined with HumanGut
  title: MimsHumanGut data
  domain: MixsCompliantData
  slot_uri: MIXS:mims_human_gut_data
  multivalued: true
  range: MimsHumanGut
  inlined: true
  inlined_as_list: true
mims_human_oral_data:
  description: Data that comply with Mims combined with HumanOral
  title: MimsHumanOral data
  domain: MixsCompliantData
  slot_uri: MIXS:mims_human_oral_data
  multivalued: true
  range: MimsHumanOral
  inlined: true
  inlined_as_list: true
mims_human_skin_data:
  description: Data that comply with Mims combined with HumanSkin
  title: MimsHumanSkin data
  domain: MixsCompliantData
  slot_uri: MIXS:mims_human_skin_data
  multivalued: true
  range: MimsHumanSkin
  inlined: true
  inlined_as_list: true
mims_human_vaginal_data:
  description: Data that comply with Mims combined with HumanVaginal
  title: MimsHumanVaginal data
  domain: MixsCompliantData
  slot_uri: MIXS:mims_human_vaginal_data
  multivalued: true
  range: MimsHumanVaginal
  inlined: true
  inlined_as_list: true
mims_hydrocarbon_resources_cores_data:
  description: Data that comply with Mims combined with HydrocarbonResourcesCores
  title: MimsHydrocarbonResourcesCores data
  domain: MixsCompliantData
  slot_uri: MIXS:mims_hydrocarbon_resources_cores_data
  multivalued: true
  range: MimsHydrocarbonResourcesCores
  inlined: true
  inlined_as_list: true
mims_hydrocarbon_resources_fluids_swabs_data:
  description: Data that comply with Mims combined with HydrocarbonResourcesFluidsSwabs
  title: MimsHydrocarbonResourcesFluidsSwabs data
  domain: MixsCompliantData
  slot_uri: MIXS:mims_hydrocarbon_resources_fluids_swabs_data
  multivalued: true
  range: MimsHydrocarbonResourcesFluidsSwabs
  inlined: true
  inlined_as_list: true
mims_microbial_mat_biofilm_data:
  description: Data that comply with Mims combined with MicrobialMatBiofilm
  title: MimsMicrobialMatBiofilm data
  domain: MixsCompliantData
  slot_uri: MIXS:mims_microbial_mat_biofilm_data
  multivalued: true
  range: MimsMicrobialMatBiofilm
  inlined: true
  inlined_as_list: true
mims_miscellaneous_natural_or_artificial_environment_data:
  description: Data that comply with Mims combined with MiscellaneousNaturalOrArtificialEnvironment
  title: MimsMiscellaneousNaturalOrArtificialEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:mims_miscellaneous_natural_or_artificial_environment_data
  multivalued: true
  range: MimsMiscellaneousNaturalOrArtificialEnvironment
  inlined: true
  inlined_as_list: true
mims_plant_associated_data:
  description: Data that comply with Mims combined with PlantAssociated
  title: MimsPlantAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:mims_plant_associated_data
  multivalued: true
  range: MimsPlantAssociated
  inlined: true
  inlined_as_list: true
mims_sediment_data:
  description: Data that comply with Mims combined with Sediment
  title: MimsSediment data
  domain: MixsCompliantData
  slot_uri: MIXS:mims_sediment_data
  multivalued: true
  range: MimsSediment
  inlined: true
  inlined_as_list: true
mims_soil_data:
  description: Data that comply with Mims combined with Soil
  title: MimsSoil data
  domain: MixsCompliantData
  slot_uri: MIXS:mims_soil_data
  multivalued: true
  range: MimsSoil
  inlined: true
  inlined_as_list: true
mims_symbiont_associated_data:
  description: Data that comply with Mims combined with SymbiontAssociated
  title: MimsSymbiontAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:mims_symbiont_associated_data
  multivalued: true
  range: MimsSymbiontAssociated
  inlined: true
  inlined_as_list: true
mims_wastewater_sludge_data:
  description: Data that comply with Mims combined with WastewaterSludge
  title: MimsWastewaterSludge data
  domain: MixsCompliantData
  slot_uri: MIXS:mims_wastewater_sludge_data
  multivalued: true
  range: MimsWastewaterSludge
  inlined: true
  inlined_as_list: true
mims_water_data:
  description: Data that comply with Mims combined with Water
  title: MimsWater data
  domain: MixsCompliantData
  slot_uri: MIXS:mims_water_data
  multivalued: true
  range: MimsWater
  inlined: true
  inlined_as_list: true
misag_data:
  description: Data that comply with checklist Misag
  title: Misag data
  domain: MixsCompliantData
  slot_uri: MIXS:misag_data
  multivalued: true
  range: Misag
  inlined: true
  inlined_as_list: true
misag_agriculture_data:
  description: Data that comply with Misag combined with Agriculture
  title: MisagAgriculture data
  domain: MixsCompliantData
  slot_uri: MIXS:misag_agriculture_data
  multivalued: true
  range: MisagAgriculture
  inlined: true
  inlined_as_list: true
misag_air_data:
  description: Data that comply with Misag combined with Air
  title: MisagAir data
  domain: MixsCompliantData
  slot_uri: MIXS:misag_air_data
  multivalued: true
  range: MisagAir
  inlined: true
  inlined_as_list: true
misag_built_environment_data:
  description: Data that comply with Misag combined with BuiltEnvironment
  title: MisagBuiltEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:misag_built_environment_data
  multivalued: true
  range: MisagBuiltEnvironment
  inlined: true
  inlined_as_list: true
misag_food_animal_and_animal_feed_data:
  description: Data that comply with Misag combined with FoodAnimalAndAnimalFeed
  title: MisagFoodAnimalAndAnimalFeed data
  domain: MixsCompliantData
  slot_uri: MIXS:misag_food_animal_and_animal_feed_data
  multivalued: true
  range: MisagFoodAnimalAndAnimalFeed
  inlined: true
  inlined_as_list: true
misag_food_farm_environment_data:
  description: Data that comply with Misag combined with FoodFarmEnvironment
  title: MisagFoodFarmEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:misag_food_farm_environment_data
  multivalued: true
  range: MisagFoodFarmEnvironment
  inlined: true
  inlined_as_list: true
misag_food_food_production_facility_data:
  description: Data that comply with Misag combined with FoodFoodProductionFacility
  title: MisagFoodFoodProductionFacility data
  domain: MixsCompliantData
  slot_uri: MIXS:misag_food_food_production_facility_data
  multivalued: true
  range: MisagFoodFoodProductionFacility
  inlined: true
  inlined_as_list: true
misag_food_human_foods_data:
  description: Data that comply with Misag combined with FoodHumanFoods
  title: MisagFoodHumanFoods data
  domain: MixsCompliantData
  slot_uri: MIXS:misag_food_human_foods_data
  multivalued: true
  range: MisagFoodHumanFoods
  inlined: true
  inlined_as_list: true
misag_host_associated_data:
  description: Data that comply with Misag combined with HostAssociated
  title: MisagHostAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:misag_host_associated_data
  multivalued: true
  range: MisagHostAssociated
  inlined: true
  inlined_as_list: true
misag_human_associated_data:
  description: Data that comply with Misag combined with HumanAssociated
  title: MisagHumanAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:misag_human_associated_data
  multivalued: true
  range: MisagHumanAssociated
  inlined: true
  inlined_as_list: true
misag_human_gut_data:
  description: Data that comply with Misag combined with HumanGut
  title: MisagHumanGut data
  domain: MixsCompliantData
  slot_uri: MIXS:misag_human_gut_data
  multivalued: true
  range: MisagHumanGut
  inlined: true
  inlined_as_list: true
misag_human_oral_data:
  description: Data that comply with Misag combined with HumanOral
  title: MisagHumanOral data
  domain: MixsCompliantData
  slot_uri: MIXS:misag_human_oral_data
  multivalued: true
  range: MisagHumanOral
  inlined: true
  inlined_as_list: true
misag_human_skin_data:
  description: Data that comply with Misag combined with HumanSkin
  title: MisagHumanSkin data
  domain: MixsCompliantData
  slot_uri: MIXS:misag_human_skin_data
  multivalued: true
  range: MisagHumanSkin
  inlined: true
  inlined_as_list: true
misag_human_vaginal_data:
  description: Data that comply with Misag combined with HumanVaginal
  title: MisagHumanVaginal data
  domain: MixsCompliantData
  slot_uri: MIXS:misag_human_vaginal_data
  multivalued: true
  range: MisagHumanVaginal
  inlined: true
  inlined_as_list: true
misag_hydrocarbon_resources_cores_data:
  description: Data that comply with Misag combined with HydrocarbonResourcesCores
  title: MisagHydrocarbonResourcesCores data
  domain: MixsCompliantData
  slot_uri: MIXS:misag_hydrocarbon_resources_cores_data
  multivalued: true
  range: MisagHydrocarbonResourcesCores
  inlined: true
  inlined_as_list: true
misag_hydrocarbon_resources_fluids_swabs_data:
  description: Data that comply with Misag combined with HydrocarbonResourcesFluidsSwabs
  title: MisagHydrocarbonResourcesFluidsSwabs data
  domain: MixsCompliantData
  slot_uri: MIXS:misag_hydrocarbon_resources_fluids_swabs_data
  multivalued: true
  range: MisagHydrocarbonResourcesFluidsSwabs
  inlined: true
  inlined_as_list: true
misag_microbial_mat_biofilm_data:
  description: Data that comply with Misag combined with MicrobialMatBiofilm
  title: MisagMicrobialMatBiofilm data
  domain: MixsCompliantData
  slot_uri: MIXS:misag_microbial_mat_biofilm_data
  multivalued: true
  range: MisagMicrobialMatBiofilm
  inlined: true
  inlined_as_list: true
misag_miscellaneous_natural_or_artificial_environment_data:
  description: Data that comply with Misag combined with MiscellaneousNaturalOrArtificialEnvironment
  title: MisagMiscellaneousNaturalOrArtificialEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:misag_miscellaneous_natural_or_artificial_environment_data
  multivalued: true
  range: MisagMiscellaneousNaturalOrArtificialEnvironment
  inlined: true
  inlined_as_list: true
misag_plant_associated_data:
  description: Data that comply with Misag combined with PlantAssociated
  title: MisagPlantAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:misag_plant_associated_data
  multivalued: true
  range: MisagPlantAssociated
  inlined: true
  inlined_as_list: true
misag_sediment_data:
  description: Data that comply with Misag combined with Sediment
  title: MisagSediment data
  domain: MixsCompliantData
  slot_uri: MIXS:misag_sediment_data
  multivalued: true
  range: MisagSediment
  inlined: true
  inlined_as_list: true
misag_soil_data:
  description: Data that comply with Misag combined with Soil
  title: MisagSoil data
  domain: MixsCompliantData
  slot_uri: MIXS:misag_soil_data
  multivalued: true
  range: MisagSoil
  inlined: true
  inlined_as_list: true
misag_symbiont_associated_data:
  description: Data that comply with Misag combined with SymbiontAssociated
  title: MisagSymbiontAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:misag_symbiont_associated_data
  multivalued: true
  range: MisagSymbiontAssociated
  inlined: true
  inlined_as_list: true
misag_wastewater_sludge_data:
  description: Data that comply with Misag combined with WastewaterSludge
  title: MisagWastewaterSludge data
  domain: MixsCompliantData
  slot_uri: MIXS:misag_wastewater_sludge_data
  multivalued: true
  range: MisagWastewaterSludge
  inlined: true
  inlined_as_list: true
misag_water_data:
  description: Data that comply with Misag combined with Water
  title: MisagWater data
  domain: MixsCompliantData
  slot_uri: MIXS:misag_water_data
  multivalued: true
  range: MisagWater
  inlined: true
  inlined_as_list: true
miuvig_data:
  description: Data that comply with checklist Miuvig
  title: Miuvig data
  domain: MixsCompliantData
  slot_uri: MIXS:miuvig_data
  multivalued: true
  range: Miuvig
  inlined: true
  inlined_as_list: true
miuvig_agriculture_data:
  description: Data that comply with Miuvig combined with Agriculture
  title: MiuvigAgriculture data
  domain: MixsCompliantData
  slot_uri: MIXS:miuvig_agriculture_data
  multivalued: true
  range: MiuvigAgriculture
  inlined: true
  inlined_as_list: true
miuvig_air_data:
  description: Data that comply with Miuvig combined with Air
  title: MiuvigAir data
  domain: MixsCompliantData
  slot_uri: MIXS:miuvig_air_data
  multivalued: true
  range: MiuvigAir
  inlined: true
  inlined_as_list: true
miuvig_built_environment_data:
  description: Data that comply with Miuvig combined with BuiltEnvironment
  title: MiuvigBuiltEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:miuvig_built_environment_data
  multivalued: true
  range: MiuvigBuiltEnvironment
  inlined: true
  inlined_as_list: true
miuvig_food_animal_and_animal_feed_data:
  description: Data that comply with Miuvig combined with FoodAnimalAndAnimalFeed
  title: MiuvigFoodAnimalAndAnimalFeed data
  domain: MixsCompliantData
  slot_uri: MIXS:miuvig_food_animal_and_animal_feed_data
  multivalued: true
  range: MiuvigFoodAnimalAndAnimalFeed
  inlined: true
  inlined_as_list: true
miuvig_food_farm_environment_data:
  description: Data that comply with Miuvig combined with FoodFarmEnvironment
  title: MiuvigFoodFarmEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:miuvig_food_farm_environment_data
  multivalued: true
  range: MiuvigFoodFarmEnvironment
  inlined: true
  inlined_as_list: true
miuvig_food_food_production_facility_data:
  description: Data that comply with Miuvig combined with FoodFoodProductionFacility
  title: MiuvigFoodFoodProductionFacility data
  domain: MixsCompliantData
  slot_uri: MIXS:miuvig_food_food_production_facility_data
  multivalued: true
  range: MiuvigFoodFoodProductionFacility
  inlined: true
  inlined_as_list: true
miuvig_food_human_foods_data:
  description: Data that comply with Miuvig combined with FoodHumanFoods
  title: MiuvigFoodHumanFoods data
  domain: MixsCompliantData
  slot_uri: MIXS:miuvig_food_human_foods_data
  multivalued: true
  range: MiuvigFoodHumanFoods
  inlined: true
  inlined_as_list: true
miuvig_host_associated_data:
  description: Data that comply with Miuvig combined with HostAssociated
  title: MiuvigHostAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:miuvig_host_associated_data
  multivalued: true
  range: MiuvigHostAssociated
  inlined: true
  inlined_as_list: true
miuvig_human_associated_data:
  description: Data that comply with Miuvig combined with HumanAssociated
  title: MiuvigHumanAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:miuvig_human_associated_data
  multivalued: true
  range: MiuvigHumanAssociated
  inlined: true
  inlined_as_list: true
miuvig_human_gut_data:
  description: Data that comply with Miuvig combined with HumanGut
  title: MiuvigHumanGut data
  domain: MixsCompliantData
  slot_uri: MIXS:miuvig_human_gut_data
  multivalued: true
  range: MiuvigHumanGut
  inlined: true
  inlined_as_list: true
miuvig_human_oral_data:
  description: Data that comply with Miuvig combined with HumanOral
  title: MiuvigHumanOral data
  domain: MixsCompliantData
  slot_uri: MIXS:miuvig_human_oral_data
  multivalued: true
  range: MiuvigHumanOral
  inlined: true
  inlined_as_list: true
miuvig_human_skin_data:
  description: Data that comply with Miuvig combined with HumanSkin
  title: MiuvigHumanSkin data
  domain: MixsCompliantData
  slot_uri: MIXS:miuvig_human_skin_data
  multivalued: true
  range: MiuvigHumanSkin
  inlined: true
  inlined_as_list: true
miuvig_human_vaginal_data:
  description: Data that comply with Miuvig combined with HumanVaginal
  title: MiuvigHumanVaginal data
  domain: MixsCompliantData
  slot_uri: MIXS:miuvig_human_vaginal_data
  multivalued: true
  range: MiuvigHumanVaginal
  inlined: true
  inlined_as_list: true
miuvig_hydrocarbon_resources_cores_data:
  description: Data that comply with Miuvig combined with HydrocarbonResourcesCores
  title: MiuvigHydrocarbonResourcesCores data
  domain: MixsCompliantData
  slot_uri: MIXS:miuvig_hydrocarbon_resources_cores_data
  multivalued: true
  range: MiuvigHydrocarbonResourcesCores
  inlined: true
  inlined_as_list: true
miuvig_hydrocarbon_resources_fluids_swabs_data:
  description: Data that comply with Miuvig combined with HydrocarbonResourcesFluidsSwabs
  title: MiuvigHydrocarbonResourcesFluidsSwabs data
  domain: MixsCompliantData
  slot_uri: MIXS:miuvig_hydrocarbon_resources_fluids_swabs_data
  multivalued: true
  range: MiuvigHydrocarbonResourcesFluidsSwabs
  inlined: true
  inlined_as_list: true
miuvig_microbial_mat_biofilm_data:
  description: Data that comply with Miuvig combined with MicrobialMatBiofilm
  title: MiuvigMicrobialMatBiofilm data
  domain: MixsCompliantData
  slot_uri: MIXS:miuvig_microbial_mat_biofilm_data
  multivalued: true
  range: MiuvigMicrobialMatBiofilm
  inlined: true
  inlined_as_list: true
miuvig_miscellaneous_natural_or_artificial_environment_data:
  description: Data that comply with Miuvig combined with MiscellaneousNaturalOrArtificialEnvironment
  title: MiuvigMiscellaneousNaturalOrArtificialEnvironment data
  domain: MixsCompliantData
  slot_uri: MIXS:miuvig_miscellaneous_natural_or_artificial_environment_data
  multivalued: true
  range: MiuvigMiscellaneousNaturalOrArtificialEnvironment
  inlined: true
  inlined_as_list: true
miuvig_plant_associated_data:
  description: Data that comply with Miuvig combined with PlantAssociated
  title: MiuvigPlantAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:miuvig_plant_associated_data
  multivalued: true
  range: MiuvigPlantAssociated
  inlined: true
  inlined_as_list: true
miuvig_sediment_data:
  description: Data that comply with Miuvig combined with Sediment
  title: MiuvigSediment data
  domain: MixsCompliantData
  slot_uri: MIXS:miuvig_sediment_data
  multivalued: true
  range: MiuvigSediment
  inlined: true
  inlined_as_list: true
miuvig_soil_data:
  description: Data that comply with Miuvig combined with Soil
  title: MiuvigSoil data
  domain: MixsCompliantData
  slot_uri: MIXS:miuvig_soil_data
  multivalued: true
  range: MiuvigSoil
  inlined: true
  inlined_as_list: true
miuvig_symbiont_associated_data:
  description: Data that comply with Miuvig combined with SymbiontAssociated
  title: MiuvigSymbiontAssociated data
  domain: MixsCompliantData
  slot_uri: MIXS:miuvig_symbiont_associated_data
  multivalued: true
  range: MiuvigSymbiontAssociated
  inlined: true
  inlined_as_list: true
miuvig_wastewater_sludge_data:
  description: Data that comply with Miuvig combined with WastewaterSludge
  title: MiuvigWastewaterSludge data
  domain: MixsCompliantData
  slot_uri: MIXS:miuvig_wastewater_sludge_data
  multivalued: true
  range: MiuvigWastewaterSludge
  inlined: true
  inlined_as_list: true
miuvig_water_data:
  description: Data that comply with Miuvig combined with Water
  title: MiuvigWater data
  domain: MixsCompliantData
  slot_uri: MIXS:miuvig_water_data
  multivalued: true
  range: MiuvigWater
  inlined: true
  inlined_as_list: true
HACCP_term:
  description: Hazard Analysis Critical Control Points (HACCP) food safety terms;
    This field accepts terms listed under HACCP guide food safety term (http://purl.obolibrary.org/obo/FOODON_03530221)
  title: Hazard Analysis Critical Control Points (HACCP) guide food safety term
  examples:
  - value: tetrodotoxic poisoning [FOODON:03530249]
  keywords:
  - food
  - term
  slot_uri: MIXS:0001215
  multivalued: true
  range: string
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\]$
  structured_pattern:
    syntax: ^{termLabel} \[{termID}\]$
    interpolated: true
    partial_match: true
IFSAC_category:
  annotations:
    Expected_value: IFSAC term
  description: 'The IFSAC food categorization scheme has five distinct levels to which
    foods can be assigned, depending upon the type of food. First, foods are assigned
    to one of four food groups (aquatic animals, land animals, plants, and other).
    Food groups include increasingly specific food categories; dairy, eggs, meat and
    poultry, and game are in the land animal food group, and the category meat and
    poultry is further subdivided into more specific categories of meat (beef, pork,
    other meat) and poultry (chicken, turkey, other poultry). Finally, foods are differentiated
    by differences in food processing (such as pasteurized fluid dairy products, unpasteurized
    fluid dairy products, pasteurized solid and semi-solid dairy products, and unpasteurized
    solid and semi-solid dairy products. An IFSAC food category chart is available
    from https://www.cdc.gov/foodsafety/ifsac/projects/food-categorization-scheme.html
    PMID: 28926300'
  title: Interagency Food Safety Analytics Collaboration (IFSAC) category
  examples:
  - value: Plants:Produce:Vegetables:Herbs:Dried Herbs
  keywords:
  - food
  string_serialization: '{text}'
  slot_uri: MIXS:0001179
  multivalued: true
  required: true
abs_air_humidity:
  annotations:
    Preferred_unit: gram per gram, kilogram per kilogram, kilogram, pound
  description: Actual mass of water vapor - mh20 - present in the air water vapor
    mixture
  title: absolute air humidity
  examples:
  - value: 9 gram per gram
  keywords:
  - absolute
  - air
  - humidity
  slot_uri: MIXS:0000122
  range: string
  required: true
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
adapters:
  annotations:
    Expected_value: adapter A and B sequence
  description: Adapters provide priming sequences for both amplification and sequencing
    of the sample-library fragments. Both adapters should be reported; in uppercase
    letters
  title: adapters
  examples:
  - value: AATGATACGGCGACCACCGAGATCTACACGCT;CAAGCAGAAGACGGCATACGAGAT
  in_subset:
  - sequencing
  string_serialization: '{dna};{dna}'
  slot_uri: MIXS:0000048
add_recov_method:
  annotations:
    Expected_value: enumeration;timestamp
  description: Additional (i.e. Secondary, tertiary, etc.) recovery methods deployed
    for increase of hydrocarbon recovery from resource and start date for each one
    of them. If "other" is specified, please propose entry in "additional info" field
  title: secondary and tertiary recovery methods and start date
  examples:
  - value: Polymer Addition;2018-06-21T14:30Z
  keywords:
  - date
  - method
  - recover
  - secondary
  - start
  string_serialization: '[Water Injection|Dump Flood|Gas Injection|Wag Immiscible
    Injection|Polymer Addition|Surfactant Addition|Not Applicable|other];{timestamp}'
  slot_uri: MIXS:0001009
  required: true
additional_info:
  description: Information that doesn't fit anywhere else. Can also be used to propose
    new entries for fields with controlled vocabulary
  title: additional info
  keywords:
  - information
  slot_uri: MIXS:0000300
  range: string
address:
  annotations:
    Expected_value: value
  description: The street name and building number where the sampling occurred
  title: address
  string_serialization: '{integer}{text}'
  slot_uri: MIXS:0000218
adj_room:
  description: List of rooms (room number, room name) immediately adjacent to the
    sampling room
  title: adjacent rooms
  keywords:
  - adjacent
  - room
  slot_uri: MIXS:0000219
  range: string
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+);[1-9][0-9]*$
  structured_pattern:
    syntax: ^{room_name};{room_number}$
    interpolated: true
    partial_match: true
adjacent_environment:
  annotations:
    Expected_value: ENVO_01001110 or ENVO_00000070
  description: Description of the environmental system or features that are adjacent
    to the sampling site. This field accepts terms under ecosystem (http://purl.obolibrary.org/obo/ENVO_01001110)
    and human construction (http://purl.obolibrary.org/obo/ENVO_00000070). Multiple
    terms can be separated by pipes
  title: environment adjacent to site
  examples:
  - value: estuarine biome [ENVO:01000020]
  keywords:
  - adjacent
  - environment
  - site
  string_serialization: '{termLabel}{[termID]}'
  slot_uri: MIXS:0001121
  multivalued: true
aero_struc:
  description: Aerospace structures typically consist of thin plates with stiffeners
    for the external surfaces, bulkheads and frames to support the shape and fasteners
    such as welds, rivets, screws and bolts to hold the components together
  title: aerospace structure
  examples:
  - value: plane
  slot_uri: MIXS:0000773
  range: AeroStrucEnum
agrochem_addition:
  annotations:
    Expected_value: agrochemical name;agrochemical amount;timestamp
    Preferred_unit: gram, mole per liter, milligram per liter
  description: Addition of fertilizers, pesticides, etc. - amount and time of applications
  title: history/agrochemical additions
  examples:
  - value: roundup;5 milligram per liter;2018-06-21
  keywords:
  - history
  string_serialization: '{text};{float} {unit};{timestamp}'
  slot_uri: MIXS:0000639
  multivalued: true
air_PM_concen:
  annotations:
    Expected_value: particulate matter name;measurement value
  description: Concentration of substances that remain suspended in the air, and comprise
    mixtures of organic and inorganic substances (PM10 and PM2.5); can report multiple
    PM's by entering numeric values preceded by name of PM
  title: air particulate matter concentration
  examples:
  - value: PM2.5;10 microgram per cubic meter
  keywords:
  - air
  - concentration
  - particle
  - particulate
  string_serialization: '{text};{float} {unit}'
  slot_uri: MIXS:0000108
  multivalued: true
air_flow_impede:
  annotations:
    Expected_value: enumeration;obstruction type; distance from sampling device
  description: Presence of objects in the area that would influence or impede air
    flow through the air filter
  title: local air flow impediments
  examples:
  - value: obstructed;hay bales; 2 m
  keywords:
  - air
  string_serialization: '[obstructed|unobstructed]; {text}; {measurement value}'
  slot_uri: MIXS:0001146
  multivalued: true
air_temp:
  annotations:
    Preferred_unit: degree Celsius
  description: Temperature of the air at the time of sampling
  title: air temperature
  keywords:
  - air
  - temperature
  slot_uri: MIXS:0000124
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
air_temp_regm:
  annotations:
    Expected_value: temperature value;treatment interval and duration
    Preferred_unit: meter
  description: Information about treatment involving an exposure to varying temperatures;
    should include the temperature, treatment regimen including how many times the
    treatment was repeated, how long each treatment lasted, and the start and end
    time of the entire treatment; can include different temperature regimens
  title: air temperature regimen
  examples:
  - value: 25 degree Celsius;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M
  keywords:
  - air
  - regimen
  - temperature
  string_serialization: '{float} {unit};{Rn/start_time/end_time/duration}'
  slot_uri: MIXS:0000551
  multivalued: true
al_sat:
  annotations:
    Preferred_unit: percentage
  description: Aluminum saturation (esp. For tropical soils)
  title: extreme_unusual_properties/Al saturation
  keywords:
  - extreme
  - properties
  - saturation
  - unusual
  slot_uri: MIXS:0000607
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
al_sat_meth:
  description: Reference or method used in determining Al saturation
  title: extreme_unusual_properties/Al saturation method
  keywords:
  - extreme
  - method
  - properties
  - saturation
  - unusual
  slot_uri: MIXS:0000324
  range: string
  pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$$
  structured_pattern:
    syntax: ^{PMID}|{DOI}|{URL}$
    interpolated: true
    partial_match: true
alkalinity:
  annotations:
    Preferred_unit: milliequivalent per liter, milligram per liter
  description: Alkalinity, the ability of a solution to neutralize acids to the equivalence
    point of carbonate or bicarbonate
  title: alkalinity
  examples:
  - value: 50 milligram per liter
  keywords:
  - alkalinity
  slot_uri: MIXS:0000421
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
alkalinity_method:
  description: Method used for alkalinity measurement
  title: alkalinity method
  examples:
  - value: titration
  keywords:
  - alkalinity
  - method
  slot_uri: MIXS:0000298
  range: string
alkyl_diethers:
  description: Concentration of alkyl diethers
  title: alkyl diethers
  examples:
  - value: 0.005 mole per liter
  slot_uri: MIXS:0000490
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
alt:
  annotations:
    Preferred_unit: meter
  description: Heights of objects such as airplanes, space shuttles, rockets, atmospheric
    balloons and heights of places such as atmospheric layers and clouds. It is used
    to measure the height of an object which is above the earth's surface. In this
    context, the altitude measurement is the vertical distance between the earth's
    surface above sea level and the sampled position in the air
  title: altitude
  examples:
  - value: 100 meter
  in_subset:
  - environment
  slot_uri: MIXS:0000094
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
aminopept_act:
  annotations:
    Preferred_unit: mole per liter per hour
  description: Measurement of aminopeptidase activity
  title: aminopeptidase activity
  examples:
  - value: 0.269 mole per liter per hour
  slot_uri: MIXS:0000172
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
ammonium:
  annotations:
    Preferred_unit: micromole per liter, milligram per liter, parts per million
  description: Concentration of ammonium in the sample
  title: ammonium
  examples:
  - value: 1.5 milligram per liter
  slot_uri: MIXS:0000427
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
amniotic_fluid_color:
  description: Specification of the color of the amniotic fluid sample
  title: amniotic fluid/color
  slot_uri: MIXS:0000276
  range: string
amount_light:
  annotations:
    Preferred_unit: lux, lumens per square meter
  description: The unit of illuminance and luminous emittance, measuring luminous
    flux per unit area
  title: amount of light
  keywords:
  - light
  slot_uri: MIXS:0000140
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
ances_data:
  description: Information about either pedigree or other ancestral information description
    (e.g. parental variety in case of mutant or selection), e.g. A/3*B (meaning [(A
    x B) x B] x B)
  title: ancestral data
  examples:
  - value: A/3*B
  slot_uri: MIXS:0000247
  range: string
anim_water_method:
  description: Description of the equipment or method used to distribute water to
    livestock. This field accepts termed listed under water delivery equipment (http://opendata.inra.fr/EOL/EOL_0001653).
    Multiple terms can be separated by pipes
  title: animal water delivery method
  examples:
  - value: water trough [EOL:0001618]
  keywords:
  - animal
  - delivery
  - method
  - water
  slot_uri: MIXS:0001115
  multivalued: true
  range: string
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\]$
  structured_pattern:
    syntax: ^{termLabel} \[{termID}\]$
    interpolated: true
    partial_match: true
animal_am:
  description: The name(s) (generic or brand) of the antimicrobial(s) given to the
    food animal within the last 30 days
  title: food animal antimicrobial
  examples:
  - value: tetracycline
  keywords:
  - animal
  - antimicrobial
  - food
  slot_uri: MIXS:0001243
  range: string
animal_am_dur:
  annotations:
    Expected_value: value
  description: The duration of time (days) that the antimicrobial was administered
    to the food animal
  title: food animal antimicrobial duration
  examples:
  - value: 3 days
  keywords:
  - animal
  - antimicrobial
  - duration
  - food
  - period
  string_serialization: '{float} {day}'
  slot_uri: MIXS:0001244
animal_am_freq:
  description: The frequency per day that the antimicrobial was adminstered to the
    food animal
  title: food animal antimicrobial frequency
  examples:
  - value: '1.5'
  keywords:
  - animal
  - antimicrobial
  - food
  - frequency
  slot_uri: MIXS:0001245
  range: float
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
animal_am_route:
  description: The route by which the antimicrobial is adminstered into the body of
    the food animal
  title: food animal antimicrobial route of administration
  examples:
  - value: oral-feed
  keywords:
  - administration
  - animal
  - antimicrobial
  - food
  - route
  slot_uri: MIXS:0001246
  range: string
animal_am_use:
  description: The prescribed intended use of or the condition treated by the antimicrobial
    given to the food animal by any route of administration
  title: food animal antimicrobial intended use
  examples:
  - value: shipping fever
  keywords:
  - animal
  - antimicrobial
  - food
  - use
  slot_uri: MIXS:0001247
  range: string
animal_body_cond:
  description: Body condition scoring is a production management tool used to evaluate
    overall health and nutritional needs of a food animal. Because there are different
    scoring systems, this field is restricted to three categories
  title: food animal body condition
  examples:
  - value: under conditioned
  keywords:
  - animal
  - body
  - condition
  - food
  slot_uri: MIXS:0001248
  range: AnimalBodyCondEnum
animal_diet:
  annotations:
    Expected_value: text or FOODON_03309997
  description: If the isolate is from a food animal, the type of diet eaten by the
    food animal.  Please list the main food staple and the setting, if appropriate.  For
    a list of acceptable animal feed terms or categories, please see http://www.feedipedia.org.  Multiple
    terms may apply and can be separated by pipes |Food product for animal covers
    foods intended for consumption by domesticated animals. Consult http://purl.obolibrary.org/obo/FOODON_03309997.
    If the proper descriptor is not listed please use text to describe the food type.
    Multiple terms can be separated by one or more pipes. If the proper descriptor
    is not listed please use text to describe the food product type
  title: food animal source diet
  examples:
  - value: Hay [FOODON:03301763]
  keywords:
  - animal
  - diet
  - food
  - source
  string_serialization: '{text}'
  slot_uri: MIXS:0001130
  multivalued: true
animal_feed_equip:
  annotations:
    Expected_value: EOL:0001757
  description: Description of the feeding equipment used for livestock. This field
    accepts terms listed under feed delivery (http://opendata.inra.fr/EOL/EOL_0001757).
    Multiple terms can be separated by pipes
  title: animal feeding equipment
  examples:
  - value: self feeding [EOL:0001645]| straight feed trough [EOL:0001661]
  keywords:
  - animal
  - equipment
  string_serialization: '{termLabel} [{termID}]'
  slot_uri: MIXS:0001113
  multivalued: true
animal_group_size:
  description: The number of food animals of the same species that are maintained
    together as a unit, i.e. a herd or flock
  title: food animal group size
  examples:
  - value: '80'
  keywords:
  - animal
  - food
  - size
  slot_uri: MIXS:0001129
  range: integer
animal_housing:
  description: Description of the housing system of the livestock. This field accepts
    terms listed under terrestrial management housing system (http://opendata.inra.fr/EOL/EOL_0001605)
  title: animal housing system
  examples:
  - value: pen rearing system [EOL:0001636]
  keywords:
  - animal
  slot_uri: MIXS:0001180
  multivalued: true
  range: string
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\]$
  structured_pattern:
    syntax: ^{termLabel} \[{termID}\]$
    interpolated: true
    partial_match: true
animal_intrusion:
  description: Identification of animals intruding on the sample or sample site including
    invertebrates (such as pests or pollinators) and vertebrates (such as wildlife
    or domesticated animals). This field accepts terms under organism (http://purl.obolibrary.org/obo/NCIT_C14250).
    This field also accepts identification numbers from NCBI under https://www.ncbi.nlm.nih.gov/taxonomy.
    Multiple terms can be separated by pipes
  title: animal intrusion near sample source
  examples:
  - value: Thripidae [NCBITaxon:45053]
  keywords:
  - animal
  - sample
  - source
  slot_uri: MIXS:0001114
  multivalued: true
  range: string
  pattern: ^(([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\])|[1-9][0-9]*$
  structured_pattern:
    syntax: ^({termLabel} \[{termID}\])|{integer}$
    interpolated: true
    partial_match: true
animal_sex:
  description: The sex and reproductive status of the food animal
  title: food animal source sex category
  examples:
  - value: castrated male
  keywords:
  - animal
  - food
  - source
  slot_uri: MIXS:0001249
  range: AnimalSexEnum
annot:
  annotations:
    Expected_value: name of tool or pipeline used, or annotation source description
  description: Tool used for annotation, or for cases where annotation was provided
    by a community jamboree or model organism database rather than by a specific submitter
  title: annotation
  examples:
  - value: prokka
  in_subset:
  - sequencing
  string_serialization: '{text}'
  slot_uri: MIXS:0000059
annual_precpt:
  annotations:
    Preferred_unit: millimeter
  description: The average of all annual precipitation values known, or an estimated
    equivalent value derived by such methods as regional indexes or Isohyetal maps
  title: mean annual precipitation
  keywords:
  - mean
  slot_uri: MIXS:0000644
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
annual_temp:
  annotations:
    Preferred_unit: degree Celsius
  description: Mean annual temperature
  title: mean annual temperature
  examples:
  - value: 12.5 degree Celsius
  keywords:
  - mean
  - temperature
  slot_uri: MIXS:0000642
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
antibiotic_regm:
  annotations:
    Expected_value: antibiotic name;antibiotic amount;treatment interval and duration
    Preferred_unit: milligram
  description: Information about treatment involving antibiotic administration; should
    include the name of antibiotic, amount administered, treatment regimen including
    how many times the treatment was repeated, how long each treatment lasted, and
    the start and end time of the entire treatment; can include multiple antibiotic
    regimens
  title: antibiotic regimen
  examples:
  - value: penicillin;5 milligram;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M
  keywords:
  - regimen
  string_serialization: '{text};{float} {unit};{Rn/start_time/end_time/duration}'
  slot_uri: MIXS:0000553
  multivalued: true
api:
  annotations:
    Preferred_unit: degrees API
  description: 'API gravity is a measure of how heavy or light a petroleum liquid
    is compared to water (source: https://en.wikipedia.org/wiki/API_gravity) (e.g.
    31.1   API)'
  title: API gravity
  examples:
  - value: 31.1 API
  slot_uri: MIXS:0000157
  range: string
  required: true
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
arch_struc:
  description: An architectural structure is a human-made, free-standing, immobile
    outdoor construction
  title: architectural structure
  examples:
  - value: shed
  slot_uri: MIXS:0000774
  range: ArchStrucEnum
area_samp_size:
  annotations:
    Expected_value: measurement value
    Preferred_unit: centimeter
  description: The total amount or size (volume (ml), mass (g) or area (m2) ) of sample
    collected
  title: area sampled size
  examples:
  - value: 12 centimeter x 12 centimeter
  keywords:
  - area
  - sample
  - size
  string_serialization: '{integer} {unit} x {integer} {unit}'
  slot_uri: MIXS:0001255
aromatics_pc:
  annotations:
    Preferred_unit: percent
  description: 'Saturate, Aromatic, Resin and Asphaltene  (SARA) is an analysis method
    that divides  crude oil  components according to their polarizability and polarity.
    There are three main methods to obtain SARA results. The most popular one is known
    as the Iatroscan TLC-FID and is referred to as IP-143 (source: https://en.wikipedia.org/wiki/Saturate,_aromatic,_resin_and_asphaltene)'
  title: aromatics wt%
  slot_uri: MIXS:0000133
  range: string
  recommended: true
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+);[-+]?[0-9]*\.?[0-9]+ ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{name};{float} {unit}$
    interpolated: true
    partial_match: true
asphaltenes_pc:
  annotations:
    Preferred_unit: percent
  description: 'Saturate, Aromatic, Resin and Asphaltene  (SARA) is an analysis method
    that divides  crude oil  components according to their polarizability and polarity.
    There are three main methods to obtain SARA results. The most popular one is known
    as the Iatroscan TLC-FID and is referred to as IP-143 (source: https://en.wikipedia.org/wiki/Saturate,_aromatic,_resin_and_asphaltene)'
  title: asphaltenes wt%
  slot_uri: MIXS:0000135
  range: string
  recommended: true
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+);[-+]?[0-9]*\.?[0-9]+ ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{name};{float} {unit}$
    interpolated: true
    partial_match: true
assembly_name:
  annotations:
    Expected_value: name and version of assembly
  description: Name/version of the assembly provided by the submitter that is used
    in the genome browsers and in the community
  title: assembly name
  examples:
  - value: HuRef, JCVI_ISG_i3_1.0
  in_subset:
  - sequencing
  string_serialization: '{text} {text}'
  slot_uri: MIXS:0000057
assembly_qual:
  annotations:
    Expected_value: enumeration
  description: 'The assembly quality category is based on sets of criteria outlined
    for each assembly quality category. For MISAG/MIMAG; Finished: Single, validated,
    contiguous sequence per replicon without gaps or ambiguities with a consensus
    error rate equivalent to Q50 or better. High Quality Draft:Multiple fragments
    where gaps span repetitive regions. Presence of the 23S, 16S and 5S rRNA genes
    and at least 18 tRNAs. Medium Quality Draft:Many fragments with little to no review
    of assembly other than reporting of standard assembly statistics. Low Quality
    Draft:Many fragments with little to no review of assembly other than reporting
    of standard assembly statistics. Assembly statistics include, but are not limited
    to total assembly size, number of contigs, contig N50/L50, and maximum contig
    length. For MIUVIG; Finished: Single, validated, contiguous sequence per replicon
    without gaps or ambiguities, with extensive manual review and editing to annotate
    putative gene functions and transcriptional units. High-quality draft genome:
    One or multiple fragments, totaling   90% of the expected genome or replicon sequence
    or predicted complete. Genome fragment(s): One or multiple fragments, totalling
    < 90% of the expected genome or replicon sequence, or for which no genome size
    could be estimated'
  title: assembly quality
  examples:
  - value: High-quality draft genome
  in_subset:
  - sequencing
  keywords:
  - quality
  string_serialization: '[Finished genome|High-quality draft genome|Medium-quality
    draft genome|Low-quality draft genome|Genome fragment(s)]'
  slot_uri: MIXS:0000056
assembly_software:
  description: Tool(s) used for assembly, including version number and parameters
  title: assembly software
  examples:
  - value: metaSPAdes;3.11.0;kmer set 21,33,55,77,99,121, default parameters otherwise
  in_subset:
  - sequencing
  keywords:
  - software
  slot_uri: MIXS:0000058
  range: string
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+);([^\s-]{1,2}|[^\s-]+.+[^\s-]+);([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{software};{version};{parameters}$
    interpolated: true
    partial_match: true
associated_resource:
  annotations:
    Expected_value: reference to resource
  description: A related resource that is referenced, cited, or otherwise associated
    to the sequence
  title: relevant electronic resources
  examples:
  - value: http://www.earthmicrobiome.org/
  in_subset:
  - sequencing
  keywords:
  - resource
  string_serialization: '{PMID}|{DOI}|{URL}'
  slot_uri: MIXS:0000091
  multivalued: true
  recommended: true
association_duration:
  annotations:
    Preferred_unit: year, day, hour
  description: Time spent in host of the symbiotic organism at the time of sampling;
    relevant scale depends on symbiotic organism and study
  title: duration of association with the host
  keywords:
  - duration
  - host
  - host.
  - period
  slot_uri: MIXS:0001299
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
atmospheric_data:
  annotations:
    Expected_value: atmospheric data name;measurement value
  description: Measurement of atmospheric data; can include multiple data
  title: atmospheric data
  examples:
  - value: wind speed;9 knots
  string_serialization: '{text};{float} {unit}'
  slot_uri: MIXS:0001097
  multivalued: true
avg_dew_point:
  annotations:
    Preferred_unit: degree Celsius
  description: The average of dew point measures taken at the beginning of every hour
    over a 24 hour period on the sampling day
  title: average dew point
  examples:
  - value: 25.5 degree Celsius
  keywords:
  - average
  slot_uri: MIXS:0000141
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
avg_occup:
  description: Daily average occupancy of room. Indicate the number of person(s) daily
    occupying the sampling room
  title: average daily occupancy
  keywords:
  - average
  slot_uri: MIXS:0000775
  range: float
avg_temp:
  annotations:
    Preferred_unit: degree Celsius
  description: The average of temperatures taken at the beginning of every hour over
    a 24 hour period on the sampling day
  title: average temperature
  examples:
  - value: 12.5 degree Celsius
  keywords:
  - average
  - temperature
  slot_uri: MIXS:0000142
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
bac_prod:
  annotations:
    Preferred_unit: milligram per cubic meter per day
  description: Bacterial production in the water column measured by isotope uptake
  title: bacterial production
  examples:
  - value: 5 milligram per cubic meter per day
  keywords:
  - production
  slot_uri: MIXS:0000683
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
bac_resp:
  annotations:
    Preferred_unit: milligram per cubic meter per day, micromole oxygen per liter
      per hour
  description: Measurement of bacterial respiration in the water column
  title: bacterial respiration
  examples:
  - value: 300 micromole oxygen per liter per hour
  slot_uri: MIXS:0000684
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
bacteria_carb_prod:
  description: Measurement of bacterial carbon production
  title: bacterial carbon production
  examples:
  - value: 2.53 microgram per liter per hour
  keywords:
  - carbon
  - production
  slot_uri: MIXS:0000173
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
bacterial_density:
  annotations:
    Preferred_unit: colony forming units per milliliter; colony forming units per
      gram of dry weight
  description: Number of bacteria in sample, as defined by bacteria density (http://purl.obolibrary.org/obo/GENEPIO_0000043)
  title: bacteria density
  examples:
  - value: 10 colony forming units per gram dry weight
  keywords:
  - density
  slot_uri: MIXS:0001194
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
barometric_press:
  annotations:
    Preferred_unit: millibar
  description: Force per unit area exerted against a surface by the weight of air
    above that surface
  title: barometric pressure
  examples:
  - value: 5 millibar
  keywords:
  - pressure
  slot_uri: MIXS:0000096
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
basin:
  description: Name of the basin (e.g. Campos)
  title: basin name
  examples:
  - value: Campos
  slot_uri: MIXS:0000290
  range: string
  required: true
bathroom_count:
  description: The number of bathrooms in the building
  title: bathroom count
  examples:
  - value: '1'
  keywords:
  - count
  slot_uri: MIXS:0000776
  range: integer
bedroom_count:
  description: The number of bedrooms in the building
  title: bedroom count
  examples:
  - value: '2'
  keywords:
  - count
  slot_uri: MIXS:0000777
  range: integer
benzene:
  annotations:
    Preferred_unit: milligram per liter, parts per million
  description: Concentration of benzene in the sample
  title: benzene
  slot_uri: MIXS:0000153
  range: string
  recommended: true
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
bin_param:
  description: The parameters that have been applied during the extraction of genomes
    from metagenomic datasets
  title: binning parameters
  examples:
  - value: coverage
    description: was 'coverage and kmer'
  - value: kmer
    description: was coverage and kmer
  in_subset:
  - sequencing
  keywords:
  - parameter
  slot_uri: MIXS:0000077
  range: BinParamEnum
bin_software:
  annotations:
    Expected_value: names and versions of software(s) used
  description: Tool(s) used for the extraction of genomes from metagenomic datasets,
    where possible include a product ID (PID) of the tool(s) used
  title: binning software
  examples:
  - value: MetaCluster-TA (RRID:SCR_004599), MaxBin (biotools:maxbin)
  in_subset:
  - sequencing
  keywords:
  - software
  string_serialization: '{software};{version}{PID}'
  slot_uri: MIXS:0000078
biochem_oxygen_dem:
  annotations:
    Preferred_unit: milligram per liter
  description: Amount of dissolved oxygen needed by aerobic biological organisms in
    a body of water to break down organic material present in a given water sample
    at certain temperature over a specific time period
  title: biochemical oxygen demand
  keywords:
  - oxygen
  slot_uri: MIXS:0000653
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
biocide:
  annotations:
    Expected_value: name;name;timestamp
  description: List of biocides (commercial name of product and supplier) and date
    of administration
  title: biocide administration
  examples:
  - value: ALPHA 1427;Baker Hughes;2008-01-23
  keywords:
  - administration
  string_serialization: '{text};{text};{timestamp}'
  slot_uri: MIXS:0001011
  recommended: true
biocide_admin_method:
  annotations:
    Expected_value: measurement value;frequency;duration;duration
    Preferred_unit: milligram per liter
  description: Method of biocide administration (dose, frequency, duration, time elapsed
    between last biociding and sampling) (e.g. 150 mg/l; weekly; 4 hr; 3 days)
  title: biocide administration method
  keywords:
  - administration
  - method
  string_serialization: '{float} {unit};{Rn/start_time/end_time/duration};{duration}'
  slot_uri: MIXS:0000456
  recommended: true
biocide_used:
  annotations:
    Expected_value: commercial name of biocide, active ingredient in biocide or class
      of biocide
  description: Substance intended for preventing, neutralizing, destroying, repelling,
    or mitigating the effects of any pest or microorganism; that inhibits the growth,
    reproduction, and activity of organisms, including fungal cells; decreases the
    number of fungi or pests present; deters microbial growth and degradation of other
    ingredients in the formulation. Indicate the biocide used on the location where
    the sample was taken. Multiple terms can be separated by pipes
  title: biocide
  examples:
  - value: Quaternary ammonium compound|SterBac
  string_serialization: '{text}'
  slot_uri: MIXS:0001258
  multivalued: true
biol_stat:
  annotations:
    Expected_value: enumeration
  description: The level of genome modification
  title: biological status
  examples:
  - value: natural
  keywords:
  - status
  string_serialization: '[wild|natural|semi-natural|inbred line|breeder''s line|hybrid|clonal
    selection|mutant]'
  slot_uri: MIXS:0000858
biomass:
  annotations:
    Expected_value: biomass type;measurement value
    Preferred_unit: ton, kilogram, gram
  description: Amount of biomass; should include the name for the part of biomass
    measured, e.g. Microbial, total. Can include multiple measurements
  title: biomass
  examples:
  - value: total;20 gram
  keywords:
  - biomass
  string_serialization: '{text};{float} {unit}'
  slot_uri: MIXS:0000174
  multivalued: true
biotic_regm:
  description: Information about treatment(s) involving use of biotic factors, such
    as bacteria, viruses or fungi
  title: biotic regimen
  examples:
  - value: sample inoculated with Rhizobium spp. Culture
  keywords:
  - regimen
  slot_uri: MIXS:0001038
  multivalued: true
  range: string
biotic_relationship:
  description: Description of relationship(s) between the subject organism and other
    organism(s) it is associated with. E.g., parasite on species X; mutualist with
    species Y. The target organism is the subject of the relationship, and the other
    organism(s) is the object
  title: observed biotic relationship
  examples:
  - value: free living
  in_subset:
  - nucleic acid sequence source
  keywords:
  - observed
  - relationship
  slot_uri: MIXS:0000028
  range: BioticRelationshipEnum
birth_control:
  annotations:
    Expected_value: medication name
  description: Specification of birth control medication used
  title: birth control
  string_serialization: '{text}'
  slot_uri: MIXS:0000286
bishomohopanol:
  annotations:
    Preferred_unit: microgram per liter, microgram per gram
  description: Concentration of bishomohopanol
  title: bishomohopanol
  examples:
  - value: 14 microgram per liter
  slot_uri: MIXS:0000175
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
blood_blood_disord:
  description: History of blood disorders; can include multiple disorders.  The terms
    should be chosen from the DO (Human Disease Ontology) at http://www.disease-ontology.org,
    hematopoietic system disease (https://disease-ontology.org/?id=DOID:74)
  title: blood/blood disorder
  keywords:
  - disorder
  slot_uri: MIXS:0000271
  multivalued: true
  range: string
blood_press_diast:
  annotations:
    Preferred_unit: millimeter mercury
  description: Resting diastolic blood pressure, measured as mm mercury
  title: host blood pressure diastolic
  keywords:
  - host
  - host.
  - pressure
  slot_uri: MIXS:0000258
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
blood_press_syst:
  annotations:
    Preferred_unit: millimeter mercury
  description: Resting systolic blood pressure, measured as mm mercury
  title: host blood pressure systolic
  keywords:
  - host
  - host.
  - pressure
  slot_uri: MIXS:0000259
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
bromide:
  annotations:
    Preferred_unit: parts per million
  description: Concentration of bromide
  title: bromide
  examples:
  - value: 0.05 parts per million
  slot_uri: MIXS:0000176
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
build_docs:
  description: The building design, construction and operation documents
  title: design, construction, and operation documents
  examples:
  - value: maintenance plans
  keywords:
  - documents
  slot_uri: MIXS:0000787
  range: BuildDocsEnum
build_occup_type:
  description: The primary function for which a building or discrete part of a building
    is intended to be used
  title: building occupancy type
  examples:
  - value: market
  keywords:
  - type
  slot_uri: MIXS:0000761
  multivalued: true
  range: BuildOccupTypeEnum
  required: true
building_setting:
  description: A location (geography) where a building is set
  title: building setting
  examples:
  - value: rural
  slot_uri: MIXS:0000768
  range: BuildingSettingEnum
  required: true
built_struc_age:
  annotations:
    Preferred_unit: year
  description: The age of the built structure since construction
  title: built structure age
  examples:
  - value: 15 years
  keywords:
  - age
  slot_uri: MIXS:0000145
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
built_struc_set:
  description: The characterization of the location of the built structure as high
    or low human density
  title: built structure setting
  examples:
  - value: rural
  slot_uri: MIXS:0000778
  range: BuiltStrucSetEnum
built_struc_type:
  description: A physical structure that is a body or assemblage of bodies in space
    to form a system capable of supporting loads
  title: built structure type
  keywords:
  - type
  slot_uri: MIXS:0000721
  range: string
calcium:
  annotations:
    Preferred_unit: milligram per liter, micromole per liter, parts per million
  description: Concentration of calcium in the sample
  title: calcium
  examples:
  - value: 0.2 micromole per liter
  slot_uri: MIXS:0000432
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
carb_dioxide:
  annotations:
    Preferred_unit: micromole per liter, parts per million
  description: Carbon dioxide (gas) amount or concentration at the time of sampling
  title: carbon dioxide
  examples:
  - value: 410 parts per million
  keywords:
  - carbon
  slot_uri: MIXS:0000097
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
carb_monoxide:
  annotations:
    Preferred_unit: micromole per liter, parts per million
  description: Carbon monoxide (gas) amount or concentration at the time of sampling
  title: carbon monoxide
  examples:
  - value: 0.1 parts per million
  keywords:
  - carbon
  slot_uri: MIXS:0000098
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
carb_nitro_ratio:
  annotations:
    Expected_value: measurement value
  description: Ratio of amount or concentrations of carbon to nitrogen
  title: carbon/nitrogen ratio
  examples:
  - value: '0.417361111'
  keywords:
  - carbon
  - nitrogen
  - ratio
  string_serialization: '{float}:{float}'
  slot_uri: MIXS:0000310
  range: float
ceil_area:
  annotations:
    Preferred_unit: square meter
  description: The area of the ceiling space within the room
  title: ceiling area
  examples:
  - value: 25 square meter
  keywords:
  - area
  - ceiling
  slot_uri: MIXS:0000148
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
ceil_cond:
  description: The physical condition of the ceiling at the time of sampling; photos
    or video preferred; use drawings to indicate location of damaged areas
  title: ceiling condition
  examples:
  - value: damaged
  keywords:
  - ceiling
  - condition
  slot_uri: MIXS:0000779
  range: DamagedEnum
ceil_finish_mat:
  description: The type of material used to finish a ceiling
  title: ceiling finish material
  examples:
  - value: stucco
  keywords:
  - ceiling
  - material
  slot_uri: MIXS:0000780
  range: CeilFinishMatEnum
ceil_struc:
  description: The construction format of the ceiling
  title: ceiling structure
  examples:
  - value: concrete
  keywords:
  - ceiling
  slot_uri: MIXS:0000782
  range: CeilStrucEnum
ceil_texture:
  description: The feel, appearance, or consistency of a ceiling surface
  title: ceiling texture
  examples:
  - value: popcorn
  keywords:
  - ceiling
  - texture
  slot_uri: MIXS:0000783
  range: CeilingWallTextureEnum
ceil_thermal_mass:
  annotations:
    Preferred_unit: joule per degree Celsius
  description: The ability of the ceiling to provide inertia against temperature fluctuations.
    Generally this means concrete that is exposed. A metal deck that supports a concrete
    slab will act thermally as long as it is exposed to room air flow
  title: ceiling thermal mass
  keywords:
  - ceiling
  - mass
  slot_uri: MIXS:0000143
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
ceil_type:
  description: The type of ceiling according to the ceiling's appearance or construction
  title: ceiling type
  examples:
  - value: coffered
  keywords:
  - ceiling
  - type
  slot_uri: MIXS:0000784
  range: CeilTypeEnum
ceil_water_mold:
  description: Signs of the presence of mold or mildew on the ceiling
  title: ceiling signs of water/mold
  examples:
  - value: presence of mold visible
  keywords:
  - ceiling
  slot_uri: MIXS:0000781
  range: MoldVisibilityEnum
chem_administration:
  annotations:
    Expected_value: CHEBI;timestamp
  description: List of chemical compounds administered to the host or site where sampling
    occurred, and when (e.g. Antibiotics, n fertilizer, air filter); can include multiple
    compounds. For chemical entities of biological interest ontology (chebi) (v 163),
    http://purl.bioontology.org/ontology/chebi
  title: chemical administration
  examples:
  - value: agar [CHEBI:2509];2018-05-11T20:00Z
  keywords:
  - administration
  string_serialization: '{termLabel} [{termID}];{timestamp}'
  slot_uri: MIXS:0000751
  multivalued: true
chem_mutagen:
  annotations:
    Expected_value: mutagen name;mutagen amount;treatment interval and duration
    Preferred_unit: milligram per liter
  description: Treatment involving use of mutagens; should include the name of mutagen,
    amount administered, treatment regimen including how many times the treatment
    was repeated, how long each treatment lasted, and the start and end time of the
    entire treatment; can include multiple mutagen regimens
  title: chemical mutagen
  examples:
  - value: nitrous acid;0.5 milligram per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M
  string_serialization: '{text};{float} {unit};{Rn/start_time/end_time/duration}'
  slot_uri: MIXS:0000555
  multivalued: true
chem_oxygen_dem:
  annotations:
    Preferred_unit: milligram per liter
  description: A measure of the capacity of water to consume oxygen during the decomposition
    of organic matter and the oxidation of inorganic chemicals such as ammonia and
    nitrite
  title: chemical oxygen demand
  keywords:
  - oxygen
  slot_uri: MIXS:0000656
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
chem_treat_method:
  annotations:
    Expected_value: measurement value;frequency;duration;duration
    Preferred_unit: milligram per liter
  description: Method of chemical administration(dose, frequency, duration, time elapsed
    between administration and sampling) (e.g. 50 mg/l; twice a week; 1 hr; 0 days)
  title: chemical treatment method
  keywords:
  - method
  - treatment
  string_serialization: '{float} {unit};{Rn/start_time/end_time/duration};{duration};{duration}'
  slot_uri: MIXS:0000457
chem_treatment:
  annotations:
    Expected_value: name;name;timestamp
  description: List of chemical compounds administered upstream the sampling location
    where sampling occurred (e.g. Glycols, H2S scavenger, corrosion and scale inhibitors,
    demulsifiers, and other production chemicals etc.). The commercial name of the
    product and name of the supplier should be provided. The date of administration
    should also be included
  title: chemical treatment
  examples:
  - value: ACCENT 1125;DOW;2010-11-17
  keywords:
  - treatment
  string_serialization: '{text};{text};{timestamp}'
  slot_uri: MIXS:0001012
chimera_check:
  description: Tool(s) used for chimera checking, including version number and parameters,
    to discover and remove chimeric sequences. A chimeric sequence is comprised of
    two or more phylogenetically distinct parent sequences
  title: chimera check software
  examples:
  - value: uchime;v4.1;default parameters
  in_subset:
  - sequencing
  keywords:
  - software
  slot_uri: MIXS:0000052
  range: string
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+);([^\s-]{1,2}|[^\s-]+.+[^\s-]+);([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{software};{version};{parameters}$
    interpolated: true
    partial_match: true
chloride:
  annotations:
    Preferred_unit: milligram per liter, parts per million
  description: Concentration of chloride in the sample
  title: chloride
  examples:
  - value: 5000 milligram per liter
  slot_uri: MIXS:0000429
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
chlorophyll:
  annotations:
    Preferred_unit: milligram per cubic meter, microgram per liter
  description: Concentration of chlorophyll
  title: chlorophyll
  examples:
  - value: 5 milligram per cubic meter
  slot_uri: MIXS:0000177
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
climate_environment:
  description: Treatment involving an exposure to a particular climate; treatment
    regimen including how many times the treatment was repeated, how long each treatment
    lasted, and the start and end time of the entire treatment; can include multiple
    climates
  title: climate environment
  examples:
  - value: tropical climate;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M
  keywords:
  - environment
  slot_uri: MIXS:0001040
  multivalued: true
  range: string
coll_site_geo_feat:
  annotations:
    Expected_value: ENVO:00000002 or ENVO:00000070
  description: 'Text or terms that describe the geographic feature where the food
    sample was obtained by the researcher. This field accepts selected terms listed
    under the following ontologies: anthropogenic geographic feature (http://purl.obolibrary.org/obo/ENVO_00000002),
    for example agricultural fairground [ENVO:01000986]; garden [ENVO:00000011} or
    any of its subclasses; market [ENVO:01000987]; water well [ENVO:01000002]; or
    human construction (http://purl.obolibrary.org/obo/ENVO_00000070)'
  title: collection site geographic feature
  examples:
  - value: farm [ENVO:00000078]
  keywords:
  - feature
  - geographic
  - site
  string_serialization: '{text}|{termLabel} [{termID}]'
  slot_uri: MIXS:0001183
  required: true
collection_date:
  description: 'The time of sampling, either as an instance (single point in time)
    or interval. In case no exact time is available, the date/time can be right truncated
    i.e. all of these are valid times: 2008-01-23T19:23:10+00:00; 2008-01-23T19:23:10;
    2008-01-23; 2008-01; 2008; Except: 2008-01; 2008 all are ISO8601 compliant'
  title: collection date
  examples:
  - value: '2013-03-25T12:42:31+01:00'
  in_subset:
  - environment
  keywords:
  - date
  slot_uri: MIXS:0000011
  range: datetime
  required: true
compl_appr:
  annotations:
    Expected_value: text
  description: The approach used to determine the completeness of a given genomic
    assembly, which would typically make use of a set of conserved marker genes or
    a closely related reference genome. For UViG completeness, include reference genome
    or group used, and contig feature suggesting a complete genome
  title: completeness approach
  examples:
  - value: other
    description: was other <colon> UViG length compared to the average length of reference
      genomes from the P22virus genus (NCBI RefSeq v83)
  in_subset:
  - sequencing
  slot_uri: MIXS:0000071
  range: ComplApprEnum
compl_score:
  annotations:
    Expected_value: quality;percent completeness
  description: 'Completeness score is typically based on either the fraction of markers
    found as compared to a database or the percent of a genome found as compared to
    a closely related reference genome. High Quality Draft: >90%, Medium Quality Draft:
    >50%, and Low Quality Draft: < 50% should have the indicated completeness scores'
  title: completeness score
  examples:
  - value: med;60%
  in_subset:
  - sequencing
  keywords:
  - score
  string_serialization: '[high|med|low];{percentage}'
  slot_uri: MIXS:0000069
compl_software:
  annotations:
    Expected_value: names and versions of software(s) used
  description: Tools used for completion estimate, i.e. checkm, anvi'o, busco
  title: completeness software
  examples:
  - value: checkm
  in_subset:
  - sequencing
  keywords:
  - software
  string_serialization: '{software};{version}'
  slot_uri: MIXS:0000070
conduc:
  annotations:
    Preferred_unit: milliSiemens per centimeter
  description: Electrical conductivity of water
  title: conductivity
  examples:
  - value: 10 milliSiemens per centimeter
  slot_uri: MIXS:0000692
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
cons_food_stor_dur:
  annotations:
    Preferred_unit: hours or days
  description: The storage duration of the food commodity by the consumer, prior to
    onset of illness or sample collection.  Indicate the timepoint written in ISO
    8601 format
  title: food stored by consumer (storage duration)
  examples:
  - value: P5D
  keywords:
  - consumer
  - duration)
  - food
  - storage
  slot_uri: MIXS:0001195
  range: string
  pattern: ^P(?:(?:\d+D|\d+M(?:\d+D)?|\d+Y(?:\d+M(?:\d+D)?)?)(?:T(?:\d+H(?:\d+M(?:\d+S)?)?|\d+M(?:\d+S)?|\d+S))?|T(?:\d+H(?:\d+M(?:\d+S)?)?|\d+M(?:\d+S)?|\d+S)|\d+W)$
  structured_pattern:
    syntax: ^{duration}$
    interpolated: true
    partial_match: true
cons_food_stor_temp:
  annotations:
    Expected_value: text or measurement value
    Preferred_unit: degree Celsius
  description: Temperature at which food commodity was stored by the consumer, prior
    to onset of illness or sample collection
  title: food stored by consumer (storage temperature)
  examples:
  - value: 4 degree Celsius
  keywords:
  - consumer
  - food
  - storage
  - temperature
  string_serialization: '{float} {unit}|{text}'
  slot_uri: MIXS:0001196
cons_purch_date:
  description: The date a food product was purchased by consumer
  title: purchase date
  examples:
  - value: '2013-03-25T12:42:31+01:00'
  keywords:
  - date
  slot_uri: MIXS:0001197
  range: datetime
cons_qty_purchased:
  description: The quantity of food purchased by consumer
  title: quantity purchased
  examples:
  - value: 5 cans
  keywords:
  - quantity
  slot_uri: MIXS:0001198
  range: string
  pattern: ^[1-9][0-9]* ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{integer} {text}$
    interpolated: true
    partial_match: true
contam_score:
  description: 'The contamination score is based on the fraction of single-copy genes
    that are observed more than once in a query genome. The following scores are acceptable
    for; High Quality Draft: < 5%, Medium Quality Draft: < 10%, Low Quality Draft:
    < 10%. Contamination must be below 5% for a SAG or MAG to be deposited into any
    of the public databases'
  title: contamination score
  examples:
  - value: '0.01'
  in_subset:
  - sequencing
  keywords:
  - score
  slot_uri: MIXS:0000072
  range: float
contam_screen_input:
  description: The type of sequence data used as input
  title: contamination screening input
  examples:
  - value: contigs
  in_subset:
  - sequencing
  slot_uri: MIXS:0000005
  range: ContamScreenInputEnum
contam_screen_param:
  annotations:
    Expected_value: enumeration;value or name
  description: Specific parameters used in the decontamination sofware, such as reference
    database, coverage, and kmers. Combinations of these parameters may also be used,
    i.e. kmer and coverage, or reference database and kmer
  title: contamination screening parameters
  examples:
  - value: kmer
  in_subset:
  - sequencing
  keywords:
  - parameter
  string_serialization: '[ref db|kmer|coverage|combination];{text|integer}'
  slot_uri: MIXS:0000073
cool_syst_id:
  description: The cooling system identifier
  title: cooling system identifier
  examples:
  - value: '12345'
  keywords:
  - identifier
  slot_uri: MIXS:0000785
  range: integer
crop_rotation:
  annotations:
    Expected_value: crop rotation status;schedule
  description: Whether or not crop is rotated, and if yes, rotation schedule
  title: history/crop rotation
  examples:
  - value: yes;R2/2017-01-01/2018-12-31/P6M
  keywords:
  - history
  slot_uri: MIXS:0000318
crop_yield:
  annotations:
    Preferred_unit: kilogram per metre square
  description: Amount of crop produced per unit or area of land
  title: crop yield
  examples:
  - value: 570 kilogram per metre square
  keywords:
  - crop
  slot_uri: MIXS:0001116
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
cult_isol_date:
  description: The datetime marking the end of a process in which a sample yields
    a positive result for the target microbial analyte(s) in the form of an isolated
    colony or colonies
  title: culture isolation date
  examples:
  - value: '2018-05-11T10:00:00+01:00'
  keywords:
  - culture
  - date
  - isolation
  slot_uri: MIXS:0001181
  range: datetime
cult_result:
  description: Any result of a bacterial culture experiment reported as a binary assessment
    such as positive/negative, active/inactive
  title: culture result
  examples:
  - value: positive
  keywords:
  - culture
  slot_uri: MIXS:0001117
  range: CultResultEnum
cult_result_org:
  description: Taxonomic information about the cultured organism(s)
  title: culture result organism
  examples:
  - value: Listeria monocytogenes [NCIT:C86502]
  keywords:
  - culture
  - organism
  slot_uri: MIXS:0001118
  multivalued: true
  range: string
  pattern: ^(([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\])|[1-9][0-9]*$
  structured_pattern:
    syntax: ^({termLabel} \[{termID}\])|{integer}$
    interpolated: true
    partial_match: true
cult_root_med:
  annotations:
    Expected_value: name, PMID,DOI or url
  description: Name or reference for the hydroponic or in vitro culture rooting medium;
    can be the name of a commonly used medium or reference to a specific medium, e.g.
    Murashige and Skoog medium. If the medium has not been formally published, use
    the rooting medium descriptors
  title: culture rooting medium
  examples:
  - value: http://himedialabs.com/TD/PT158.pdf
  keywords:
  - culture
  string_serialization: '{text}|{PMID}|{DOI}|{URL}'
  slot_uri: MIXS:0001041
cult_target:
  annotations:
    Expected_value: NCIT:C14250 or NCBI taxid or culture independent
  description: The target microbial analyte in terms of investigation scope. This
    field accepts terms under organism (http://purl.obolibrary.org/obo/NCIT_C14250).
    This field also accepts identification numbers from NCBI under https://www.ncbi.nlm.nih.gov/taxonomy
  title: culture target microbial analyte
  examples:
  - value: Listeria monocytogenes [NCIT:C86502]
  keywords:
  - culture
  - microbial
  - target
  string_serialization: '{termLabel} [{termID}]|{integer}'
  slot_uri: MIXS:0001119
  multivalued: true
cur_land_use:
  annotations:
    Expected_value: enumeration
  description: Present state of sample site
  title: current land use
  examples:
  - value: conifers
  keywords:
  - land
  - use
  string_serialization: '[cities|farmstead|industrial areas|roads/railroads|rock|sand|gravel|mudflats|salt
    flats|badlands|permanent snow or ice|saline seeps|mines/quarries|oil waste areas|small
    grains|row crops|vegetable crops|horticultural plants (e.g. tulips)|marshlands
    (grass,sedges,rushes)|tundra (mosses,lichens)|rangeland|pastureland (grasslands
    used for livestock grazing)|hayland|meadows (grasses,alfalfa,fescue,bromegrass,timothy)|shrub
    land (e.g. mesquite,sage-brush,creosote bush,shrub oak,eucalyptus)|successional
    shrub land (tree saplings,hazels,sumacs,chokecherry,shrub dogwoods,blackberries)|shrub
    crops (blueberries,nursery ornamentals,filberts)|vine crops (grapes)|conifers
    (e.g. pine,spruce,fir,cypress)|hardwoods (e.g. oak,hickory,elm,aspen)|intermixed
    hardwood and conifers|tropical (e.g. mangrove,palms)|rainforest (evergreen forest
    receiving >406 cm annual rainfall)|swamp (permanent or semi-permanent water body
    dominated by woody plants)|crop trees (nuts,fruit,christmas trees,nursery trees)]'
  slot_uri: MIXS:0001080
cur_vegetation:
  annotations:
    Expected_value: current vegetation type
  description: Vegetation classification from one or more standard classification
    systems, or agricultural crop
  title: current vegetation
  keywords:
  - vegetation
  string_serialization: '{text}'
  slot_uri: MIXS:0000312
cur_vegetation_meth:
  description: Reference or method used in vegetation classification
  title: current vegetation method
  keywords:
  - method
  - vegetation
  slot_uri: MIXS:0000314
  range: string
  pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$$
  structured_pattern:
    syntax: ^{PMID}|{DOI}|{URL}$
    interpolated: true
    partial_match: true
date_extr_weath:
  description: Date of unusual weather events that may have affected microbial populations.
    Multiple terms can be separated by pipes, listed in reverse chronological order
  title: extreme weather date
  examples:
  - value: '2013-03-25T12:42:31+01:00'
  keywords:
  - date
  - extreme
  - weather
  slot_uri: MIXS:0001142
  multivalued: true
  range: datetime
date_last_rain:
  description: The date of the last time it rained
  title: date last rain
  examples:
  - value: '2013-03-25T12:42:31+01:00'
  keywords:
  - date
  - rain
  slot_uri: MIXS:0000786
  range: datetime
decontam_software:
  annotations:
    Expected_value: enumeration
  description: Tool(s) used in contamination screening
  title: decontamination software
  examples:
  - value: anvi'o
  in_subset:
  - sequencing
  keywords:
  - software
  string_serialization: '[checkm/refinem|anvi''o|prodege|bbtools:decontaminate.sh|acdc|combination]'
  slot_uri: MIXS:0000074
density:
  annotations:
    Preferred_unit: gram per cubic meter, gram per cubic centimeter
  description: Density of the sample, which is its mass per unit volume (aka volumetric
    mass density)
  title: density
  examples:
  - value: 1000 kilogram per cubic meter
  keywords:
  - density
  slot_uri: MIXS:0000435
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
depos_env:
  description: Main depositional environment (https://en.wikipedia.org/wiki/Depositional_environment).
    If "other" is specified, please propose entry in "additional info" field
  title: depositional environment
  keywords:
  - environment
  slot_uri: MIXS:0000992
  range: DeposEnvEnum
  recommended: true
depth:
  annotations:
    Preferred_unit: meter
  description: The vertical distance below local surface. For sediment or soil samples
    depth is measured from sediment or soil surface, respectively. Depth can be reported
    as an interval for subsurface samples
  title: depth
  in_subset:
  - environment
  keywords:
  - depth
  slot_uri: MIXS:0000018
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
dermatology_disord:
  description: History of dermatology disorders; can include multiple disorders. The
    terms should be chosen from the DO (Human Disease Ontology) at http://www.disease-ontology.org,
    skin disease (https://disease-ontology.org/?id=DOID:37)
  title: dermatology disorder
  keywords:
  - disorder
  slot_uri: MIXS:0000284
  multivalued: true
  range: string
detec_type:
  annotations:
    Expected_value: enumeration
  description: Type of UViG detection
  title: detection type
  examples:
  - value: independent sequence (UViG)
  in_subset:
  - sequencing
  keywords:
  - type
  string_serialization: '[independent sequence (UViG)|provirus (UpViG)]'
  slot_uri: MIXS:0000084
dew_point:
  annotations:
    Preferred_unit: degree Celsius
  description: The temperature to which a given parcel of humid air must be cooled,
    at constant barometric pressure, for water vapor to condense into water
  title: dew point
  examples:
  - value: 22 degree Celsius
  slot_uri: MIXS:0000129
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
diet_last_six_month:
  annotations:
    Expected_value: diet change;current diet
  description: Specification of major diet changes in the last six months, if yes
    the change should be specified
  title: major diet change in last six months
  examples:
  - value: yes;vegetarian diet
  keywords:
  - diet
  - months
  string_serialization: '{boolean};{text}'
  slot_uri: MIXS:0000266
dietary_claim_use:
  annotations:
    Expected_value: FOODON:03510023
  description: These descriptors are used either for foods intended for special dietary
    use as defined in 21 CFR 105 or for foods that have special characteristics indicated
    in the name or labeling. This field accepts terms listed under dietary claim or
    use (http://purl.obolibrary.org/obo/FOODON_03510023). Multiple terms can be separated
    by one or more pipes, but please consider limiting this list to the most prominent
    dietary claim or use
  title: dietary claim or use
  examples:
  - value: No preservatives [FOODON:03510113]
  keywords:
  - diet
  - use
  string_serialization: '{text}|{termLabel} [{termID}]'
  slot_uri: MIXS:0001199
  multivalued: true
diether_lipids:
  annotations:
    Expected_value: diether lipid name;measurement value
    Preferred_unit: nanogram per liter
  description: Concentration of diether lipids; can include multiple types of diether
    lipids
  title: diether lipids
  examples:
  - value: 0.2 nanogram per liter
  string_serialization: '{text};{float} {unit}'
  slot_uri: MIXS:0000178
  multivalued: true
diss_carb_dioxide:
  annotations:
    Preferred_unit: micromole per liter, milligram per liter
  description: Concentration of dissolved carbon dioxide in the sample or liquid portion
    of the sample
  title: dissolved carbon dioxide
  examples:
  - value: 5 milligram per liter
  keywords:
  - carbon
  - dissolved
  slot_uri: MIXS:0000436
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
diss_hydrogen:
  annotations:
    Preferred_unit: micromole per liter
  description: Concentration of dissolved hydrogen
  title: dissolved hydrogen
  examples:
  - value: 0.3 micromole per liter
  keywords:
  - dissolved
  slot_uri: MIXS:0000179
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
diss_inorg_carb:
  annotations:
    Preferred_unit: microgram per liter, milligram per liter, parts per million
  description: Dissolved inorganic carbon concentration in the sample, typically measured
    after filtering the sample using a 0.45 micrometer filter
  title: dissolved inorganic carbon
  examples:
  - value: 2059 micromole per kilogram
  keywords:
  - carbon
  - dissolved
  - inorganic
  slot_uri: MIXS:0000434
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
diss_inorg_nitro:
  annotations:
    Preferred_unit: microgram per liter, micromole per liter
  description: Concentration of dissolved inorganic nitrogen
  title: dissolved inorganic nitrogen
  examples:
  - value: 761 micromole per liter
  keywords:
  - dissolved
  - inorganic
  - nitrogen
  slot_uri: MIXS:0000698
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
diss_inorg_phosp:
  description: Concentration of dissolved inorganic phosphorus in the sample
  title: dissolved inorganic phosphorus
  examples:
  - value: 56.5 micromole per liter
  keywords:
  - dissolved
  - inorganic
  - phosphorus
  slot_uri: MIXS:0000106
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
diss_iron:
  annotations:
    Preferred_unit: milligram per liter
  description: Concentration of dissolved iron in the sample
  title: dissolved iron
  keywords:
  - dissolved
  slot_uri: MIXS:0000139
  range: string
  recommended: true
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
diss_org_carb:
  annotations:
    Preferred_unit: micromole per liter, milligram per liter
  description: Concentration of dissolved organic carbon in the sample, liquid portion
    of the sample, or aqueous phase of the fluid
  title: dissolved organic carbon
  examples:
  - value: 197 micromole per liter
  keywords:
  - carbon
  - dissolved
  - organic
  slot_uri: MIXS:0000433
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
diss_org_nitro:
  description: Dissolved organic nitrogen concentration measured as; total dissolved
    nitrogen - NH4 - NO3 - NO2
  title: dissolved organic nitrogen
  examples:
  - value: 0.05 micromole per liter
  keywords:
  - dissolved
  - nitrogen
  - organic
  slot_uri: MIXS:0000162
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
diss_oxygen:
  annotations:
    Preferred_unit: micromole per kilogram, milligram per liter
  description: Concentration of dissolved oxygen
  title: dissolved oxygen
  examples:
  - value: 175 micromole per kilogram
  keywords:
  - dissolved
  - oxygen
  slot_uri: MIXS:0000119
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
diss_oxygen_fluid:
  annotations:
    Preferred_unit: micromole per kilogram, milligram per liter
  description: Concentration of dissolved oxygen in the oil field produced fluids
    as it contributes to oxgen-corrosion and microbial activity (e.g. Mic)
  title: dissolved oxygen in fluids
  keywords:
  - dissolved
  - oxygen
  slot_uri: MIXS:0000438
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
dominant_hand:
  description: Dominant hand of the subject
  title: dominant hand
  examples:
  - value: right
  slot_uri: MIXS:0000944
  range: DominantHandEnum
door_comp_type:
  description: The composite type of the door
  title: door type, composite
  examples:
  - value: revolving
  keywords:
  - door
  - type
  slot_uri: MIXS:0000795
  range: DoorCompTypeEnum
door_cond:
  description: The phsical condition of the door
  title: door condition
  examples:
  - value: new
  keywords:
  - condition
  - door
  slot_uri: MIXS:0000788
  range: DamagedRupturedEnum
door_direct:
  description: The direction the door opens
  title: door direction of opening
  examples:
  - value: inward
  keywords:
  - direction
  - door
  slot_uri: MIXS:0000789
  range: DoorDirectEnum
door_loc:
  description: The relative location of the door in the room
  title: door location
  examples:
  - value: north
  keywords:
  - door
  - location
  slot_uri: MIXS:0000790
  range: CompassDirections8Enum
door_mat:
  description: The material the door is composed of
  title: door material
  examples:
  - value: wood
  keywords:
  - door
  - material
  slot_uri: MIXS:0000791
  range: DoorMatEnum
door_move:
  description: The type of movement of the door
  title: door movement
  examples:
  - value: swinging
  keywords:
  - door
  slot_uri: MIXS:0000792
  range: DoorMoveEnum
door_size:
  annotations:
    Preferred_unit: square meter
  description: The size of the door
  title: door area or size
  examples:
  - value: 2.5 square meter
  keywords:
  - area
  - door
  - size
  slot_uri: MIXS:0000158
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
door_type:
  description: The type of door material
  title: door type
  examples:
  - value: wooden
  keywords:
  - door
  - type
  slot_uri: MIXS:0000794
  range: DoorTypeEnum
door_type_metal:
  description: The type of metal door
  title: door type, metal
  examples:
  - value: hollow
  keywords:
  - door
  - type
  slot_uri: MIXS:0000796
  range: DoorTypeMetalEnum
door_type_wood:
  annotations:
    Expected_value: enumeration
  description: The type of wood door
  title: door type, wood
  examples:
  - value: battened
  keywords:
  - door
  - type
  string_serialization: '[bettened and ledged|battened|ledged and braced|battened|ledged
    and framed|battened|ledged, braced and frame|framed and paneled|glashed or sash|flush|louvered|wire
    gauged]'
  slot_uri: MIXS:0000797
door_water_mold:
  description: Signs of the presence of mold or mildew on a door
  title: door signs of water/mold
  examples:
  - value: presence of mold visible
  keywords:
  - door
  slot_uri: MIXS:0000793
  range: MoldVisibilityEnum
douche:
  description: Date of most recent douche
  title: douche
  examples:
  - value: '2013-03-25T12:42:31+01:00'
  slot_uri: MIXS:0000967
  range: datetime
down_par:
  annotations:
    Preferred_unit: microEinstein per square meter per second, microEinstein per square
      centimeter per second
  description: Visible waveband radiance and irradiance measurements in the water
    column
  title: downward PAR
  examples:
  - value: 28.71 microEinstein per square meter per second
  slot_uri: MIXS:0000703
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
drainage_class:
  description: Drainage classification from a standard system such as the USDA system
  title: drainage classification
  examples:
  - value: well
  keywords:
  - classification
  slot_uri: MIXS:0001085
  range: DrainageClassEnum
drawings:
  description: The buildings architectural drawings; if design is chosen, indicate
    phase-conceptual, schematic, design development, and construction documents
  title: drawings
  examples:
  - value: sketch
  keywords:
  - drawings
  slot_uri: MIXS:0000798
  range: DrawingsEnum
drug_usage:
  annotations:
    Expected_value: drug name;frequency
  description: Any drug used by subject and the frequency of usage; can include multiple
    drugs used
  title: drug usage
  examples:
  - value: Lipitor;2/day
  keywords:
  - drug
  - use
  string_serialization: '{text};{integer}/[year|month|week|day|hour]'
  slot_uri: MIXS:0000894
  multivalued: true
efficiency_percent:
  annotations:
    Preferred_unit: micromole per liter
  description: Percentage of volatile solids removed from the anaerobic digestor
  title: efficiency percent
  keywords:
  - percent
  slot_uri: MIXS:0000657
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
elev:
  annotations:
    Preferred_unit: meter
  description: Elevation of the sampling site is its height above a fixed reference
    point, most commonly the mean sea level. Elevation is mainly used when referring
    to points on the earth's surface, while altitude is used for points above the
    surface, such as an aircraft in flight or a spacecraft in orbit
  title: elevation
  examples:
  - value: 100 meter
  in_subset:
  - environment
  keywords:
  - elevation
  slot_uri: MIXS:0000093
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
elevator:
  description: The number of elevators within the built structure
  title: elevator count
  examples:
  - value: '2'
  keywords:
  - count
  slot_uri: MIXS:0000799
  range: integer
emulsions:
  annotations:
    Expected_value: emulsion name;measurement value
    Preferred_unit: gram per liter
  description: Amount or concentration of substances such as paints, adhesives, mayonnaise,
    hair colorants, emulsified oils, etc.; can include multiple emulsion types
  title: emulsions
  string_serialization: '{text};{float} {unit}'
  slot_uri: MIXS:0000660
  multivalued: true
encoded_traits:
  annotations:
    Expected_value: 'for plasmid: antibiotic resistance; for phage: converting genes'
  description: Should include key traits like antibiotic resistance or xenobiotic
    degradation phenotypes for plasmids, converting genes for phage
  title: encoded traits
  examples:
  - value: beta-lactamase class A
  in_subset:
  - nucleic acid sequence source
  string_serialization: '{text}'
  slot_uri: MIXS:0000034
enrichment_protocol:
  description: The microbiological workflow or protocol followed to test for the presence
    or enumeration of the target microbial analyte(s). Please provide a PubMed or
    DOI reference for published protocols
  title: enrichment protocol
  examples:
  - value: 'BAM Chapter 4: Enumeration of Escherichia coli and the Coliform Bacteria'
  keywords:
  - enrichment
  - protocol
  slot_uri: MIXS:0001177
  range: string
  pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$|([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{PMID}|{DOI}|{URL}|{text}$
    interpolated: true
    partial_match: true
env_broad_scale:
  description: 'Report the major environmental system the sample or specimen came
    from. The system(s) identified should have a coarse spatial grain, to provide
    the general environmental context of where the sampling was done (e.g. in the
    desert or a rainforest). We recommend using subclasses of EnvO s biome class:  http://purl.obolibrary.org/obo/ENVO_00000428.
    EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS'
  title: broad-scale environmental context
  examples:
  - value: rangeland biome [ENVO:01000247]
  in_subset:
  - environment
  keywords:
  - context
  - environmental
  slot_uri: MIXS:0000012
  range: string
  required: true
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\]$
  structured_pattern:
    syntax: ^{termLabel} \[{termID}\]$
    interpolated: true
    partial_match: true
env_local_scale:
  annotations:
    Expected_value: Environmental entities having causal influences upon the entity
      at time of sampling
  description: 'Report the entity or entities which are in the sample or specimen
    s local vicinity and which you believe have significant causal influences on your
    sample or specimen. We recommend using EnvO terms which are of smaller spatial
    grain than your entry for env_broad_scale. Terms, such as anatomical sites, from
    other OBO Library ontologies which interoperate with EnvO (e.g. UBERON) are accepted
    in this field. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS'
  title: local environmental context
  examples:
  - value: hillside [ENVO:01000333]
  in_subset:
  - environment
  keywords:
  - context
  - environmental
  string_serialization: '{termLabel} [{termID}]'
  slot_uri: MIXS:0000013
  required: true
env_medium:
  description: 'Report the environmental material(s) immediately surrounding the sample
    or specimen at the time of sampling. We recommend using subclasses of ''environmental
    material'' (http://purl.obolibrary.org/obo/ENVO_00010483). EnvO documentation
    about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS
    . Terms from other OBO ontologies are permissible as long as they reference mass/volume
    nouns (e.g. air, water, blood) and not discrete, countable entities (e.g. a tree,
    a leaf, a table top)'
  title: environmental medium
  examples:
  - value: bluegrass field soil [ENVO:00005789]
  in_subset:
  - environment
  keywords:
  - environmental
  slot_uri: MIXS:0000014
  range: string
  required: true
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\]$
  structured_pattern:
    syntax: ^{termLabel} \[{termID}\]$
    interpolated: true
    partial_match: true
env_monitoring_zone:
  annotations:
    Expected_value: ENVO
  description: An environmental monitoring zone is a formal designation as part of
    an environmental monitoring program, in which areas of a food production facility
    are categorized, commonly as zones 1-4, based on likelihood or risk of foodborne
    pathogen contamination. This field accepts terms listed under food production
    environmental monitoring zone (http://purl.obolibrary.org/obo/ENVO). Please add
    a term to indicate the environmental monitoring zone the sample was taken from
  title: food production environmental monitoring zone
  examples:
  - value: Zone 1
  keywords:
  - environmental
  - food
  - production
  string_serialization: '{text}'
  slot_uri: MIXS:0001254
escalator:
  description: The number of escalators within the built structure
  title: escalator count
  examples:
  - value: '4'
  keywords:
  - count
  slot_uri: MIXS:0000800
  range: integer
estimated_size:
  annotations:
    Expected_value: number of base pairs
  description: The estimated size of the genome prior to sequencing. Of particular
    importance in the sequencing of (eukaryotic) genome which could remain in draft
    form for a long or unspecified period
  title: estimated size
  examples:
  - value: 300000 bp
  in_subset:
  - nucleic acid sequence source
  keywords:
  - size
  string_serialization: '{integer} bp'
  slot_uri: MIXS:0000024
ethnicity:
  annotations:
    Expected_value: text recommend from Wikipedia list
  description: A category of people who identify with each other, usually on the basis
    of presumed similarities such as a common language, ancestry, history, society,
    culture, nation or social treatment within their residing area. https://en.wikipedia.org/wiki/List_of_contemporary_ethnic_groups
  title: ethnicity
  examples:
  - value: native american
  string_serialization: '{text}'
  slot_uri: MIXS:0000895
  multivalued: true
ethylbenzene:
  annotations:
    Preferred_unit: milligram per liter, parts per million
  description: Concentration of ethylbenzene in the sample
  title: ethylbenzene
  slot_uri: MIXS:0000155
  range: string
  recommended: true
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
exp_duct:
  annotations:
    Preferred_unit: square meter
  description: The amount of exposed ductwork in the room
  title: exposed ductwork
  slot_uri: MIXS:0000144
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
exp_pipe:
  description: The number of exposed pipes in the room
  title: exposed pipes
  keywords:
  - pipes
  slot_uri: MIXS:0000220
  range: string
  pattern: ^[1-9][0-9]* ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{integer} {text}$
    interpolated: true
    partial_match: true
experimental_factor:
  annotations:
    Expected_value: text or EFO and/or OBI
  description: Variable aspects of an experiment design that can be used to describe
    an experiment, or set of experiments, in an increasingly detailed manner. This
    field accepts ontology terms from Experimental Factor Ontology (EFO) and/or Ontology
    for Biomedical Investigations (OBI)
  title: experimental factor
  examples:
  - value: time series design [EFO:0001779]
  in_subset:
  - investigation
  keywords:
  - experimental
  - factor
  string_serialization: '{termLabel} [{termID}]|{text}'
  slot_uri: MIXS:0000008
  multivalued: true
  range: string
  pattern: ^\S+.*\S+ \[[a-zA-Z]{2,}:\d+\]$
ext_door:
  description: The number of exterior doors in the built structure
  title: exterior door count
  keywords:
  - count
  - door
  - exterior
  slot_uri: MIXS:0000170
  range: integer
ext_wall_orient:
  description: The orientation of the exterior wall
  title: orientations of exterior wall
  examples:
  - value: northwest
  keywords:
  - exterior
  - wall
  slot_uri: MIXS:0000817
  range: CompassDirections8Enum
ext_window_orient:
  description: The compass direction the exterior window of the room is facing
  title: orientations of exterior window
  examples:
  - value: southwest
  keywords:
  - exterior
  - window
  slot_uri: MIXS:0000818
  range: CompassDirections8Enum
extr_weather_event:
  description: Unusual weather events that may have affected microbial populations.
    Multiple terms can be separated by pipes, listed in reverse chronological order
  title: extreme weather event
  examples:
  - value: hail
  keywords:
  - event
  - extreme
  - weather
  slot_uri: MIXS:0001141
  multivalued: true
  range: ExtrWeatherEventEnum
extrachrom_elements:
  description: Do plasmids exist of significant phenotypic consequence (e.g. ones
    that determine virulence or antibiotic resistance). Megaplasmids? Other plasmids
    (borrelia has 15+ plasmids)
  title: extrachromosomal elements
  examples:
  - value: '5'
  in_subset:
  - nucleic acid sequence source
  slot_uri: MIXS:0000023
  range: integer
extreme_event:
  description: Unusual physical events that may have affected microbial populations
  title: history/extreme events
  keywords:
  - event
  - history
  slot_uri: MIXS:0000320
  range: datetime
facility_type:
  description: Establishment details about the type of facility where the sample was
    taken. This is independent of the specific product(s) within the facility
  title: facility type
  examples:
  - value: manufacturing-processing
  keywords:
  - facility
  - type
  slot_uri: MIXS:0001252
  multivalued: true
  range: FacilityTypeEnum
fao_class:
  description: Soil classification from the FAO World Reference Database for Soil
    Resources. The list can be found at http://www.fao.org/nr/land/sols/soil/wrb-soil-maps/reference-groups
  title: soil_taxonomic/FAO classification
  examples:
  - value: Luvisols
  keywords:
  - classification
  slot_uri: MIXS:0001083
  range: FaoClassEnum
farm_equip:
  description: List of equipment used for planting, fertilization, harvesting, irrigation,
    land levelling, residue management, weeding or transplanting during the growing
    season.  This field accepts terms listed under agricultural implement (http://purl.obolibrary.org/obo/AGRO_00000416).
    Multiple terms can be separated by pipes
  title: farm equipment used
  examples:
  - value: combine harvester [AGRO:00000473]
  keywords:
  - equipment
  - farm
  - use
  slot_uri: MIXS:0001126
  multivalued: true
  range: string
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\]$
  structured_pattern:
    syntax: ^{termLabel} \[{termID}\]$
    interpolated: true
    partial_match: true
farm_equip_san:
  annotations:
    Expected_value: text or commercial name of sanitizer or class of sanitizer or
      active ingredient in sanitizer
    Preferred_unit: parts per million
  description: Method used to sanitize growing and harvesting equipment. This can
    including type and concentration of sanitizing solution.  Multiple terms can be
    separated by one or more pipes
  title: farm equipment sanitization
  examples:
  - value: hot water pressure wash, hypochlorite solution, 50 parts per million
  keywords:
  - equipment
  - farm
  string_serialization: '{text} {float} {unit}'
  slot_uri: MIXS:0001124
  multivalued: true
farm_equip_san_freq:
  description: The number of times farm equipment is cleaned. Frequency of cleaning
    might be on a Daily basis, Weekly, Monthly, Quarterly or Annually
  title: farm equipment sanitization frequency
  examples:
  - value: Biweekly
  keywords:
  - equipment
  - farm
  - frequency
  slot_uri: MIXS:0001125
  range: string
farm_equip_shared:
  description: List of planting, growing or harvesting equipment shared with other
    farms. This field accepts terms listed under agricultural implement (http://purl.obolibrary.org/obo/AGRO_00000416).
    Multiple terms can be separated by pipes
  title: equipment shared with other farms
  examples:
  - value: combine harvester [AGRO:00000473]
  keywords:
  - equipment
  - farm
  slot_uri: MIXS:0001123
  multivalued: true
  range: string
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\]$
  structured_pattern:
    syntax: ^{termLabel} \[{termID}\]$
    interpolated: true
    partial_match: true
farm_water_source:
  description: Source of water used on the farm for irrigation of crops or watering
    of livestock
  title: farm watering water source
  examples:
  - value: well
    description: was water well (ENVO:01000002)
  keywords:
  - farm
  - source
  - water
  slot_uri: MIXS:0001110
  range: FarmWaterSourceEnum
  recommended: true
feat_pred:
  description: Method used to predict UViGs features such as ORFs, integration site,
    etc
  title: feature prediction
  examples:
  - value: Prodigal;2.6.3;default parameters
  in_subset:
  - sequencing
  keywords:
  - feature
  - predict
  slot_uri: MIXS:0000061
  range: string
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+);([^\s-]{1,2}|[^\s-]+.+[^\s-]+);([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{software};{version};{parameters}$
    interpolated: true
    partial_match: true
ferm_chem_add:
  annotations:
    Expected_value: chemical ingredient
  description: Any chemicals that are added to the fermentation process to achieve
    the desired final product
  title: fermentation chemical additives
  examples:
  - value: salt
  keywords:
  - fermentation
  string_serialization: '{float} {unit}'
  slot_uri: MIXS:0001185
  multivalued: true
  recommended: true
ferm_chem_add_perc:
  annotations:
    Preferred_unit: percentage
  description: The amount of chemical added to the fermentation process
  title: fermentation chemical additives percentage
  examples:
  - value: '0.01'
  keywords:
  - fermentation
  - percent
  slot_uri: MIXS:0001186
  multivalued: true
  range: float
  recommended: true
ferm_headspace_oxy:
  annotations:
    Preferred_unit: percentage
  description: The amount of headspace oxygen in a fermentation vessel
  title: fermentation headspace oxygen
  examples:
  - value: '0.05'
  keywords:
  - fermentation
  - oxygen
  slot_uri: MIXS:0001187
  range: float
  recommended: true
ferm_medium:
  description: The growth medium used for the fermented food fermentation process,
    which supplies the required nutrients.  Usually this includes a carbon and nitrogen
    source, water, micronutrients and chemical additives
  title: fermentation medium
  examples:
  - value: molasses
  keywords:
  - fermentation
  slot_uri: MIXS:0001188
  range: string
  recommended: true
ferm_pH:
  description: The pH of the fermented food fermentation process
  title: fermentation pH
  examples:
  - value: '4.5'
  keywords:
  - fermentation
  - ph
  slot_uri: MIXS:0001189
  range: float
  recommended: true
ferm_rel_humidity:
  annotations:
    Preferred_unit: percentage
  description: The relative humidity of the fermented food fermentation process
  title: fermentation relative humidity
  comments:
  - percent or float?
  examples:
  - value: 95%
  keywords:
  - fermentation
  - humidity
  - relative
  slot_uri: MIXS:0001190
  range: string
  recommended: true
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
ferm_temp:
  annotations:
    Preferred_unit: degree Celsius
  description: The temperature of the fermented food fermentation process
  title: fermentation temperature
  examples:
  - value: 22 degrees Celsius
  keywords:
  - fermentation
  - temperature
  slot_uri: MIXS:0001191
  range: string
  recommended: true
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
ferm_time:
  annotations:
    Preferred_unit: days
  description: The time duration of the fermented food fermentation process
  title: fermentation time
  examples:
  - value: P10D
  keywords:
  - fermentation
  - time
  slot_uri: MIXS:0001192
  range: string
  recommended: true
  pattern: ^P(?:(?:\d+D|\d+M(?:\d+D)?|\d+Y(?:\d+M(?:\d+D)?)?)(?:T(?:\d+H(?:\d+M(?:\d+S)?)?|\d+M(?:\d+S)?|\d+S))?|T(?:\d+H(?:\d+M(?:\d+S)?)?|\d+M(?:\d+S)?|\d+S)|\d+W)$
  structured_pattern:
    syntax: ^{duration}$
    interpolated: true
    partial_match: true
ferm_vessel:
  description: The type of vessel used for containment of the fermentation
  title: fermentation vessel
  examples:
  - value: steel drum
  keywords:
  - fermentation
  slot_uri: MIXS:0001193
  range: string
  recommended: true
fertilizer_admin:
  description: Type of fertilizer or amendment added to the soil or water for the
    purpose of improving substrate health and quality for plant growth. This field
    accepts terms listed under agronomic fertilizer (http://purl.obolibrary.org/obo/AGRO_00002062).
    Multiple terms may apply and can be separated by pipes, listing in reverse chronological
    order
  title: fertilizer administration
  examples:
  - value: fish emulsion [AGRO:00000082]
  keywords:
  - administration
  slot_uri: MIXS:0001127
  range: string
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\]$
  structured_pattern:
    syntax: ^{termLabel} \[{termID}\]$
    interpolated: true
    partial_match: true
fertilizer_date:
  description: Date of administration of soil amendment or fertilizer. Multiple terms
    may apply and can be separated by pipes, listing in reverse chronological order
  title: fertilizer administration date
  examples:
  - value: '2018-05-11T10:00:00+01:00'
  keywords:
  - administration
  - date
  slot_uri: MIXS:0001128
  range: datetime
fertilizer_regm:
  annotations:
    Expected_value: fertilizer name;fertilizer amount;treatment interval and duration
    Preferred_unit: gram, mole per liter, milligram per liter
  description: Information about treatment involving the use of fertilizers; should
    include the name of fertilizer, amount administered, treatment regimen including
    how many times the treatment was repeated, how long each treatment lasted, and
    the start and end time of the entire treatment; can include multiple fertilizer
    regimens
  title: fertilizer regimen
  examples:
  - value: urea;0.6 milligram per liter;R2/2018-05-11:T14:30/2018-05-11T19:30/P1H30M
  keywords:
  - regimen
  string_serialization: '{text};{float} {unit};{Rn/start_time/end_time/duration}'
  slot_uri: MIXS:0000556
  multivalued: true
field:
  description: Name of the hydrocarbon field (e.g. Albacora)
  title: field name
  slot_uri: MIXS:0000291
  range: string
  recommended: true
filter_type:
  description: A device which removes solid particulates or airborne molecular contaminants
  title: filter type
  examples:
  - value: HEPA
  keywords:
  - filter
  - type
  slot_uri: MIXS:0000765
  multivalued: true
  range: FilterTypeEnum
  required: true
fire:
  description: Historical and/or physical evidence of fire
  title: history/fire
  keywords:
  - history
  slot_uri: MIXS:0001086
  range: datetime
fireplace_type:
  description: A firebox with chimney
  title: fireplace type
  examples:
  - value: wood burning
  keywords:
  - type
  slot_uri: MIXS:0000802
  range: FireplaceTypeEnum
flooding:
  description: Historical and/or physical evidence of flooding
  title: history/flooding
  keywords:
  - history
  slot_uri: MIXS:0000319
  range: datetime
floor_age:
  annotations:
    Preferred_unit: years, weeks, days
  description: The time period since installment of the carpet or flooring
  title: floor age
  keywords:
  - age
  - floor
  slot_uri: MIXS:0000164
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
floor_area:
  annotations:
    Preferred_unit: square meter
  description: The area of the floor space within the room
  title: floor area
  keywords:
  - area
  - floor
  slot_uri: MIXS:0000165
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
floor_cond:
  description: The physical condition of the floor at the time of sampling; photos
    or video preferred; use drawings to indicate location of damaged areas
  title: floor condition
  examples:
  - value: new
  keywords:
  - condition
  - floor
  slot_uri: MIXS:0000803
  range: DamagedEnum
floor_count:
  description: The number of floors in the building, including basements and mechanical
    penthouse
  title: floor count
  keywords:
  - count
  - floor
  slot_uri: MIXS:0000225
  range: integer
floor_finish_mat:
  annotations:
    Expected_value: enumeration
  description: The floor covering type; the finished surface that is walked on
  title: floor finish material
  examples:
  - value: carpet
  keywords:
  - floor
  - material
  string_serialization: '[tile|wood strip or parquet|carpet|rug|laminate wood|lineoleum|vinyl
    composition tile|sheet vinyl|stone|bamboo|cork|terrazo|concrete|none;specify unfinished|sealed|clear
    finish|paint]'
  slot_uri: MIXS:0000804
floor_struc:
  description: Refers to the structural elements and subfloor upon which the finish
    flooring is installed
  title: floor structure
  examples:
  - value: concrete
  keywords:
  - floor
  slot_uri: MIXS:0000806
  range: FloorStrucEnum
floor_thermal_mass:
  annotations:
    Preferred_unit: joule per degree Celsius
  description: The ability of the floor to provide inertia against temperature fluctuations
  title: floor thermal mass
  keywords:
  - floor
  - mass
  slot_uri: MIXS:0000166
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
floor_water_mold:
  description: Signs of the presence of mold or mildew in a room
  title: floor signs of water/mold
  examples:
  - value: ceiling discoloration
  keywords:
  - floor
  slot_uri: MIXS:0000805
  range: FloorWaterMoldEnum
fluor:
  annotations:
    Preferred_unit: milligram chlorophyll a per cubic meter, volts
  description: Raw or converted fluorescence of water
  title: fluorescence
  examples:
  - value: 2.5 volts
  slot_uri: MIXS:0000704
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
foetal_health_stat:
  description: Specification of foetal health status, should also include abortion
  title: amniotic fluid/foetal health status
  keywords:
  - status
  slot_uri: MIXS:0000275
  range: string
food_additive:
  annotations:
    Expected_value: FOODON:03412972
  description: A substance or substances added to food to maintain or improve safety
    and freshness, to improve or maintain nutritional value, or improve taste, texture
    and appearance.  This field accepts terms listed under food additive (http://purl.obolibrary.org/obo/FOODON_03412972).
    Multiple terms can be separated by one or more pipes, but please consider limiting
    this list to the top 5 ingredients listed in order as on the food label.  See
    also, https://www.fda.gov/food/food-ingredients-packaging/overview-food-ingredients-additives-colors
  title: food additive
  examples:
  - value: xanthan gum [FOODON:03413321]
  keywords:
  - food
  string_serialization: '{text}|{termLabel} [{termID}]'
  slot_uri: MIXS:0001200
  multivalued: true
food_allergen_label:
  annotations:
    Expected_value: FOODON:03510213
  description: A label indication that the product contains a recognized allergen.
    This field accepts terms listed under dietary claim or use (http://purl.obolibrary.org/obo/FOODON_03510213)
  title: food allergen labeling
  examples:
  - value: food allergen labelling about crustaceans and products thereof [FOODON:03510215]
  keywords:
  - food
  string_serialization: '{text}|{termLabel} [{termID}]'
  slot_uri: MIXS:0001201
  multivalued: true
food_clean_proc:
  description: The process of cleaning food to separate other environmental materials
    from the food source. Multiple terms can be separated by pipes
  title: food cleaning process
  examples:
  - value: rinsed with water
    description: was rinsed with water|scrubbed with brush
  - value: scrubbed with brush
    description: was rinsed with water|scrubbed with brush
  keywords:
  - food
  - process
  slot_uri: MIXS:0001182
  range: FoodCleanProcEnum
food_contact_surf:
  annotations:
    Expected_value: FOODON:03500010
  description: The specific container or coating materials in direct contact with
    the food. Multiple values can be assigned.  This field accepts terms listed under
    food contact surface (http://purl.obolibrary.org/obo/FOODON_03500010)
  title: food contact surface
  examples:
  - value: cellulose acetate [FOODON:03500034]
  keywords:
  - food
  - surface
  string_serialization: '{text}|{termLabel} [{termID}]'
  slot_uri: MIXS:0001131
  multivalued: true
food_contain_wrap:
  annotations:
    Expected_value: FOODON:03490100
  description: Type of container or wrapping defined by the main container material,
    the container form, and the material of the liner lids or ends. Also type of container
    or wrapping by form; prefer description by material first, then by form. This
    field accepts terms listed under food container or wrapping (http://purl.obolibrary.org/obo/FOODON_03490100)
  title: food container or wrapping
  examples:
  - value: Plastic shrink-pack [FOODON:03490137]
  keywords:
  - food
  string_serialization: '{text}|{termLabel} [{termID}]'
  slot_uri: MIXS:0001132
food_cooking_proc:
  annotations:
    Expected_value: FOODON:03450002
  description: The transformation of raw food by the application of heat. This field
    accepts terms listed under food cooking (http://purl.obolibrary.org/obo/FOODON_03450002)
  title: food cooking process
  examples:
  - value: food blanching [FOODON:03470175]
  keywords:
  - food
  - process
  string_serialization: '{text}|{termLabel} [{termID}]'
  slot_uri: MIXS:0001202
  multivalued: true
food_dis_point:
  description: 'A reference to a place on the Earth, by its name or by its geographical
    location that refers to a distribution point along the food chain. This field
    accepts terms listed under geographic location (http://purl.obolibrary.org/obo/GAZ_00000448).
    Reference: Adam Diamond, James Barham. Moving Food Along the Value Chain: Innovations
    in Regional Food Distribution. U.S. Dept. of Agriculture, Agricultural Marketing
    Service. Washington, DC. March 2012. http://dx.doi.org/10.9752/MS045.03-2012'
  title: food distribution point geographic location
  examples:
  - value: 'USA: Delmarva, Peninsula'
  keywords:
  - food
  - geographic
  - location
  slot_uri: MIXS:0001203
  multivalued: true
  range: string
  pattern: '^([^\s-]{1,2}|[^\s-]+.+[^\s-]+): ([^\s-]{1,2}|[^\s-]+.+[^\s-]+), ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$'
  structured_pattern:
    syntax: '^{text}: {text}, {text}$'
    interpolated: true
    partial_match: true
food_dis_point_city:
  annotations:
    Expected_value: GAZ:00000448
  description: 'A reference to a place on the Earth, by its name or by its geographical
    location that refers to a distribution point along the food chain. This field
    accepts terms listed under geographic location (http://purl.obolibrary.org/obo/GAZ_00000448).
    Reference: Adam Diamond, James Barham. Moving Food Along the Value Chain: Innovations
    in Regional Food Distribution. U.S. Dept. of Agriculture, Agricultural Marketing
    Service. Washington, DC. March 2012. http://dx.doi.org/10.9752/MS045.03-2012'
  title: food distribution point geographic location (city)
  examples:
  - value: Atlanta[GAZ:00004445]
  keywords:
  - food
  - geographic
  - location
  string_serialization: '{text}|{termLabel} [{termID}]'
  slot_uri: MIXS:0001204
  multivalued: true
food_harvest_proc:
  description: A harvesting process is a process which takes in some food material
    from an individual or community of plant or animal organisms in a given context
    and time, and outputs a precursor or consumable food product. This may include
    a part of an organism or the whole, and may involve killing the organism
  title: Food harvesting process
  examples:
  - value: hand-picked
  keywords:
  - food
  - process
  slot_uri: MIXS:0001133
  multivalued: true
  range: string
food_ingredient:
  annotations:
    Expected_value: FOODON
  description: In this field, please list individual ingredients for multi-component
    food [FOODON:00002501] and simple foods that is not captured in food_type.  Please
    use terms that are present in FoodOn.  Multiple terms can be separated by one
    or more pipes |, but please consider limiting this list to the top 5 ingredients
    listed in order as on the food label.  See also, https://www.fda.gov/food/food-ingredients-packaging/overview-food-ingredients-additives-colors
  title: food ingredient
  examples:
  - value: bean (whole) [FOODON:00002753]
  keywords:
  - food
  - ingredient
  string_serialization: '{text}|{termLabel} [{termID}]'
  slot_uri: MIXS:0001205
  multivalued: true
food_name_status:
  description: A datum indicating that use of a food product name is regulated in
    some legal jurisdiction. This field accepts terms listed under food product name
    legal status (http://purl.obolibrary.org/obo/FOODON_03530087)
  title: food product name legal status
  examples:
  - value: protected geographic indication [FOODON:03530256]
  keywords:
  - food
  - product
  - status
  slot_uri: MIXS:0001206
  range: string
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\]$
  structured_pattern:
    syntax: ^{termLabel} \[{termID}\]$
    interpolated: true
    partial_match: true
food_origin:
  description: A reference to a place on the Earth, by its name or by its geographical
    location that describes the origin of the food commodity, either in terms of its
    cultivation or production. This field accepts terms listed under geographic location
    (http://purl.obolibrary.org/obo/GAZ_00000448)
  title: food product origin geographic location
  examples:
  - value: 'USA: Delmarva, Peninsula'
  keywords:
  - food
  - geographic
  - location
  - product
  slot_uri: MIXS:0001207
  range: string
  pattern: '^([^\s-]{1,2}|[^\s-]+.+[^\s-]+): ([^\s-]{1,2}|[^\s-]+.+[^\s-]+), ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$'
  structured_pattern:
    syntax: '^{text}: {text}, {text}$'
    interpolated: true
    partial_match: true
food_pack_capacity:
  annotations:
    Preferred_unit: grams
  description: The maximum number of product units within a package
  title: food package capacity
  examples:
  - value: 454 grams
  keywords:
  - food
  - package
  slot_uri: MIXS:0001208
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
food_pack_integrity:
  annotations:
    Expected_value: FOODON:03530218
  description: A term label and term id to describe the state of the packing material
    and text to explain the exact condition.  This field accepts terms listed under
    food packing medium integrity (http://purl.obolibrary.org/obo/FOODON_03530218)
  title: food packing medium integrity
  examples:
  - value: food packing medium compromised [FOODON:00002517]
  keywords:
  - food
  string_serialization: '{text}|{termLabel} [{termID}]'
  slot_uri: MIXS:0001209
  multivalued: true
food_pack_medium:
  annotations:
    Expected_value: FOODON:03480020
  description: The medium in which the food is packed for preservation and handling
    or the medium surrounding homemade foods, e.g., peaches cooked in sugar syrup.
    The packing medium may provide a controlled environment for the food. It may also
    serve to improve palatability and consumer appeal.  This includes edible packing
    media (e.g. fruit juice), gas other than air (e.g. carbon dioxide), vacuum packed,
    or packed with aerosol propellant. This field accepts terms under food packing
    medium (http://purl.obolibrary.org/obo/FOODON_03480020). Multiple terms may apply
    and can be separated by pipes
  title: food packing medium
  keywords:
  - food
  string_serialization: '{text}|{termLabel} [{termID}]'
  slot_uri: MIXS:0001134
  multivalued: true
food_preserv_proc:
  annotations:
    Expected_value: FOODON:03470107
  description: The methods contributing to the prevention or retardation of microbial,
    enzymatic or oxidative spoilage and thus to the extension of shelf life. This
    field accepts terms listed under food preservation process (http://purl.obolibrary.org/obo/FOODON_03470107)
  title: food preservation process
  examples:
  - value: food slow freezing [FOODON:03470128]
  keywords:
  - food
  - process
  string_serialization: '{text}|{termLabel} [{termID}]'
  slot_uri: MIXS:0001135
  multivalued: true
food_prior_contact:
  annotations:
    Expected_value: FOODON:03530077
  description: The material the food contacted (e.g., was processed in) prior to packaging.
    This field accepts terms listed under material of contact prior to food packaging
    (http://purl.obolibrary.org/obo/FOODON_03530077). If the proper descriptor is
    not listed please use text to describe the material of contact prior to food packaging
  title: material of contact prior to food packaging
  examples:
  - value: processed in stainless steel container [FOODON:03530081]
  keywords:
  - food
  - material
  - prior
  string_serialization: '{text}|{termLabel} [{termID}]'
  slot_uri: MIXS:0001210
  multivalued: true
food_prod:
  description: Descriptors of the food production system or of the agricultural environment
    and growing conditions related to the farm production system, such as wild caught,
    organic, free-range, industrial, dairy, beef,  domestic or cultivated food production.
    This field accepts terms listed under food production (http://purl.obolibrary.org/obo/FOODON_03530206).
    Multiple terms may apply and can be separated by pipes
  title: food production system characteristics
  examples:
  - value: organic plant cultivation [FOODON:03530253]
  keywords:
  - food
  - production
  slot_uri: MIXS:0001211
  multivalued: true
  range: string
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\]$
  structured_pattern:
    syntax: ^{termLabel} \[{termID}\]$
    interpolated: true
    partial_match: true
food_prod_char:
  description: Descriptors of the food production system such as wild caught, free-range,
    organic, free-range, industrial, dairy, beef
  title: food production characteristics
  examples:
  - value: wild caught
  keywords:
  - food
  - production
  slot_uri: MIXS:0001136
  multivalued: true
  range: string
food_prod_synonym:
  description: Other names by which the food product is known by (e.g., regional or
    non-English names)
  title: food product synonym
  examples:
  - value: pinot gris
  keywords:
  - food
  - product
  slot_uri: MIXS:0001212
  multivalued: true
  range: string
food_product_qual:
  description: Descriptors for describing food visually or via other senses, which
    is useful for tasks like food inspection where little prior knowledge of how the
    food came to be is available. Some terms like "food (frozen)" are both a quality
    descriptor and the output of a process. This field accepts terms listed under
    food product by quality (http://purl.obolibrary.org/obo/FOODON_00002454)
  title: food product by quality
  examples:
  - value: raw [FOODON:03311126]
  keywords:
  - food
  - product
  - quality
  slot_uri: MIXS:0001213
  range: string
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\]$
  structured_pattern:
    syntax: ^{termLabel} \[{termID}\]$
    interpolated: true
    partial_match: true
food_product_type:
  annotations:
    Expected_value: FOODON:00001002 or FOODON:03309997
  description: A food product type is a class of food products that is differentiated
    by its food composition (e.g., single- or multi-ingredient), processing and/or
    consumption characteristics. This does not include brand name products but it
    may include generic food dish categories. This field accepts terms under food
    product type (http://purl.obolibrary.org/obo/FOODON:03400361). For terms related
    to food product for an animal, consult food product for animal (http://purl.obolibrary.org/obo/FOODON_03309997).
    If the proper descriptor is not listed please use text to describe the food type.
    Multiple terms can be separated by one or more pipes
  title: food product type
  keywords:
  - food
  - product
  - type
  string_serialization: '{text}|{termLabel} [{termID}]'
  slot_uri: MIXS:0001184
food_quality_date:
  annotations:
    Expected_value: enumeration, date
  description: The date recommended for the use of the product while at peak quality,
    this date is not a reflection of safety unless used on infant formula this date
    is not a reflection of safety and is typically labeled on a food product as "best
    if used by," best by," "use by," or "freeze by."
  title: food quality date
  examples:
  - value: best by 2020-05-24
  keywords:
  - date
  - food
  - quality
  string_serialization: '[best by|best if used by|freeze by|use by]; date'
  slot_uri: MIXS:0001178
food_source:
  annotations:
    Expected_value: FOODON term
  description: Type of plant or animal from which the food product or its major ingredient
    is derived or a chemical food source [FDA CFSAN 1995]
  title: food source
  keywords:
  - food
  - source
  string_serialization: '{termLabel} [{termID}]'
  slot_uri: MIXS:0001139
food_source_age:
  annotations:
    Preferred_unit: days
  description: The age of the food source host organim. Depending on the type of host
    organism, age may be more appropriate to report in days, weeks, or years
  title: food source age
  comments:
  - ISO 8601 period or measurement value?
  examples:
  - value: 6 months
  keywords:
  - age
  - food
  - source
  slot_uri: MIXS:0001251
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
food_trace_list:
  description: The FDA is proposing to establish additional traceability recordkeeping
    requirements (beyond what is already required in existing regulations) for persons
    who manufacture, process, pack, or hold foods the Agency has designated for inclusion
    on the Food Traceability List. The Food Traceability List (FTL) identifies the
    foods for which the additional traceability records described in the proposed
    rule would be required. The term  Food Traceability List  (FTL) refers not only
    to the foods specifically listed (https://www.fda.gov/media/142303/download),
    but also to any foods that contain listed foods as ingredients
  title: food traceability list category
  examples:
  - value: tropical tree fruits
  keywords:
  - food
  slot_uri: MIXS:0001214
  range: FoodTraceListEnum
food_trav_mode:
  description: A descriptor for the method of movement of food commodity along the
    food distribution system.  This field accepts terms listed under travel mode (http://purl.obolibrary.org/obo/GENEPIO_0001064).
    If the proper descrptor is not listed please use text to describe the mode of
    travel. Multiple terms can be separated by one or more pipes
  title: food shipping transportation method
  examples:
  - value: train travel [GENEPIO:0001060]
  keywords:
  - food
  - method
  - transport
  slot_uri: MIXS:0001137
  multivalued: true
  range: string
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\]$
  structured_pattern:
    syntax: ^{termLabel} \[{termID}\]$
    interpolated: true
    partial_match: true
food_trav_vehic:
  annotations:
    Expected_value: ENVO:01000604
  description: A descriptor for the mobile machine which is used to transport food
    commodities along the food distribution system.  This field accepts terms listed
    under vehicle (http://purl.obolibrary.org/obo/ENVO_01000604). If the proper descrptor
    is not listed please use text to describe the mode of travel. Multiple terms can
    be separated by one or more pipes
  title: food shipping transportation vehicle
  examples:
  - value: aircraft [ENVO:01001488]|car [ENVO:01000605]
  keywords:
  - food
  - transport
  string_serialization: '{text}|{termLabel} [{termID}]'
  slot_uri: MIXS:0001138
  multivalued: true
food_treat_proc:
  annotations:
    Expected_value: FOODON:03460111
  description: Used to specifically characterize a food product based on the treatment
    or processes applied to the product or any indexed ingredient. The processes include
    adding, substituting or removing components or modifying the food or component,
    e.g., through fermentation. Multiple values can be assigned. This fields accepts
    terms listed under food treatment process (http://purl.obolibrary.org/obo/FOODON_03460111)
  title: food treatment process
  examples:
  - value: gluten removal process [FOODON:03460750]
  keywords:
  - food
  - process
  - treatment
  string_serialization: '{text}|{termLabel} [{termID}]'
  slot_uri: MIXS:0001140
  multivalued: true
freq_clean:
  description: The number of times the sample location is cleaned. Frequency of cleaning
    might be on a Daily basis, Weekly, Monthly, Quarterly or Annually
  title: frequency of cleaning
  examples:
  - value: Daily
  keywords:
  - frequency
  slot_uri: MIXS:0000226
  range: FreqCleanEnum
freq_cook:
  description: The number of times a meal is cooked per week
  title: frequency of cooking
  keywords:
  - frequency
  slot_uri: MIXS:0000227
  range: string
  pattern: ^[1-9][0-9]* ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{integer} {text}$
    interpolated: true
    partial_match: true
fungicide_regm:
  annotations:
    Preferred_unit: gram, mole per liter, milligram per liter
  description: Information about treatment involving use of fungicides; should include
    the name of fungicide, amount administered, treatment regimen including how many
    times the treatment was repeated, how long each treatment lasted, and the start
    and end time of the entire treatment; can include multiple fungicide regimens
  title: fungicide regimen
  examples:
  - value: bifonazole;1 mole per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M
  keywords:
  - regimen
  slot_uri: MIXS:0000557
  multivalued: true
  range: string
furniture:
  description: The types of furniture present in the sampled room
  title: furniture
  examples:
  - value: chair
  slot_uri: MIXS:0000807
  range: FurnitureEnum
gaseous_environment:
  annotations:
    Preferred_unit: micromole per liter
  description: Use of conditions with differing gaseous environments; should include
    the name of gaseous compound, amount administered, treatment duration, interval
    and total experimental duration; can include multiple gaseous environment regimens
  title: gaseous environment
  examples:
  - value: nitric oxide;0.5 micromole per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M
  keywords:
  - environment
  slot_uri: MIXS:0000558
  multivalued: true
  range: string
gaseous_substances:
  annotations:
    Expected_value: gaseous substance name;measurement value
    Preferred_unit: micromole per liter
  description: Amount or concentration of substances such as hydrogen sulfide, carbon
    dioxide, methane, etc.; can include multiple substances
  title: gaseous substances
  string_serialization: '{text};{float} {unit}'
  slot_uri: MIXS:0000661
  multivalued: true
gastrointest_disord:
  description: History of gastrointestinal tract disorders; can include multiple disorders.
    History of blood disorders; can include multiple disorders.  The terms should
    be chosen from the DO (Human Disease Ontology) at http://www.disease-ontology.org,
    gastrointestinal system disease (https://disease-ontology.org/?id=DOID:77)
  title: gastrointestinal tract disorder
  keywords:
  - disorder
  slot_uri: MIXS:0000280
  multivalued: true
  range: string
gender_restroom:
  description: The gender type of the restroom
  title: gender of restroom
  examples:
  - value: male
  slot_uri: MIXS:0000808
  range: GenderRestroomEnum
genetic_mod:
  annotations:
    Expected_value: PMID, DOI, URL or text
  description: Genetic modifications of the genome of an organism, which may occur
    naturally by spontaneous mutation, or be introduced by some experimental means,
    e.g. specification of a transgene or the gene knocked-out or details of transient
    transfection
  title: genetic modification
  examples:
  - value: aox1A transgenic
  string_serialization: '{PMID}|{DOI}|{URL}'
  slot_uri: MIXS:0000859
geo_loc_name:
  description: The geographical origin of the sample as defined by the country or
    sea name followed by specific region name. Country or sea names should be chosen
    from the INSDC country list (http://insdc.org/country.html), or the GAZ ontology
    (http://purl.bioontology.org/ontology/GAZ)
  title: geographic location (country and/or sea,region)
  examples:
  - value: 'USA: Maryland, Bethesda'
  in_subset:
  - environment
  keywords:
  - geographic
  - location
  slot_uri: MIXS:0000010
  range: string
  required: true
  pattern: '^([^\s-]{1,2}|[^\s-]+.+[^\s-]+): ([^\s-]{1,2}|[^\s-]+.+[^\s-]+), ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$'
  structured_pattern:
    syntax: '^{text}: {text}, {text}$'
    interpolated: true
    partial_match: true
gestation_state:
  description: Specification of the gestation state
  title: amniotic fluid/gestation state
  slot_uri: MIXS:0000272
  range: string
glucosidase_act:
  annotations:
    Preferred_unit: mol per liter per hour
  description: Measurement of glucosidase activity
  title: glucosidase activity
  examples:
  - value: 5 mol per liter per hour
  slot_uri: MIXS:0000137
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
gravidity:
  description: Whether or not subject is gravid, and if yes date due or date post-conception,
    specifying which is used
  title: gravidity
  examples:
  - value: yes;due date:2018-05-11
  string_serialization: '{boolean};{timestamp}'
  slot_uri: MIXS:0000875
gravity:
  annotations:
    Expected_value: gravity factor value;treatment interval and duration
    Preferred_unit: meter per square second, g
  description: Information about treatment involving use of gravity factor to study
    various types of responses in presence, absence or modified levels of gravity;
    treatment regimen including how many times the treatment was repeated, how long
    each treatment lasted, and the start and end time of the entire treatment; can
    include multiple treatments
  title: gravity
  examples:
  - value: 12 g;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M
  string_serialization: '{float} {unit};{Rn/start_time/end_time/duration}'
  slot_uri: MIXS:0000559
  multivalued: true
growth_facil:
  annotations:
    Expected_value: free text or CO
  description: 'Type of facility where the sampled plant was grown; controlled vocabulary:
    growth chamber, open top chamber, glasshouse, experimental garden, field. Alternatively
    use Crop Ontology (CO) terms, see http://www.cropontology.org/ontology/CO_715/Crop%20Research'
  title: growth facility
  examples:
  - value: Growth chamber [CO_715:0000189]
  keywords:
  - facility
  - growth
  string_serialization: '{text}|{termLabel} [{termID}]'
  slot_uri: MIXS:0001043
growth_habit:
  description: Characteristic shape, appearance or growth form of a plant species
  title: growth habit
  examples:
  - value: spreading
  keywords:
  - growth
  slot_uri: MIXS:0001044
  range: GrowthHabitEnum
growth_hormone_regm:
  annotations:
    Expected_value: growth hormone name;growth hormone amount;treatment interval and
      duration
    Preferred_unit: gram, mole per liter, milligram per liter
  description: Information about treatment involving use of growth hormones; should
    include the name of growth hormone, amount administered, treatment regimen including
    how many times the treatment was repeated, how long each treatment lasted, and
    the start and end time of the entire treatment; can include multiple growth hormone
    regimens
  title: growth hormone regimen
  examples:
  - value: abscisic acid;0.5 milligram per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M
  keywords:
  - growth
  - regimen
  string_serialization: '{text};{float} {unit};{Rn/start_time/end_time/duration}'
  slot_uri: MIXS:0000560
  multivalued: true
growth_medium:
  description: A liquid or gel containing nutrients, salts, and other factors formulated
    to support the growth of microorganisms, cells, or plants (National Cancer Institute
    Thesaurus).  The name of the medium used to grow the microorganism
  title: growth medium
  examples:
  - value: LB broth
  keywords:
  - growth
  slot_uri: MIXS:0001108
  range: string
gynecologic_disord:
  description: History of gynecological disorders; can include multiple disorders.
    The terms should be chosen from the DO (Human Disease Ontology) at http://www.disease-ontology.org,
    female reproductive system disease (https://disease-ontology.org/?id=DOID:229)
  title: gynecological disorder
  keywords:
  - disorder
  slot_uri: MIXS:0000288
  multivalued: true
  range: string
hall_count:
  description: The total count of hallways and cooridors in the built structure
  title: hallway/corridor count
  keywords:
  - corridor
  - count
  - hallway
  slot_uri: MIXS:0000228
  range: integer
handidness:
  description: The handidness of the individual sampled
  title: handidness
  examples:
  - value: right handedness
  slot_uri: MIXS:0000809
  range: HandidnessEnum
hc_produced:
  description: Main hydrocarbon type produced from resource (i.e. Oil, gas, condensate,
    etc). If "other" is specified, please propose entry in "additional info" field
  title: hydrocarbon type produced
  examples:
  - value: Gas
  keywords:
  - hydrocarbon
  - type
  slot_uri: MIXS:0000989
  range: HcProducedEnum
  required: true
hcr:
  description: Main Hydrocarbon Resource type. The term "Hydrocarbon Resource" HCR
    defined as a natural environmental feature containing large amounts of hydrocarbons
    at high concentrations potentially suitable for commercial exploitation. This
    term should not be confused with the Hydrocarbon Occurrence term which also includes
    hydrocarbon-rich environments with currently limited commercial interest such
    as seeps, outcrops, gas hydrates etc. If "other" is specified, please propose
    entry in "additional info" field
  title: hydrocarbon resource type
  examples:
  - value: Oil Sand
  keywords:
  - hydrocarbon
  - resource
  - type
  slot_uri: MIXS:0000988
  range: HcrEnum
  required: true
hcr_fw_salinity:
  annotations:
    Preferred_unit: milligram per liter
  description: Original formation water salinity (prior to secondary recovery e.g.
    Waterflooding) expressed as TDS
  title: formation water salinity
  keywords:
  - salinity
  - water
  slot_uri: MIXS:0000406
  range: string
  recommended: true
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
hcr_geol_age:
  description: 'Geological age of hydrocarbon resource (Additional info: https://en.wikipedia.org/wiki/Period_(geology)).
    If "other" is specified, please propose entry in "additional info" field'
  title: hydrocarbon resource geological age
  examples:
  - value: Silurian
  keywords:
  - age
  - hydrocarbon
  - resource
  slot_uri: MIXS:0000993
  range: GeolAgeEnum
  recommended: true
hcr_pressure:
  annotations:
    Preferred_unit: atmosphere, kilopascal
  description: Original pressure of the hydrocarbon resource
  title: hydrocarbon resource original pressure
  keywords:
  - hydrocarbon
  - pressure
  - resource
  slot_uri: MIXS:0000395
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+ *- *[-+]?[0-9]*\.?[0-9]+ ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{float} *- *{float} {unit}$
    interpolated: true
    partial_match: true
hcr_temp:
  annotations:
    Preferred_unit: degree Celsius
  description: Original temperature of the hydrocarbon resource
  title: hydrocarbon resource original temperature
  examples:
  - value: 150-295 degree Celsius
  keywords:
  - hydrocarbon
  - resource
  - temperature
  slot_uri: MIXS:0000393
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+ *- *[-+]?[0-9]*\.?[0-9]+ ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{float} *- *{float} {unit}$
    interpolated: true
    partial_match: true
heat_cool_type:
  description: Methods of conditioning or heating a room or building
  title: heating and cooling system type
  examples:
  - value: heat pump
  keywords:
  - type
  slot_uri: MIXS:0000766
  multivalued: true
  range: HeatCoolTypeEnum
  required: true
heat_deliv_loc:
  description: The location of heat delivery within the room
  title: heating delivery locations
  examples:
  - value: north
  keywords:
  - delivery
  - location
  - locations
  slot_uri: MIXS:0000810
  range: CompassDirections8Enum
heat_sys_deliv_meth:
  description: The method by which the heat is delivered through the system
  title: heating system delivery method
  examples:
  - value: radiant
  keywords:
  - delivery
  - method
  slot_uri: MIXS:0000812
  range: HeatSysDelivMethEnum
heat_system_id:
  description: The heating system identifier
  title: heating system identifier
  keywords:
  - identifier
  slot_uri: MIXS:0000833
  range: integer
heavy_metals:
  annotations:
    Expected_value: heavy metal name;measurement value unit
    Preferred_unit: microgram per gram
  description: Heavy metals present in the sequenced sample and their concentrations.
    For multiple heavy metals and concentrations, add multiple copies of this field
  title: extreme_unusual_properties/heavy metals
  examples:
  - value: mercury;0.09 micrograms per gram
  keywords:
  - extreme
  - properties
  - unusual
  string_serialization: '{text};{float} {unit}'
  slot_uri: MIXS:0000652
  multivalued: true
heavy_metals_meth:
  description: Reference or method used in determining heavy metals
  title: extreme_unusual_properties/heavy metals method
  keywords:
  - extreme
  - method
  - properties
  - unusual
  slot_uri: MIXS:0000343
  range: string
  pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$$
  structured_pattern:
    syntax: ^{PMID}|{DOI}|{URL}$
    interpolated: true
    partial_match: true
height_carper_fiber:
  annotations:
    Preferred_unit: centimeter
  description: The average carpet fiber height in the indoor environment
  title: height carpet fiber mat
  keywords:
  - height
  slot_uri: MIXS:0000167
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
herbicide_regm:
  annotations:
    Preferred_unit: gram, mole per liter, milligram per liter
  description: Information about treatment involving use of herbicides; information
    about treatment involving use of growth hormones; should include the name of herbicide,
    amount administered, treatment regimen including how many times the treatment
    was repeated, how long each treatment lasted, and the start and end time of the
    entire treatment; can include multiple regimens
  title: herbicide regimen
  examples:
  - value: atrazine;10 milligram per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M
  keywords:
  - regimen
  slot_uri: MIXS:0000561
  multivalued: true
  range: string
horizon_meth:
  description: Reference or method used in determining the horizon
  title: horizon method
  keywords:
  - horizon
  - method
  slot_uri: MIXS:0000321
  range: string
  pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$$
  structured_pattern:
    syntax: ^{PMID}|{DOI}|{URL}$
    interpolated: true
    partial_match: true
host_age:
  annotations:
    Preferred_unit: year, day, hour
  description: Age of host at the time of sampling; relevant scale depends on species
    and study, e.g. Could be seconds for amoebae or centuries for trees
  title: host age
  keywords:
  - age
  - host
  - host.
  slot_uri: MIXS:0000255
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
host_body_habitat:
  description: Original body habitat where the sample was obtained from
  title: host body habitat
  keywords:
  - body
  - habitat
  - host
  - host.
  slot_uri: MIXS:0000866
  range: string
host_body_mass_index:
  annotations:
    Preferred_unit: kilogram per square meter
  description: Body mass index, calculated as weight/(height)squared
  title: host body-mass index
  examples:
  - value: 22 kilogram per square meter
  keywords:
  - host
  - host.
  slot_uri: MIXS:0000317
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
host_body_product:
  annotations:
    Expected_value: FMA or UBERON
  description: Substance produced by the body, e.g. Stool, mucus, where the sample
    was obtained from. Use terms from the foundational model of anatomy ontology (fma)
    or Uber-anatomy ontology (UBERON)
  title: host body product
  examples:
  - value: mucus [FMA:66938]
  keywords:
  - body
  - host
  - host.
  - product
  string_serialization: '{termLabel} [{termID}]'
  slot_uri: MIXS:0000888
host_body_site:
  annotations:
    Expected_value: FMA or UBERON
  description: Name of body site where the sample was obtained from, such as a specific
    organ or tissue (tongue, lung etc...). Use terms from the foundational model of
    anatomy ontology (fma) or the Uber-anatomy ontology (UBERON)
  title: host body site
  keywords:
  - body
  - host
  - site
  string_serialization: '{termLabel} [{termID}]'
  slot_uri: MIXS:0000867
host_body_temp:
  annotations:
    Preferred_unit: degree Celsius
  description: Core body temperature of the host when sample was collected
  title: host body temperature
  keywords:
  - body
  - host
  - host.
  - temperature
  slot_uri: MIXS:0000274
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
host_cellular_loc:
  description: 'The localization of the symbiotic host organism within the host from
    which it was sampled: e.g. intracellular if the symbiotic host organism is localized
    within the cells or extracellular if the symbiotic host organism is localized
    outside of cells'
  title: host cellular location
  examples:
  - value: extracellular
  keywords:
  - host
  - host.
  - location
  slot_uri: MIXS:0001313
  range: HostCellularLocEnum
  recommended: true
host_color:
  description: The color of host
  title: host color
  keywords:
  - host
  - host.
  slot_uri: MIXS:0000260
  range: string
host_common_name:
  annotations:
    Preferred_unit: ''
  description: Common name of the host
  title: host common name
  keywords:
  - host
  - host.
  slot_uri: MIXS:0000248
  range: string
host_dependence:
  description: Type of host dependence for the symbiotic host organism to its host
  title: host dependence
  examples:
  - value: obligate
  keywords:
  - host
  - host.
  slot_uri: MIXS:0001315
  range: HostDependenceEnum
  required: true
host_diet:
  description: Type of diet depending on the host, for animals omnivore, herbivore
    etc., for humans high-fat, meditteranean etc.; can include multiple diet types
  title: host diet
  keywords:
  - diet
  - host
  - host.
  slot_uri: MIXS:0000869
  multivalued: true
  range: string
host_disease_stat:
  annotations:
    Expected_value: disease name or Disease Ontology term
  description: List of diseases with which the host has been diagnosed; can include
    multiple diagnoses. The value of the field depends on host; for humans the terms
    should be chosen from the DO (Human Disease Ontology) at https://www.disease-ontology.org,
    non-human host diseases are free text
  title: host disease status
  in_subset:
  - nucleic acid sequence source
  keywords:
  - disease
  - host
  - host.
  - status
  string_serialization: '{termLabel} [{termID}]|{text}'
  slot_uri: MIXS:0000031
host_dry_mass:
  annotations:
    Preferred_unit: kilogram, gram
  description: Measurement of dry mass
  title: host dry mass
  examples:
  - value: 500 gram
  keywords:
  - dry
  - host
  - host.
  - mass
  slot_uri: MIXS:0000257
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
host_fam_rel:
  annotations:
    Expected_value: relationship type;arbitrary identifier
  description: Relationships to other hosts in the same study; can include multiple
    relationships
  title: host family relationship
  keywords:
  - family
  - host
  - host.
  - relationship
  string_serialization: '{text};{text}'
  slot_uri: MIXS:0000872
  multivalued: true
host_genotype:
  description: Observed genotype
  title: host genotype
  keywords:
  - host
  - host.
  slot_uri: MIXS:0000365
  range: string
host_growth_cond:
  description: Literature reference giving growth conditions of the host
  title: host growth conditions
  examples:
  - value: https://academic.oup.com/icesjms/article/68/2/349/617247
  keywords:
  - condition
  - growth
  - host
  - host.
  slot_uri: MIXS:0000871
  range: string
  pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$|([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{PMID}|{DOI}|{URL}|{text}$
    interpolated: true
    partial_match: true
host_height:
  annotations:
    Preferred_unit: centimeter, millimeter, meter
  description: The height of subject
  title: host height
  keywords:
  - height
  - host
  - host.
  slot_uri: MIXS:0000264
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
host_hiv_stat:
  annotations:
    Expected_value: HIV status;HAART initiation status
  description: HIV status of subject, if yes HAART initiation status should also be
    indicated as [YES or NO]
  title: host HIV status
  examples:
  - value: yes;yes
  keywords:
  - host
  - host.
  - status
  string_serialization: '{boolean};{boolean}'
  slot_uri: MIXS:0000265
host_infra_spec_name:
  description: Taxonomic information about the host below subspecies level
  title: host infra-specific name
  keywords:
  - host
  - host.
  slot_uri: MIXS:0000253
  range: string
host_infra_spec_rank:
  description: Taxonomic rank information about the host below subspecies level, such
    as variety, form, rank etc
  title: host infra-specific rank
  keywords:
  - host
  - host.
  - rank
  slot_uri: MIXS:0000254
  range: string
host_last_meal:
  annotations:
    Expected_value: content;duration
  description: Content of last meal and time since feeding; can include multiple values
  title: host last meal
  keywords:
  - host
  - host.
  string_serialization: '{text};{duration}'
  slot_uri: MIXS:0000870
  multivalued: true
host_length:
  annotations:
    Preferred_unit: centimeter, millimeter, meter
  description: The length of subject
  title: host length
  examples:
  - value: 1 meter
  keywords:
  - host
  - host.
  - length
  slot_uri: MIXS:0000256
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
host_life_stage:
  annotations:
    Expected_value: stage
  description: Description of life stage of host
  title: host life stage
  keywords:
  - host
  - host.
  - life
  string_serialization: '{text}'
  slot_uri: MIXS:0000251
host_number:
  annotations:
    Expected_value: count
  description: Number of symbiotic host individuals pooled at the time of collection
  title: host number individual
  examples:
  - value: '3'
  keywords:
  - host
  - host.
  - number
  string_serialization: '{float} m'
  slot_uri: MIXS:0001305
host_occupation:
  description: Most frequent job performed by subject
  title: host occupation
  comments:
  - Couldn't convert host_occupation with value veterinary to integer
  - almost all host_occupation values in the NCBI biosample_set are strings, not integers
  examples:
  - value: veterinary
  keywords:
  - host
  - host.
  slot_uri: MIXS:0000896
  range: string
host_of_host_coinf:
  annotations:
    Expected_value: species name of coinfecting organism(s)
  description: The taxonomic name of any coinfecting organism observed in a symbiotic
    relationship with the host of the sampled host organism. e.g. where a sample collected
    from a host trematode species (A) which was collected from a host_of_host fish
    (B) that was also infected with a nematode (C), the value here would be (C) the
    nematode {species name} or {common name}. Multiple co-infecting species may be
    added in a comma-separated list. For listing symbiotic organisms associated with
    the host (A) use the term Observed host symbiont
  title: observed coinfecting organisms in host of host
  examples:
  - value: Maritrema novaezealandense
  keywords:
  - host
  - host.
  - observed
  - organism
  string_serialization: '{text}'
  slot_uri: MIXS:0001310
host_of_host_disease:
  annotations:
    Expected_value: disease name or Disease Ontology term
  description: List of diseases with which the host of the symbiotic host organism
    has been diagnosed; can include multiple diagnoses. The value of the field depends
    on host; for humans the terms should be chosen from the DO (Human Disease Ontology)
    at https://www.disease-ontology.org, non-human host diseases are free text
  title: host of the symbiotic host disease status
  examples:
  - value: rabies [DOID:11260]
  keywords:
  - disease
  - host
  - host.
  - status
  - symbiosis
  string_serialization: '{termLabel} [{termID}]|{text}'
  slot_uri: MIXS:0001319
  multivalued: true
host_of_host_env_loc:
  annotations:
    Expected_value: UBERON term(s), multiple values can be separated by pipes
  description: For a symbiotic host organism the local anatomical environment within
    its host may have causal influences. Report the anatomical entity(s) which are
    in the direct environment of the symbiotic host organism being sampled and which
    you believe have significant causal influences on your sample or specimen. For
    example, if the symbiotic host organism being sampled is an intestinal worm, its
    local environmental context will be the term for intestine from UBERON (http://uberon.github.io/)
  title: host of the symbiotic host local environmental context
  examples:
  - value: small intestine[uberon:0002108]
  keywords:
  - context
  - environmental
  - host
  - host.
  - symbiosis
  string_serialization: small intestine [UBERON:0002108]
  slot_uri: MIXS:0001325
  multivalued: true
host_of_host_env_med:
  annotations:
    Expected_value: An ontology term for a material such as a tissue type or excreted
      substance
  description: 'Report the environmental material(s) immediately surrounding the symbiotic
    host organism at the time of sampling. This usually will be a tissue or substance
    type from the host, but may be another material if the symbiont is external to
    the host. We recommend using classes from the UBERON ontology, but subclasses
    of ''environmental material'' (http://purl.obolibrary.org/obo/ENVO_00010483) may
    also be used. EnvO documentation about how to use the field: https://github.com/EnvironmentOntology/envo/wiki/Using-ENVO-with-MIxS
    . Terms from other OBO ontologies are permissible as long as they reference mass/volume
    nouns (e.g. air, water, blood) and not discrete, countable entities (e.g. intestines,
    heart).MIxS . Terms from other OBO ontologies are permissible as long as they
    reference mass/volume nouns (e.g. air, water, blood) and not discrete, countable
    entities (e.g. intestines, heart)'
  title: host of the symbiotic host environemental medium
  examples:
  - value: feces[uberon:0001988]
  keywords:
  - environmental
  - host
  - host.
  - symbiosis
  string_serialization: '{termLabel} [{termID}]'
  slot_uri: MIXS:0001326
host_of_host_fam_rel:
  annotations:
    Expected_value: relationship type;arbitrary identifier
  description: Familial relationship of the host of the symbiotic host organisms to
    other hosts of symbiotic host organism in the same study; can include multiple
    relationships
  title: host of the symbiotic host family relationship
  keywords:
  - family
  - host
  - host.
  - relationship
  - symbiosis
  string_serialization: '{text};{text}'
  slot_uri: MIXS:0001328
  multivalued: true
host_of_host_geno:
  description: Observed genotype of the host of the symbiotic host organism
  title: host of the symbiotic host genotype
  keywords:
  - host
  - host.
  - symbiosis
  slot_uri: MIXS:0001331
  range: string
host_of_host_gravid:
  annotations:
    Expected_value: gravidity status;timestamp
  description: Whether or not the host of the symbiotic host organism is gravid, and
    if yes date due or date post-conception, specifying which is used
  title: host of the symbiotic host gravidity
  keywords:
  - host
  - host.
  - symbiosis
  string_serialization: '{boolean};{timestamp}'
  slot_uri: MIXS:0001333
host_of_host_infname:
  description: Taxonomic name information of the host of the symbiotic host organism
    below subspecies level
  title: host of the symbiotic host infra-specific name
  keywords:
  - host
  - host.
  - symbiosis
  slot_uri: MIXS:0001329
  range: string
host_of_host_infrank:
  description: Taxonomic rank information about the host of the symbiotic host organism
    below subspecies level, such as variety, form, rank etc
  title: host of the symbiotic host infra-specific rank
  keywords:
  - host
  - host.
  - rank
  - symbiosis
  slot_uri: MIXS:0001330
  range: string
host_of_host_name:
  description: Common name of the host of the symbiotic host organism
  title: host of the symbiotic host common name
  examples:
  - value: snail
  keywords:
  - host
  - host.
  - symbiosis
  slot_uri: MIXS:0001324
  range: string
host_of_host_pheno:
  annotations:
    Expected_value: phenotype of the host of the symbiotic organism; PATO
  description: Phenotype of the host of the symbiotic host organism. For phenotypic
    quality ontology (PATO) terms, see http://purl.bioontology.org/ontology/pato
  title: host of the symbiotic host phenotype
  keywords:
  - host
  - host.
  - symbiosis
  string_serialization: '{term}'
  slot_uri: MIXS:0001332
host_of_host_sub_id:
  description: 'A unique identifier by which each host of the symbiotic host organism
    subject can be referred to, de-identified, e.g. #H14'
  title: host of the symbiotic host subject id
  examples:
  - value: H3
  keywords:
  - host
  - host.
  - identifier
  - symbiosis
  slot_uri: MIXS:0001327
  range: string
host_of_host_taxid:
  annotations:
    Expected_value: NCBI taxon identifier of the host of the symbiotic taxon organism
  description: NCBI taxon id of the host of the symbiotic host organism
  title: host of the symbiotic host taxon id
  examples:
  - value: '145637'
  keywords:
  - host
  - host.
  - identifier
  - symbiosis
  - taxon
  string_serialization: '{integer}'
  slot_uri: MIXS:0001306
host_of_host_totmass:
  description: Total mass of the host of the symbiotic host organism at collection,
    the unit depends on the host
  title: host of the symbiotic host total mass
  keywords:
  - host
  - host.
  - mass
  - symbiosis
  - total
  slot_uri: MIXS:0001334
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
host_phenotype:
  annotations:
    Expected_value: PATO or HP
  description: Phenotype of human or other host. Use terms from the phenotypic quality
    ontology (pato) or the Human Phenotype Ontology (HP)
  title: host phenotype
  keywords:
  - host
  - host.
  string_serialization: '{termLabel} [{termID}]'
  slot_uri: MIXS:0000874
host_pred_appr:
  description: Tool or approach used for host prediction
  title: host prediction approach
  examples:
  - value: CRISPR spacer match
  in_subset:
  - sequencing
  keywords:
  - host
  - host.
  - predict
  slot_uri: MIXS:0000088
  range: HostPredApprEnum
host_pred_est_acc:
  description: For each tool or approach used for host prediction, estimated false
    discovery rates should be included, either computed de novo or from the literature
  title: host prediction estimated accuracy
  examples:
  - value: 'CRISPR spacer match: 0 or 1 mismatches, estimated 8% FDR at the host genus
      rank (Edwards et al. 2016 doi:10.1093/femsre/fuv048)'
  in_subset:
  - sequencing
  keywords:
  - host
  - host.
  - predict
  slot_uri: MIXS:0000089
  range: string
host_pulse:
  annotations:
    Preferred_unit: beats per minute
  description: Resting pulse, measured as beats per minute
  title: host pulse
  examples:
  - value: 65 beats per minute
  keywords:
  - host
  - host.
  slot_uri: MIXS:0000333
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
host_sex:
  annotations:
    Expected_value: enumeration
  description: Gender or physical sex of the host
  title: host sex
  comments:
  - example of non-binary from Excel sheets does not match any of the enumerated values
  keywords:
  - host
  - host.
  string_serialization: '[female|hermaphrodite|non-binary|male|transgender|transgender
    (female to male)|transgender (male to female)

    |undeclared]'
  slot_uri: MIXS:0000811
host_shape:
  description: Morphological shape of host
  title: host shape
  examples:
  - value: round
  keywords:
  - host
  - host.
  slot_uri: MIXS:0000261
  range: string
host_spec_range:
  annotations:
    Expected_value: NCBI taxid
  description: The range and diversity of host species that an organism is capable
    of infecting, defined by NCBI taxonomy identifier
  title: host specificity or range
  examples:
  - value: '9606'
  in_subset:
  - nucleic acid sequence source
  keywords:
  - host
  - host.
  - range
  string_serialization: '{integer}'
  slot_uri: MIXS:0000030
  multivalued: true
host_specificity:
  description: 'Level of specificity of symbiont-host interaction: e.g. generalist
    (symbiont able to establish associations with distantly related hosts) or species-specific'
  title: host specificity
  examples:
  - value: species-specific
  keywords:
  - host
  - host.
  slot_uri: MIXS:0001308
  range: HostSpecificityEnum
  recommended: true
host_subject_id:
  description: A unique identifier by which each subject can be referred to, de-identified
  title: host subject id
  keywords:
  - host
  - host.
  - identifier
  slot_uri: MIXS:0000861
  range: string
host_subspecf_genlin:
  annotations:
    Expected_value: Genetic lineage below lowest rank of NCBI taxonomy, which is subspecies,
      e.g. serovar, biotype, ecotype, variety, cultivar
  description: Information about the genetic distinctness of the host organism below
    the subspecies level e.g., serovar, serotype, biotype, ecotype, variety, cultivar,
    or any relevant genetic typing schemes like Group I plasmid. Subspecies should
    not be recorded in this term, but in the NCBI taxonomy. Supply both the lineage
    name and the lineage rank separated by a colon, e.g., biovar:abc123
  title: host subspecific genetic lineage
  examples:
  - value: 'serovar:Newport, variety:glabrum, cultivar: Red Delicious'
  keywords:
  - host
  - host.
  - lineage
  string_serialization: '{rank name}:{text}'
  slot_uri: MIXS:0001318
  multivalued: true
host_substrate:
  description: The growth substrate of the host
  title: host substrate
  examples:
  - value: rock
  keywords:
  - host
  - host.
  slot_uri: MIXS:0000252
  range: string
host_symbiont:
  annotations:
    Expected_value: species name or common name
  description: The taxonomic name of the organism(s) found living in mutualistic,
    commensalistic, or parasitic symbiosis with the specific host. The sampled symbiont
    can have its own symbionts. For example, parasites may have hyperparasites (=parasites
    of the parasite)
  title: observed host symbionts
  keywords:
  - host
  - host.
  - observed
  - symbiosis
  string_serialization: '{text}'
  slot_uri: MIXS:0001298
  multivalued: true
host_taxid:
  annotations:
    Expected_value: NCBI taxon identifier
  description: NCBI taxon id of the host, e.g. 9606
  title: host taxid
  keywords:
  - host
  - host.
  - taxon
  slot_uri: MIXS:0000250
host_tot_mass:
  annotations:
    Preferred_unit: kilogram, gram
  description: Total mass of the host at collection, the unit depends on host
  title: host total mass
  keywords:
  - host
  - host.
  - mass
  - total
  slot_uri: MIXS:0000263
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
host_wet_mass:
  annotations:
    Preferred_unit: kilogram, gram
  description: Measurement of wet mass
  title: host wet mass
  examples:
  - value: 1500 gram
  keywords:
  - host
  - host.
  - mass
  - wet
  slot_uri: MIXS:0000567
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
hrt:
  description: Whether subject had hormone replacement theraphy, and if yes start
    date
  title: HRT
  examples:
  - value: '2013-03-25T12:42:31+01:00'
  slot_uri: MIXS:0000969
  range: datetime
humidity:
  description: Amount of water vapour in the air, at the time of sampling
  title: humidity
  keywords:
  - humidity
  slot_uri: MIXS:0000100
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
humidity_regm:
  annotations:
    Expected_value: humidity value;treatment interval and duration
    Preferred_unit: gram per cubic meter
  description: Information about treatment involving an exposure to varying degree
    of humidity; information about treatment involving use of growth hormones; should
    include amount of humidity administered, treatment regimen including how many
    times the treatment was repeated, how long each treatment lasted, and the start
    and end time of the entire treatment; can include multiple regimens
  title: humidity regimen
  examples:
  - value: 25 gram per cubic meter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M
  keywords:
  - humidity
  - regimen
  string_serialization: '{float} {unit};{Rn/start_time/end_time/duration}'
  slot_uri: MIXS:0000568
  multivalued: true
hygienic_area:
  annotations:
    Expected_value: Expected value
  description: The subdivision of areas within a food production facility according
    to hygienic requirements. This field accepts terms listed under hygienic food
    production area (http://purl.obolibrary.org/obo/ENVO). Please add a term that
    most accurately indicates the hygienic area your sample was taken from according
    to the definitions provided
  title: hygienic food production area
  examples:
  - value: Low Hygiene Area
  keywords:
  - area
  - food
  - production
  string_serialization: '{text}'
  slot_uri: MIXS:0001253
hysterectomy:
  description: Specification of whether hysterectomy was performed
  title: hysterectomy
  examples:
  - value: 'no'
  slot_uri: MIXS:0000287
  range: boolean
ihmc_medication_code:
  description: Can include multiple medication codes
  title: IHMC medication code
  examples:
  - value: '810'
  keywords:
  - code
  slot_uri: MIXS:0000884
  multivalued: true
  range: integer
indoor_space:
  description: A distinguishable space within a structure, the purpose for which discrete
    areas of a building is used
  title: indoor space
  examples:
  - value: foyer
  keywords:
  - indoor
  slot_uri: MIXS:0000763
  range: IndoorSpaceEnum
  required: true
indoor_surf:
  description: Type of indoor surface
  title: indoor surface
  examples:
  - value: wall
  keywords:
  - indoor
  - surface
  slot_uri: MIXS:0000764
  range: IndoorSurfEnum
indust_eff_percent:
  annotations:
    Preferred_unit: percentage
  description: Percentage of industrial effluents received by wastewater treatment
    plant
  title: industrial effluent percent
  keywords:
  - percent
  slot_uri: MIXS:0000662
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
inorg_particles:
  annotations:
    Expected_value: inorganic particle name;measurement value
    Preferred_unit: mole per liter, milligram per liter
  description: Concentration of particles such as sand, grit, metal particles, ceramics,
    etc.; can include multiple particles
  title: inorganic particles
  keywords:
  - inorganic
  - particle
  string_serialization: '{text};{float} {unit}'
  slot_uri: MIXS:0000664
  multivalued: true
inside_lux:
  annotations:
    Preferred_unit: kilowatt per square metre
  description: The recorded value at sampling time (power density)
  title: inside lux light
  keywords:
  - inside
  - light
  slot_uri: MIXS:0000168
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
int_wall_cond:
  description: The physical condition of the wall at the time of sampling; photos
    or video preferred; use drawings to indicate location of damaged areas
  title: interior wall condition
  examples:
  - value: damaged
  keywords:
  - condition
  - interior
  - wall
  slot_uri: MIXS:0000813
  range: DamagedEnum
intended_consumer:
  annotations:
    Expected_value: FOODON_03510136 or NCBI taxid
  description: Food consumer type, human or animal, for which the food product is
    produced and marketed. This field accepts terms listed under food consumer group
    (http://purl.obolibrary.org/obo/FOODON_03510136) or NCBI taxid
  title: intended consumer
  examples:
  - value: 9606 o rsenior as food consumer [FOODON:03510254]
  keywords:
  - consumer
  string_serialization: '{integer}|{termLabel} [{termID}]'
  slot_uri: MIXS:0001144
  multivalued: true
isol_growth_condt:
  description: Publication reference in the form of pubmed ID (pmid), digital object
    identifier (doi) or url for isolation and growth condition specifications of the
    organism/material
  title: isolation and growth condition
  examples:
  - value: doi:10.1016/j.syapm.2018.01.009
  in_subset:
  - nucleic acid sequence source
  keywords:
  - condition
  - growth
  - isolation
  slot_uri: MIXS:0000003
  range: string
  pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$$
  structured_pattern:
    syntax: ^{PMID}|{DOI}|{URL}$
    interpolated: true
    partial_match: true
iw_bt_date_well:
  description: Injection water breakthrough date per well following a secondary and/or
    tertiary recovery
  title: injection water breakthrough date of specific well
  examples:
  - value: '2013-03-25T12:42:31+01:00'
  keywords:
  - date
  - water
  slot_uri: MIXS:0001010
  range: datetime
iwf:
  annotations:
    Preferred_unit: percent
  description: Proportion of the produced fluids derived from injected water at the
    time of sampling. (e.g. 87%)
  title: injection water fraction
  comments:
  - pattern was "[0-9]*\\.?[0-9]+ ?%"
  - percent or float?
  examples:
  - value: '0.79'
  keywords:
  - fraction
  - water
  slot_uri: MIXS:0000455
  range: float
  required: true
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
kidney_disord:
  description: History of kidney disorders; can include multiple disorders. The terms
    should be chosen from the DO (Human Disease Ontology) at http://www.disease-ontology.org,
    kidney disease (https://disease-ontology.org/?id=DOID:557)
  title: urine/kidney disorder
  keywords:
  - disorder
  slot_uri: MIXS:0000277
  multivalued: true
  range: string
last_clean:
  description: The last time the floor was cleaned (swept, mopped, vacuumed)
  title: last time swept/mopped/vacuumed
  examples:
  - value: '2013-03-25T12:42:31+01:00'
  keywords:
  - time
  slot_uri: MIXS:0000814
  range: datetime
lat_lon:
  annotations:
    Expected_value: decimal degrees,  limit to 8 decimal points
  description: The geographical origin of the sample as defined by latitude and longitude.
    The values should be reported in decimal degrees and in WGS84 system
  title: geographic location (latitude and longitude)
  examples:
  - value: 50.586825 6.408977
  in_subset:
  - environment
  keywords:
  - geographic
  - location
  string_serialization: '{float} {float}'
  slot_uri: MIXS:0000009
  required: true
  pattern: ^(-?((?:[0-8]?[0-9](?:\.\d{0,8})?)|90)) -?[0-9]+(?:\.[0-9]{0,8})?$|^-?(1[0-7]{1,2})$
  structured_pattern:
    syntax: ^{lat} {lon}$
    interpolated: true
    partial_match: true
lib_layout:
  description: Specify whether to expect single, paired, or other configuration of
    reads
  title: library layout
  examples:
  - value: paired
  in_subset:
  - sequencing
  keywords:
  - library
  slot_uri: MIXS:0000041
  range: LibLayoutEnum
lib_reads_seqd:
  description: Total number of clones sequenced from the library
  title: library reads sequenced
  examples:
  - value: '20'
  in_subset:
  - sequencing
  keywords:
  - library
  slot_uri: MIXS:0000040
  range: integer
lib_screen:
  annotations:
    Expected_value: screening strategy name
  description: Specific enrichment or screening methods applied before and/or after
    creating libraries
  title: library screening strategy
  examples:
  - value: enriched, screened, normalized
  in_subset:
  - sequencing
  keywords:
  - library
  string_serialization: '{text}'
  slot_uri: MIXS:0000043
lib_size:
  description: Total number of clones in the library prepared for the project
  title: library size
  examples:
  - value: '50'
  in_subset:
  - sequencing
  keywords:
  - library
  - size
  slot_uri: MIXS:0000039
  range: integer
lib_vector:
  annotations:
    Expected_value: vector
  description: Cloning vector type(s) used in construction of libraries
  title: library vector
  examples:
  - value: Bacteriophage P1
  in_subset:
  - sequencing
  keywords:
  - library
  string_serialization: '{text}'
  slot_uri: MIXS:0000042
library_prep_kit:
  annotations:
    Expected_value: name of library preparation kit
  description: Packaged kits (containing adapters, indexes, enzymes, buffers etc.),
    tailored for specific sequencing workflows, which allow the simplified preparation
    of sequencing-ready libraries for small genomes, amplicons, and plasmids
  title: library preparation kit
  keywords:
  - kit
  - library
  - preparation
  string_serialization: '{text}'
  slot_uri: MIXS:0001145
light_intensity:
  annotations:
    Preferred_unit: lux
  description: Measurement of light intensity
  title: light intensity
  examples:
  - value: 0.3 lux
  keywords:
  - intensity
  - light
  slot_uri: MIXS:0000706
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
light_regm:
  annotations:
    Expected_value: exposure type;light intensity;light quality
    Preferred_unit: lux; micrometer, nanometer, angstrom
  description: Information about treatment(s) involving exposure to light, including
    both light intensity and quality
  title: light regimen
  examples:
  - value: incandescant light;10 lux;450 nanometer
  keywords:
  - light
  - regimen
  string_serialization: '{text};{float} {unit};{float} {unit}'
  slot_uri: MIXS:0000569
light_type:
  description: Application of light to achieve some practical or aesthetic effect.
    Lighting includes the use of both artificial light sources such as lamps and light
    fixtures, as well as natural illumination by capturing daylight. Can also include
    absence of light
  title: light type
  examples:
  - value: desk lamp
  keywords:
  - light
  - type
  slot_uri: MIXS:0000769
  multivalued: true
  range: LightTypeEnum
  required: true
link_addit_analys:
  description: Link to additional analysis results performed on the sample
  title: links to additional analysis
  keywords:
  - link
  slot_uri: MIXS:0000340
  range: string
  pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$$
  structured_pattern:
    syntax: ^{PMID}|{DOI}|{URL}$
    interpolated: true
    partial_match: true
link_class_info:
  annotations:
    Expected_value: PMID,DOI or url
  description: Link to digitized soil maps or other soil classification information
  title: link to classification information
  keywords:
  - classification
  - information
  - link
  string_serialization: '{termLabel} [{termID}]'
  slot_uri: MIXS:0000329
link_climate_info:
  description: Link to climate resource
  title: link to climate information
  keywords:
  - information
  - link
  slot_uri: MIXS:0000328
  range: string
  pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$$
  structured_pattern:
    syntax: ^{PMID}|{DOI}|{URL}$
    interpolated: true
    partial_match: true
lithology:
  description: 'Hydrocarbon resource main lithology (Additional information: http://petrowiki.org/Lithology_and_rock_type_determination).
    If "other" is specified, please propose entry in "additional info" field'
  title: lithology
  examples:
  - value: Volcanic
  keywords:
  - lithology
  slot_uri: MIXS:0000990
  range: LithologyEnum
  recommended: true
liver_disord:
  description: History of liver disorders; can include multiple disorders. The terms
    should be chosen from the DO (Human Disease Ontology) at http://www.disease-ontology.org,
    liver disease (https://disease-ontology.org/?id=DOID:409)
  title: liver disorder
  keywords:
  - disorder
  slot_uri: MIXS:0000282
  multivalued: true
  range: string
local_class:
  annotations:
    Expected_value: local classification name
  description: Soil classification based on local soil classification system
  title: soil_taxonomic/local classification
  keywords:
  - classification
  string_serialization: '{text}'
  slot_uri: MIXS:0000330
local_class_meth:
  description: Reference or method used in determining the local soil classification
  title: soil_taxonomic/local classification method
  keywords:
  - classification
  - method
  slot_uri: MIXS:0000331
  range: string
  pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$$
  structured_pattern:
    syntax: ^{PMID}|{DOI}|{URL}$
    interpolated: true
    partial_match: true
lot_number:
  annotations:
    Expected_value: lot number, item
  description: 'A distinctive alpha-numeric identification code assigned by the manufacturer
    or distributor to a specific quantity of manufactured material or product within
    a batch. Synonym: Batch Number.  The submitter should provide lot number of the
    item followed by the item name for which the lot number was provided'
  title: lot number
  examples:
  - value: 1239ABC01A, split Cornish hens
  keywords:
  - number
  string_serialization: '{integer}, {text}'
  slot_uri: MIXS:0001147
  multivalued: true
mag_cov_software:
  description: Tool(s) used to determine the genome coverage if coverage is used as
    a binning parameter in the extraction of genomes from metagenomic datasets
  title: MAG coverage software
  examples:
  - value: bbmap
  in_subset:
  - sequencing
  keywords:
  - software
  slot_uri: MIXS:0000080
  range: MagCovSoftwareEnum
magnesium:
  annotations:
    Preferred_unit: mole per liter, milligram per liter, parts per million, micromole
      per kilogram
  description: Concentration of magnesium in the sample
  title: magnesium
  examples:
  - value: 52.8 micromole per kilogram
  slot_uri: MIXS:0000431
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
maternal_health_stat:
  description: Specification of the maternal health status
  title: amniotic fluid/maternal health status
  keywords:
  - status
  slot_uri: MIXS:0000273
  range: string
max_occup:
  description: The maximum amount of people allowed in the indoor environment
  title: maximum occupancy
  keywords:
  - maximum
  slot_uri: MIXS:0000229
  range: string
  pattern: ^[1-9][0-9]* ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{integer} {text}$
    interpolated: true
    partial_match: true
mean_frict_vel:
  annotations:
    Preferred_unit: meter per second
  description: Measurement of mean friction velocity
  title: mean friction velocity
  examples:
  - value: 0.5 meter per second
  keywords:
  - mean
  - velocity
  slot_uri: MIXS:0000498
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
mean_peak_frict_vel:
  annotations:
    Preferred_unit: meter per second
  description: Measurement of mean peak friction velocity
  title: mean peak friction velocity
  examples:
  - value: 1 meter per second
  keywords:
  - mean
  - peak
  - velocity
  slot_uri: MIXS:0000502
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
mech_struc:
  description: 'mechanical structure: a moving structure'
  title: mechanical structure
  examples:
  - value: elevator
  slot_uri: MIXS:0000815
  range: MechStrucEnum
mechanical_damage:
  annotations:
    Expected_value: damage type;body site
  description: Information about any mechanical damage exerted on the plant; can include
    multiple damages and sites
  title: mechanical damage
  examples:
  - value: pruning;bark
  string_serialization: '{text};{text}'
  slot_uri: MIXS:0001052
  multivalued: true
medic_hist_perform:
  description: Whether full medical history was collected
  title: medical history performed
  examples:
  - value: '1'
  keywords:
  - history
  slot_uri: MIXS:0000897
  range: boolean
menarche:
  description: Date of most recent menstruation
  title: menarche
  examples:
  - value: '2013-03-25T12:42:31+01:00'
  slot_uri: MIXS:0000965
  range: datetime
menopause:
  description: Date of onset of menopause
  title: menopause
  examples:
  - value: '2013-03-25T12:42:31+01:00'
  slot_uri: MIXS:0000968
  range: datetime
methane:
  annotations:
    Preferred_unit: micromole per liter, parts per billion, parts per million
  description: Methane (gas) amount or concentration at the time of sampling
  title: methane
  slot_uri: MIXS:0000101
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
micro_biomass_meth:
  description: Reference or method used in determining microbial biomass
  title: microbial biomass method
  comments:
  - slot name/scn was microbial_biomass_meth
  examples:
  - value: http://dx.doi.org/10.1016/j.soilbio.2005.01.021
  keywords:
  - biomass
  - method
  - microbial
  slot_uri: MIXS:0000339
  range: string
  pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$$
  structured_pattern:
    syntax: ^{PMID}|{DOI}|{URL}$
    interpolated: true
    partial_match: true
microb_cult_med:
  description: A culture medium used to select for, grow, and maintain prokaryotic
    microorganisms. Can be in either liquid (broth) or solidified (e.g. with agar)
    forms. This field accepts terms listed under microbiological culture medium (http://purl.obolibrary.org/obo/MICRO_0000067).
    If the proper descriptor is not listed please use text to describe the culture
    medium
  title: microbiological culture medium
  examples:
  - value: brain heart infusion agar [MICRO:0000566]
  keywords:
  - culture
  - microbiological
  slot_uri: MIXS:0001216
  range: string
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+)|(([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\])$
  structured_pattern:
    syntax: ^{text}|({termLabel} \[{termID}\])$
    interpolated: true
    partial_match: true
microb_start:
  annotations:
    Expected_value: FOODON:03544453
  description: Any type of microorganisms used in food production.  This field accepts
    terms listed under live organisms for food production (http://purl.obolibrary.org/obo/FOODON_0344453)
  title: microbial starter
  examples:
  - value: starter cultures [FOODON:03544454]
  keywords:
  - microbial
  string_serialization: '{term label} [{termID}]|{text}'
  slot_uri: MIXS:0001217
microb_start_count:
  annotations:
    Expected_value: organism name; measurement value; enumeration
    Preferred_unit: colony forming units per milliliter; colony forming units per
      gram of dry weight
  description: 'Total cell count of starter culture per gram, volume or area of sample
    and the method that was used for the enumeration (e.g. qPCR, atp, mpn, etc.) should
    also be provided. (example : total prokaryotes; 3.5e7 cells per ml; qPCR)'
  title: microbial starter organism count
  examples:
  - value: total prokaryotes;3.5e9 colony forming units per milliliter;spread plate
  keywords:
  - count
  - microbial
  - organism
  string_serialization: '{text};{float} {unit};[ATP|MPN|qPCR|spread plate|other]'
  slot_uri: MIXS:0001218
microb_start_inoc:
  annotations:
    Preferred_unit: milligram or gram
  description: The amount of starter culture used to inoculate a new batch
  title: microbial starter inoculation
  examples:
  - value: 100 milligrams
  keywords:
  - microbial
  slot_uri: MIXS:0001219
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
microb_start_prep:
  description: Information about the protocol or method used to prepare the starter
    inoculum
  title: microbial starter preparation
  examples:
  - value: liquid starter culture, propagated 3 cycles in milk prior to inoculation
  keywords:
  - microbial
  - preparation
  slot_uri: MIXS:0001220
  range: string
microb_start_source:
  description: The source from which the microbial starter culture was sourced.  If
    commercially supplied, list supplier
  title: microbial starter source
  examples:
  - value: backslopped, GetCulture
  keywords:
  - microbial
  - source
  slot_uri: MIXS:0001221
  range: string
microb_start_taxID:
  description: Please include Genus species and strain ID, if known of microorganisms
    used in food production. For complex communities, pipes can be used to separate
    two or more microbes
  title: microbial starter NCBI taxonomy ID
  examples:
  - value: Lactobacillus rhamnosus [NCIT:C123495]
  keywords:
  - identifier
  - microbial
  - ncbi
  - taxon
  slot_uri: MIXS:0001222
  range: string
  pattern: ^(([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\])|[1-9][0-9]*$
  structured_pattern:
    syntax: ^({termLabel} \[{termID}\])|{integer}$
    interpolated: true
    partial_match: true
microbial_biomass:
  annotations:
    Preferred_unit: ton, kilogram, gram per kilogram soil
  description: The part of the organic matter in the soil that constitutes living
    microorganisms smaller than 5-10 micrometer. If you keep this, you would need
    to have correction factors used for conversion to the final units
  title: microbial biomass
  keywords:
  - biomass
  - microbial
  slot_uri: MIXS:0000650
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
mid:
  description: Molecular barcodes, called Multiplex Identifiers (MIDs), that are used
    to specifically tag unique samples in a sequencing run. Sequence should be reported
    in uppercase letters
  title: multiplex identifiers
  examples:
  - value: GTGAATAT
  in_subset:
  - sequencing
  keywords:
  - identifier
  slot_uri: MIXS:0000047
  range: string
  pattern: ^[ACGTRKSYMWBHDVN]+$
  structured_pattern:
    syntax: ^{ambiguous_nucleotides}$
    interpolated: true
    partial_match: true
mineral_nutr_regm:
  annotations:
    Expected_value: mineral nutrient name;mineral nutrient amount;treatment interval
      and duration
    Preferred_unit: gram, mole per liter, milligram per liter
  description: Information about treatment involving the use of mineral supplements;
    should include the name of mineral nutrient, amount administered, treatment regimen
    including how many times the treatment was repeated, how long each treatment lasted,
    and the start and end time of the entire treatment; can include multiple mineral
    nutrient regimens
  title: mineral nutrient regimen
  examples:
  - value: potassium;15 gram;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M
  keywords:
  - mineral
  - nutrient
  - regimen
  string_serialization: '{text};{float} {unit};{Rn/start_time/end_time/duration}'
  slot_uri: MIXS:0000570
  multivalued: true
misc_param:
  annotations:
    Expected_value: parameter name;measurement value
  description: Any other measurement performed or parameter collected, that is not
    listed here
  title: miscellaneous parameter
  examples:
  - value: Bicarbonate ion concentration;2075 micromole per kilogram
  keywords:
  - parameter
  string_serialization: '{text};{float} {unit}'
  slot_uri: MIXS:0000752
  multivalued: true
mode_transmission:
  description: The process through which the symbiotic host organism entered the host
    from which it was sampled
  title: mode of transmission
  examples:
  - value: horizontal:castrator
  slot_uri: MIXS:0001312
  range: ModeTransmissionEnum
  recommended: true
n_alkanes:
  annotations:
    Expected_value: n-alkane name;measurement value
  description: Concentration of n-alkanes; can include multiple n-alkanes
  title: n-alkanes
  examples:
  - value: n-hexadecane;100 milligram per liter
  string_serialization: '{text};{float} {unit}'
  slot_uri: MIXS:0000503
  multivalued: true
neg_cont_type:
  annotations:
    Expected_value: enumeration or text
  description: The substance or equipment used as a negative control in an investigation
  title: negative control type
  in_subset:
  - investigation
  keywords:
  - type
  slot_uri: MIXS:0001321
  range: NegContTypeEnum
  recommended: true
nitrate:
  annotations:
    Preferred_unit: micromole per liter, milligram per liter, parts per million
  description: Concentration of nitrate in the sample
  title: nitrate
  examples:
  - value: 65 micromole per liter
  keywords:
  - nitrate
  slot_uri: MIXS:0000425
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
nitrite:
  annotations:
    Preferred_unit: micromole per liter, milligram per liter, parts per million
  description: Concentration of nitrite in the sample
  title: nitrite
  examples:
  - value: 0.5 micromole per liter
  keywords:
  - nitrite
  slot_uri: MIXS:0000426
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
nitro:
  annotations:
    Preferred_unit: micromole per liter
  description: Concentration of nitrogen (total)
  title: nitrogen
  examples:
  - value: 4.2 micromole per liter
  keywords:
  - nitrogen
  slot_uri: MIXS:0000504
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
non_min_nutr_regm:
  annotations:
    Preferred_unit: gram, mole per liter, milligram per liter
  description: Information about treatment involving the exposure of plant to non-mineral
    nutrient such as oxygen, hydrogen or carbon; should include the name of non-mineral
    nutrient, amount administered, treatment regimen including how many times the
    treatment was repeated, how long each treatment lasted, and the start and end
    time of the entire treatment; can include multiple non-mineral nutrient regimens
  title: non-mineral nutrient regimen
  examples:
  - value: https://phylogenomics.me/protocols/16s-pcr-protocol/
  keywords:
  - non-mineral
  - nutrient
  - regimen
  slot_uri: MIXS:0000571
  multivalued: true
  range: string
nose_mouth_teeth_throat_disord:
  description: History of nose/mouth/teeth/throat disorders; can include multiple
    disorders. The terms should be chosen from the DO (Human Disease Ontology) at
    http://www.disease-ontology.org, nose disease (https://disease-ontology.org/?id=DOID:2825),
    mouth disease (https://disease-ontology.org/?id=DOID:403), tooth disease (https://disease-ontology.org/?id=DOID:1091),
    or upper respiratory tract disease (https://disease-ontology.org/?id=DOID:974)
  title: nose/mouth/teeth/throat disorder
  keywords:
  - disorder
  slot_uri: MIXS:0000283
  multivalued: true
  range: string
nose_throat_disord:
  description: History of nose-throat disorders; can include multiple disorders,  The
    terms should be chosen from the DO (Human Disease Ontology) at http://www.disease-ontology.org,
    lung disease (https://disease-ontology.org/?id=DOID:850), upper respiratory tract
    disease (https://disease-ontology.org/?id=DOID:974)
  title: nose throat disorder
  keywords:
  - disorder
  slot_uri: MIXS:0000270
  multivalued: true
  range: string
nucl_acid_amp:
  description: A link to a literature reference, electronic resource or a standard
    operating procedure (SOP), that describes the enzymatic amplification (PCR, TMA,
    NASBA) of specific nucleic acids
  title: nucleic acid amplification
  examples:
  - value: https://phylogenomics.me/protocols/16s-pcr-protocol/
  in_subset:
  - sequencing
  slot_uri: MIXS:0000038
  range: string
  pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$$
  structured_pattern:
    syntax: ^{PMID}|{DOI}|{URL}$
    interpolated: true
    partial_match: true
nucl_acid_ext:
  description: A link to a literature reference, electronic resource or a standard
    operating procedure (SOP), that describes the material separation to recover the
    nucleic acid fraction from a sample
  title: nucleic acid extraction
  examples:
  - value: https://mobio.com/media/wysiwyg/pdfs/protocols/12888.pdf
  in_subset:
  - sequencing
  slot_uri: MIXS:0000037
  range: string
  pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$$
  structured_pattern:
    syntax: ^{PMID}|{DOI}|{URL}$
    interpolated: true
    partial_match: true
nucl_acid_ext_kit:
  annotations:
    Expected_value: The name of an extraction kit
  description: The name of the extraction kit used to recover the nucleic acid fraction
    of an input material is performed
  title: nucleic acid extraction kit
  examples:
  - value: Qiagen PowerSoil Kit
  keywords:
  - kit
  string_serialization: '{text}'
  slot_uri: MIXS:0001223
  multivalued: true
num_replicons:
  annotations:
    Expected_value: 'for eukaryotes and bacteria: chromosomes (haploid count); for
      viruses: segments'
  description: Reports the number of replicons in a nuclear genome of eukaryotes,
    in the genome of a bacterium or archaea or the number of segments in a segmented
    virus. Always applied to the haploid chromosome count of a eukaryote
  title: number of replicons
  examples:
  - value: '2'
  in_subset:
  - nucleic acid sequence source
  keywords:
  - number
  string_serialization: '{integer}'
  slot_uri: MIXS:0000022
  range: integer
num_samp_collect:
  description: The number of samples collected during the current sampling event
  title: number of samples collected
  examples:
  - value: 116 samples
  keywords:
  - number
  - sample
  slot_uri: MIXS:0001224
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
number_contig:
  description: Total number of contigs in the cleaned/submitted assembly that makes
    up a given genome, SAG, MAG, or UViG
  title: number of contigs
  examples:
  - value: '40'
  in_subset:
  - sequencing
  keywords:
  - number
  slot_uri: MIXS:0000060
  range: integer
number_pets:
  description: The number of pets residing in the sampled space
  title: number of pets
  keywords:
  - number
  slot_uri: MIXS:0000231
  range: string
  pattern: ^[1-9][0-9]* ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{integer} {text}$
    interpolated: true
    partial_match: true
number_plants:
  description: The number of plant(s) in the sampling space
  title: number of houseplants
  keywords:
  - number
  slot_uri: MIXS:0000230
  range: string
  pattern: ^[1-9][0-9]* ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{integer} {text}$
    interpolated: true
    partial_match: true
number_resident:
  description: The number of individuals currently occupying in the sampling location
  title: number of residents
  keywords:
  - number
  slot_uri: MIXS:0000232
  range: string
  pattern: ^[1-9][0-9]* ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{integer} {text}$
    interpolated: true
    partial_match: true
occup_density_samp:
  description: Average number of occupants at time of sampling per square footage
  title: occupant density at sampling
  examples:
  - value: '0.1'
  keywords:
  - density
  slot_uri: MIXS:0000217
  range: float
  required: true
occup_document:
  description: The type of documentation of occupancy
  title: occupancy documentation
  examples:
  - value: estimate
  keywords:
  - documentation
  slot_uri: MIXS:0000816
  range: OccupDocumentEnum
occup_samp:
  description: Number of occupants present at time of sample within the given space
  title: occupancy at sampling
  examples:
  - value: '10'
  slot_uri: MIXS:0000772
  range: float
  required: true
  pattern: ^[1-9][0-9]* ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{integer} {text}$
    interpolated: true
    partial_match: true
org_carb:
  description: Concentration of organic carbon
  title: organic carbon
  examples:
  - value: 1.5 microgram per liter
  keywords:
  - carbon
  - organic
  slot_uri: MIXS:0000508
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
org_count_qpcr_info:
  annotations:
    Expected_value: gene name;FWD:forward primer sequence;REV:reverse primer sequence;initial
      denaturation:degrees_minutes;denaturation:degrees_minutes;annealing:degrees_minutes;elongation:degrees_minutes;final
      elongation:degrees_minutes; total cycles
    Preferred_unit: number of cells per gram (or ml or cm^2)
  description: 'If qpcr was used for the cell count, the target gene name, the primer
    sequence and the cycling conditions should also be provided. (Example: 16S rrna;
    FWD:ACGTAGCTATGACGT REV:GTGCTAGTCGAGTAC; initial denaturation:90C_5min; denaturation:90C_2min;
    annealing:52C_30 sec; elongation:72C_30 sec; 90 C for 1 min; final elongation:72C_5min;
    30 cycles)'
  title: organism count qPCR information
  keywords:
  - count
  - information
  - organism
  string_serialization: '{text};FWD:{dna};REV:{dna};initial denaturation:degrees_minutes;denaturation:degrees_minutes;annealing:degrees_minutes;elongation:degrees_minutes;final
    elongation:degrees_minutes; total cycles'
  slot_uri: MIXS:0000099
org_matter:
  annotations:
    Preferred_unit: microgram per liter
  description: Concentration of organic matter
  title: organic matter
  examples:
  - value: 1.75 milligram per cubic meter
  keywords:
  - organic
  slot_uri: MIXS:0000204
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
org_nitro:
  description: Concentration of organic nitrogen
  title: organic nitrogen
  examples:
  - value: 4 micromole per liter
  keywords:
  - nitrogen
  - organic
  slot_uri: MIXS:0000205
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
org_particles:
  annotations:
    Expected_value: particle name;measurement value
    Preferred_unit: gram per liter
  description: Concentration of particles such as faeces, hairs, food, vomit, paper
    fibers, plant material, humus, etc
  title: organic particles
  keywords:
  - organic
  - particle
  string_serialization: '{text};{float} {unit}'
  slot_uri: MIXS:0000665
  multivalued: true
organism_count:
  annotations:
    Expected_value: organism name;measurement value;enumeration
  description: 'Total cell count of any organism (or group of organisms) per gram,
    volume or area of sample, should include name of organism followed by count. The
    method that was used for the enumeration (e.g. qPCR, atp, mpn, etc.) Should also
    be provided. (example: total prokaryotes; 3.5e7 cells per ml; qpcr)'
  title: organism count
  keywords:
  - count
  - organism
  string_serialization: '{text};{float} {unit};[ATP|MPN|qPCR|other]'
  slot_uri: MIXS:0000103
  multivalued: true
otu_class_appr:
  annotations:
    Expected_value: cutoffs and method used
  description: Cutoffs and approach used when clustering  species-level  OTUs. Note
    that results from standard 95% ANI / 85% AF clustering should be provided alongside
    OTUS defined from another set of thresholds, even if the latter are the ones primarily
    used during the analysis
  title: OTU classification approach
  examples:
  - value: 95% ANI;85% AF; greedy incremental clustering
  in_subset:
  - sequencing
  keywords:
  - classification
  - otu
  string_serialization: '{ANI cutoff};{AF cutoff};{clustering method}'
  slot_uri: MIXS:0000085
otu_db:
  annotations:
    Expected_value: database and version
  description: Reference database (i.e. sequences not generated as part of the current
    study) used to cluster new genomes in "species-level" OTUs, if any
  title: OTU database
  examples:
  - value: NCBI Viral RefSeq;83
  in_subset:
  - sequencing
  keywords:
  - database
  - otu
  string_serialization: '{database};{version}'
  slot_uri: MIXS:0000087
otu_seq_comp_appr:
  annotations:
    Expected_value: software name, version and relevant parameters
  description: Tool and thresholds used to compare sequences when computing "species-level"
    OTUs
  title: OTU sequence comparison approach
  examples:
  - value: 'blastn;2.6.0+;e-value cutoff: 0.001'
  in_subset:
  - sequencing
  keywords:
  - otu
  string_serialization: '{software};{version};{parameters}'
  slot_uri: MIXS:0000086
owc_tvdss:
  annotations:
    Preferred_unit: meter
  description: Depth of the original oil water contact (OWC) zone (average) (m TVDSS)
  title: oil water contact depth
  keywords:
  - depth
  - oil
  - water
  slot_uri: MIXS:0000405
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
oxy_stat_samp:
  description: Oxygenation status of sample
  title: oxygenation status of sample
  examples:
  - value: aerobic
  keywords:
  - oxygen
  - sample
  - status
  slot_uri: MIXS:0000753
  range: OxyStatSampEnum
oxygen:
  annotations:
    Preferred_unit: milligram per liter, parts per million
  description: Oxygen (gas) amount or concentration at the time of sampling
  title: oxygen
  examples:
  - value: 600 parts per million
  keywords:
  - oxygen
  slot_uri: MIXS:0000104
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
part_org_carb:
  description: Concentration of particulate organic carbon
  title: particulate organic carbon
  examples:
  - value: 1.92 micromole per liter
  keywords:
  - carbon
  - organic
  - particle
  - particulate
  slot_uri: MIXS:0000515
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
part_org_nitro:
  annotations:
    Preferred_unit: microgram per liter, micromole per liter
  description: Concentration of particulate organic nitrogen
  title: particulate organic nitrogen
  examples:
  - value: 0.3 micromole per liter
  keywords:
  - nitrogen
  - organic
  - particle
  - particulate
  slot_uri: MIXS:0000719
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
part_plant_animal:
  annotations:
    Expected_value: FOODON:03420116
  description: The anatomical part of the organism being involved in food production
    or consumption; e.g., a carrot is the root of the plant (root vegetable). This
    field accepts terms listed under part of plant or animal (http://purl.obolibrary.org/obo/FOODON_03420116)
  title: part of plant or animal
  examples:
  - value: chuck [FOODON:03530021]
  keywords:
  - animal
  - plant
  string_serialization: '{text}|{termLabel} [{termID}]'
  slot_uri: MIXS:0001149
  multivalued: true
particle_class:
  annotations:
    Expected_value: particle name;measurement value
    Preferred_unit: micrometer
  description: Particles are classified, based on their size, into six general categories:clay,
    silt, sand, gravel, cobbles, and boulders; should include amount of particle preceded
    by the name of the particle type; can include multiple values
  title: particle classification
  keywords:
  - classification
  - particle
  string_serialization: '{text};{float} {unit}'
  slot_uri: MIXS:0000206
  multivalued: true
pathogenicity:
  annotations:
    Expected_value: names of organisms that the entity is pathogenic to
  description: To what is the entity pathogenic
  title: known pathogenicity
  examples:
  - value: human, animal, plant, fungi, bacteria
  in_subset:
  - nucleic acid sequence source
  string_serialization: '{text}'
  slot_uri: MIXS:0000027
pcr_cond:
  annotations:
    Expected_value: initial denaturation:degrees_minutes;annealing:degrees_minutes;elongation:degrees_minutes;final
      elongation:degrees_minutes;total cycles
  description: Description of reaction conditions and components of PCR in the form
    of 'initial denaturation:94degC_1.5min; annealing=...'
  title: pcr conditions
  examples:
  - value: initial denaturation:94_3;annealing:50_1;elongation:72_1.5;final elongation:72_10;35
  in_subset:
  - sequencing
  keywords:
  - condition
  - pcr
  string_serialization: initial denaturation:degrees_minutes;annealing:degrees_minutes;elongation:degrees_minutes;final
    elongation:degrees_minutes;total cycles
  slot_uri: MIXS:0000049
pcr_primers:
  annotations:
    Expected_value: 'FWD: forward primer sequence;REV:reverse primer sequence'
  description: PCR primers that were used to amplify the sequence of the targeted
    gene, locus or subfragment. This field should contain all the primers used for
    a single PCR reaction if multiple forward or reverse primers are present in a
    single PCR reaction. The primer sequence should be reported in uppercase letters
  title: pcr primers
  examples:
  - value: FWD:GTGCCAGCMGCCGCGGTAA;REV:GGACTACHVGGGTWTCTAAT
  in_subset:
  - sequencing
  keywords:
  - pcr
  string_serialization: FWD:{dna};REV:{dna}
  slot_uri: MIXS:0000046
permeability:
  annotations:
    Expected_value: measurement value range
    Preferred_unit: mD
  description: 'Measure of the ability of a hydrocarbon resource to allow fluids to
    pass through it. (Additional information: https://en.wikipedia.org/wiki/Permeability_(earth_sciences))'
  title: permeability
  string_serialization: '{integer} - {integer} {unit}'
  slot_uri: MIXS:0000404
perturbation:
  annotations:
    Expected_value: perturbation type name;perturbation interval and duration
  description: Type of perturbation, e.g. chemical administration, physical disturbance,
    etc., coupled with perturbation regimen including how many times the perturbation
    was repeated, how long each perturbation lasted, and the start and end time of
    the entire perturbation period; can include multiple perturbation types
  title: perturbation
  examples:
  - value: antibiotic addition;R2/2018-05-11T14:30Z/2018-05-11T19:30Z/P1H30M
  keywords:
  - perturbation
  string_serialization: '{text};{Rn/start_time/end_time/duration}'
  slot_uri: MIXS:0000754
  multivalued: true
pesticide_regm:
  annotations:
    Preferred_unit: gram, mole per liter, milligram per liter
  description: Information about treatment involving use of insecticides; should include
    the name of pesticide, amount administered, treatment regimen including how many
    times the treatment was repeated, how long each treatment lasted, and the start
    and end time of the entire treatment; can include multiple pesticide regimens
  title: pesticide regimen
  examples:
  - value: pyrethrum;0.6 milligram per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M
  keywords:
  - regimen
  slot_uri: MIXS:0000573
  multivalued: true
  range: string
pet_farm_animal:
  annotations:
    Expected_value: presence status;type of animal or pet
  description: Specification of presence of pets or farm animals in the environment
    of subject, if yes the animals should be specified; can include multiple animals
    present
  title: presence of pets or farm animals
  examples:
  - value: yes; 5 cats
  keywords:
  - animal
  - farm
  - presence
  string_serialization: '{boolean};{text}'
  slot_uri: MIXS:0000267
  multivalued: true
petroleum_hydrocarb:
  annotations:
    Preferred_unit: micromole per liter
  description: Concentration of petroleum hydrocarbon
  title: petroleum hydrocarbon
  examples:
  - value: 0.05 micromole per liter
  keywords:
  - hydrocarbon
  - petroleum
  slot_uri: MIXS:0000516
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
ph:
  description: Ph measurement of the sample, or liquid portion of sample, or aqueous
    phase of the fluid
  title: pH
  examples:
  - value: '7.2'
  keywords:
  - ph
  slot_uri: MIXS:0001001
  range: float
ph_meth:
  description: Reference or method used in determining pH
  title: pH method
  examples:
  - value: https://www.epa.gov/sites/production/files/2015-12/documents/9040c.pdf
  keywords:
  - method
  - ph
  slot_uri: MIXS:0001106
  range: string
  pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$$
  structured_pattern:
    syntax: ^{PMID}|{DOI}|{URL}$
    interpolated: true
    partial_match: true
ph_regm:
  description: Information about treatment involving exposure of plants to varying
    levels of ph of the growth media, treatment regimen including how many times the
    treatment was repeated, how long each treatment lasted, and the start and end
    time of the entire treatment; can include multiple regimen
  title: pH regimen
  examples:
  - value: 7.6;R2/2018-05-11:T14:30/2018-05-11T19:30/P1H30M
  keywords:
  - ph
  - regimen
  slot_uri: MIXS:0001056
  multivalued: true
  range: string
phaeopigments:
  annotations:
    Expected_value: phaeopigment name;measurement value
    Preferred_unit: milligram per cubic meter
  description: Concentration of phaeopigments; can include multiple phaeopigments
  title: phaeopigments
  examples:
  - value: 2.5 milligram per cubic meter
  string_serialization: '{text};{float} {unit}'
  slot_uri: MIXS:0000180
  multivalued: true
phosphate:
  annotations:
    Preferred_unit: micromole per liter
  description: Concentration of phosphate
  title: phosphate
  examples:
  - value: 0.7 micromole per liter
  keywords:
  - phosphate
  slot_uri: MIXS:0000505
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
phosplipid_fatt_acid:
  annotations:
    Expected_value: phospholipid fatty acid name;measurement value
  description: Concentration of phospholipid fatty acids; can include multiple values
  title: phospholipid fatty acid
  examples:
  - value: 2.98 milligram per liter
  string_serialization: '{text};{float} {unit}'
  slot_uri: MIXS:0000181
  multivalued: true
photon_flux:
  annotations:
    Preferred_unit: number of photons per second per unit area
  description: Measurement of photon flux
  title: photon flux
  examples:
  - value: 3.926 micromole photons per second per square meter
  slot_uri: MIXS:0000725
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
photosynt_activ:
  annotations:
    Preferred_unit: mol m-2 s-1
  description: Measurement of photosythetic activity (i.e. leaf gas exchange / chlorophyll
    fluorescence emissions / reflectance / transpiration) Please also include the
    term method term detailing the method of activity measurement
  title: photosynthetic activity
  examples:
  - value: 0.1 mol CO2 m-2 s-1
    description: added a magnitude to the example from the XLSX file, " mol CO2 m-2
      s-1"
  slot_uri: MIXS:0001296
  range: string
  recommended: true
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
photosynt_activ_meth:
  description: Reference or method used in measurement of photosythetic activity
  title: photosynthetic activity method
  keywords:
  - method
  slot_uri: MIXS:0001336
  multivalued: true
  range: string
  recommended: true
  pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$|([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{PMID}|{DOI}|{URL}|{text}$
    interpolated: true
    partial_match: true
plant_growth_med:
  annotations:
    Expected_value: EO or enumeration
  description: Specification of the media for growing the plants or tissue cultured
    samples, e.g. soil, aeroponic, hydroponic, in vitro solid culture medium, in vitro
    liquid culture medium. Recommended value is a specific value from EO:plant growth
    medium (follow this link for terms http://purl.obolibrary.org/obo/EO_0007147)
    or other controlled vocabulary
  title: plant growth medium
  keywords:
  - growth
  - plant
  string_serialization: '{termLabel} [{termID}] or [husk|other artificial liquid medium|other
    artificial solid medium|peat moss|perlite|pumice|sand|soil|vermiculite|water]'
  slot_uri: MIXS:0001057
plant_part_maturity:
  annotations:
    Expected_value: FOODON:03530050
  description: A description of the stage of development of a plant or plant part
    based on maturity or ripeness. This field accepts terms listed under degree of
    plant maturity (http://purl.obolibrary.org/obo/FOODON_03530050)
  title: degree of plant part maturity
  examples:
  - value: ripe or mature [FOODON:03530052]
  keywords:
  - degree
  - plant
  string_serialization: '{term label}{term ID}'
  slot_uri: MIXS:0001120
plant_product:
  annotations:
    Expected_value: product name
  description: Substance produced by the plant, where the sample was obtained from
  title: plant product
  examples:
  - value: xylem sap [PO:0025539]
  keywords:
  - plant
  - product
  string_serialization: '{text}'
  slot_uri: MIXS:0001058
plant_reprod_crop:
  description: Plant reproductive part used in the field during planting to start
    the crop
  title: plant reproductive part
  examples:
  - value: seedling
  keywords:
  - plant
  slot_uri: MIXS:0001150
  multivalued: true
  range: PlantReprodCropEnum
plant_sex:
  description: Sex of the reproductive parts on the whole plant, e.g. pistillate,
    staminate, monoecieous, hermaphrodite
  title: plant sex
  examples:
  - value: Hermaphroditic
  keywords:
  - plant
  slot_uri: MIXS:0001059
  range: PlantSexEnum
plant_struc:
  description: Name of plant structure the sample was obtained from; for Plant Ontology
    (PO) (v releases/2017-12-14) terms, see http://purl.bioontology.org/ontology/PO,
    e.g. petiole epidermis (PO_0000051). If an individual flower is sampled, the sex
    of it can be recorded here
  title: plant structure
  examples:
  - value: epidermis [PO:0005679]
  keywords:
  - plant
  slot_uri: MIXS:0001060
  range: string
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\]$
  structured_pattern:
    syntax: ^{termLabel} \[{termID}\]$
    interpolated: true
    partial_match: true
plant_water_method:
  description: Description of the equipment or method used to distribute water to
    crops. This field accepts termed listed under irrigation process (http://purl.obolibrary.org/obo/AGRO_00000006).
    Multiple terms can be separated by pipes
  title: plant water delivery method
  examples:
  - value: drip irrigation process [AGRO:00000056]
  keywords:
  - delivery
  - method
  - plant
  - water
  slot_uri: MIXS:0001111
  range: string
  recommended: true
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\]$
  structured_pattern:
    syntax: ^{termLabel} \[{termID}\]$
    interpolated: true
    partial_match: true
ploidy:
  description: The ploidy level of the genome (e.g. allopolyploid, haploid, diploid,
    triploid, tetraploid). It has implications for the downstream study of duplicated
    gene and regions of the genomes (and perhaps for difficulties in assembly). For
    terms, please select terms listed under class ploidy (PATO:001374) of Phenotypic
    Quality Ontology (PATO), and for a browser of PATO (v 2018-03-27) please refer
    to http://purl.bioontology.org/ontology/PATO
  title: ploidy
  examples:
  - value: allopolyploidy [PATO:0001379]
  in_subset:
  - nucleic acid sequence source
  slot_uri: MIXS:0000021
  range: string
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\]$
  structured_pattern:
    syntax: ^{termLabel} \[{termID}\]$
    interpolated: true
    partial_match: true
pollutants:
  annotations:
    Expected_value: pollutant name;measurement value
    Preferred_unit: gram, mole per liter, milligram per liter, microgram per cubic
      meter
  description: Pollutant types and, amount or concentrations measured at the time
    of sampling; can report multiple pollutants by entering numeric values preceded
    by name of pollutant
  title: pollutants
  examples:
  - value: lead;0.15 microgram per cubic meter
  string_serialization: '{text};{float} {unit}'
  slot_uri: MIXS:0000107
  multivalued: true
pool_dna_extracts:
  annotations:
    Expected_value: pooling status;number of pooled extracts
    Preferred_unit: gram, milliliter, microliter
  description: Indicate whether multiple DNA extractions were mixed. If the answer
    yes, the number of extracts that were pooled should be given
  title: pooling of DNA extracts (if done)
  examples:
  - value: yes, 5
  keywords:
  - dna
  - pooling
  slot_uri: MIXS:0000325
porosity:
  annotations:
    Expected_value: measurement value or range
    Preferred_unit: percentage
  description: Porosity of deposited sediment is volume of voids divided by the total
    volume of sample
  title: porosity
  keywords:
  - porosity
  string_serialization: '{float} - {float} {unit}'
  slot_uri: MIXS:0000211
pos_cont_type:
  description: The substance, mixture, product, or apparatus used to verify that a
    process which is part of an investigation delivers a true positive
  title: positive control type
  in_subset:
  - investigation
  keywords:
  - type
  string_serialization: '{term} or {text}'
  slot_uri: MIXS:0001322
  recommended: true
potassium:
  annotations:
    Preferred_unit: milligram per liter, parts per million
  description: Concentration of potassium in the sample
  title: potassium
  examples:
  - value: 463 milligram per liter
  slot_uri: MIXS:0000430
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
pour_point:
  annotations:
    Preferred_unit: degree Celsius
  description: 'Temperature at which a liquid becomes semi solid and loses its flow
    characteristics. In crude oil a high  pour point  is generally associated with
    a high paraffin content, typically found in crude deriving from a larger proportion
    of plant material. (soure: https://en.wikipedia.org/wiki/pour_point)'
  title: pour point
  slot_uri: MIXS:0000127
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
pre_treatment:
  annotations:
    Expected_value: pre-treatment type
  description: The process of pre-treatment removes materials that can be easily collected
    from the raw wastewater
  title: pre-treatment
  string_serialization: '{text}'
  slot_uri: MIXS:0000348
pred_genome_struc:
  description: Expected structure of the viral genome
  title: predicted genome structure
  examples:
  - value: non-segmented
  in_subset:
  - sequencing
  keywords:
  - predict
  slot_uri: MIXS:0000083
  range: PredGenomeStrucEnum
pred_genome_type:
  annotations:
    Expected_value: enumeration
  description: Type of genome predicted for the UViG
  title: predicted genome type
  examples:
  - value: dsDNA
  in_subset:
  - sequencing
  keywords:
  - predict
  - type
  string_serialization: '[DNA|dsDNA|ssDNA|RNA|dsRNA|ssRNA|ssRNA (+)|ssRNA (-)|mixed|uncharacterized]'
  slot_uri: MIXS:0000082
pregnancy:
  description: Date due of pregnancy
  title: pregnancy
  examples:
  - value: '2013-03-25T12:42:31+01:00'
  slot_uri: MIXS:0000966
  range: datetime
pres_animal_insect:
  annotations:
    Expected_value: enumeration;count
  description: The type and number of animals or insects present in the sampling space
  title: presence of pets, animals, or insects
  examples:
  - value: cat;5
  keywords:
  - animal
  - presence
  string_serialization: '[cat|dog|rodent|snake|other];{integer}'
  slot_uri: MIXS:0000819
pressure:
  annotations:
    Preferred_unit: atmosphere
  description: Pressure to which the sample is subject to, in atmospheres
  title: pressure
  examples:
  - value: 50 atmosphere
  keywords:
  - pressure
  slot_uri: MIXS:0000412
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
prev_land_use_meth:
  description: Reference or method used in determining previous land use and dates
  title: history/previous land use method
  keywords:
  - history
  - land
  - method
  - use
  slot_uri: MIXS:0000316
  range: string
  pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$$
  structured_pattern:
    syntax: ^{PMID}|{DOI}|{URL}$
    interpolated: true
    partial_match: true
previous_land_use:
  annotations:
    Expected_value: land use name;date
  description: Previous land use and dates
  title: history/previous land use
  examples:
  - value: fallow; 2018-05-11:T14:30Z
  keywords:
  - history
  - land
  - use
  string_serialization: '{text};{timestamp}'
  slot_uri: MIXS:0000315
primary_prod:
  annotations:
    Preferred_unit: milligram per cubic meter per day, gram per square meter per day
  description: Measurement of primary production, generally measured as isotope uptake
  title: primary production
  examples:
  - value: 100 milligram per cubic meter per day
  keywords:
  - primary
  - production
  slot_uri: MIXS:0000728
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
primary_treatment:
  annotations:
    Expected_value: primary treatment type
  description: The process to produce both a generally homogeneous liquid capable
    of being treated biologically and a sludge that can be separately treated or processed
  title: primary treatment
  keywords:
  - primary
  - treatment
  string_serialization: '{text}'
  slot_uri: MIXS:0000349
prod_label_claims:
  description: Labeling claims containing descriptors such as wild caught, free-range,
    organic, free-range, industrial, hormone-free, antibiotic free, cage free. Can
    include more than one term, separated by ";"
  title: production labeling claims
  examples:
  - value: free range
  keywords:
  - production
  slot_uri: MIXS:prod_label_claims
  multivalued: true
  range: string
prod_rate:
  annotations:
    Preferred_unit: cubic meter per day
  description: Oil and/or gas production rates per well (e.g. 524 m3 / day)
  title: production rate
  keywords:
  - production
  - rate
  slot_uri: MIXS:0000452
  range: string
  recommended: true
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
prod_start_date:
  description: Date of field's first production
  title: production start date
  examples:
  - value: '2013-03-25T12:42:31+01:00'
  keywords:
  - date
  - production
  - start
  slot_uri: MIXS:0001008
  range: datetime
  recommended: true
profile_position:
  description: Cross-sectional position in the hillslope where sample was collected.sample
    area position in relation to surrounding areas
  title: profile position
  examples:
  - value: summit
  slot_uri: MIXS:0001084
  range: ProfilePositionEnum
project_name:
  description: Name of the project within which the sequencing was organized
  title: project name
  examples:
  - value: Forest soil metagenome
  in_subset:
  - investigation
  keywords:
  - project
  slot_uri: MIXS:0000092
  range: string
  required: true
propagation:
  annotations:
    Expected_value: 'for virus: lytic, lysogenic, temperate, obligately lytic; for
      plasmid: incompatibility group; for eukaryote: asexual, sexual; other more specific
      values (e.g., incompatibility group) are allowed'
  description: 'The type of reproduction from the parent stock. Values for this field
    is specific to different taxa. For phage or virus: lytic/lysogenic/temperate/obligately
    lytic. For plasmids: incompatibility group. For eukaryotes: sexual/asexual'
  title: propagation
  examples:
  - value: lytic
  in_subset:
  - nucleic acid sequence source
  string_serialization: '{text}'
  slot_uri: MIXS:0000033
pulmonary_disord:
  description: History of pulmonary disorders; can include multiple disorders. The
    terms should be chosen from the DO (Human Disease Ontology) at http://www.disease-ontology.org,
    lung disease (https://disease-ontology.org/?id=DOID:850)
  title: lung/pulmonary disorder
  keywords:
  - disorder
  slot_uri: MIXS:0000269
  multivalued: true
  range: string
quad_pos:
  description: The quadrant position of the sampling room within the building
  title: quadrant position
  examples:
  - value: West side
  slot_uri: MIXS:0000820
  range: QuadPosEnum
radiation_regm:
  annotations:
    Expected_value: radiation type name;radiation amount;treatment interval and duration
    Preferred_unit: rad, gray
  description: Information about treatment involving exposure of plant or a plant
    part to a particular radiation regimen; should include the radiation type, amount
    or intensity administered, treatment regimen including how many times the treatment
    was repeated, how long each treatment lasted, and the start and end time of the
    entire treatment; can include multiple radiation regimens
  title: radiation regimen
  examples:
  - value: gamma radiation;60 gray;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M
  keywords:
  - regimen
  string_serialization: '{text};{float} {unit};{Rn/start_time/end_time/duration}'
  slot_uri: MIXS:0000575
  multivalued: true
rainfall_regm:
  annotations:
    Expected_value: measurement value;treatment interval and duration
    Preferred_unit: millimeter
  description: Information about treatment involving an exposure to a given amount
    of rainfall, treatment regimen including how many times the treatment was repeated,
    how long each treatment lasted, and the start and end time of the entire treatment;
    can include multiple regimens
  title: rainfall regimen
  examples:
  - value: 15 millimeter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M
  keywords:
  - rain
  - regimen
  string_serialization: '{float} {unit};{Rn/start_time/end_time/duration}'
  slot_uri: MIXS:0000576
  multivalued: true
reactor_type:
  annotations:
    Expected_value: reactor type name
  description: Anaerobic digesters can be designed and engineered to operate using
    a number of different process configurations, as batch or continuous, mesophilic,
    high solid or low solid, and single stage or multistage
  title: reactor type
  keywords:
  - type
  string_serialization: '{text}'
  slot_uri: MIXS:0000350
reassembly_bin:
  description: Has an assembly been performed on a genome bin extracted from a metagenomic
    assembly?
  title: reassembly post binning
  examples:
  - value: 'no'
  in_subset:
  - sequencing
  keywords:
  - post
  slot_uri: MIXS:0000079
  range: boolean
redox_potential:
  annotations:
    Preferred_unit: millivolt
  description: Redox potential, measured relative to a hydrogen cell, indicating oxidation
    or reduction potential
  title: redox potential
  examples:
  - value: 300 millivolt
  slot_uri: MIXS:0000182
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
ref_biomaterial:
  description: Primary publication if isolated before genome publication; otherwise,
    primary genome report
  title: reference for biomaterial
  examples:
  - value: doi:10.1016/j.syapm.2018.01.009
  in_subset:
  - nucleic acid sequence source
  slot_uri: MIXS:0000025
  range: string
  pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$$
  structured_pattern:
    syntax: ^{PMID}|{DOI}|{URL}$
    interpolated: true
    partial_match: true
ref_db:
  annotations:
    Expected_value: names, versions, and references of databases
  description: List of database(s) used for ORF annotation, along with version number
    and reference to website or publication
  title: reference database(s)
  examples:
  - value: pVOGs;5;http://dmk-brain.ecn.uiowa.edu/pVOGs/ Grazziotin et al. 2017 doi:10.1093/nar/gkw975
  in_subset:
  - sequencing
  keywords:
  - database
  string_serialization: '{database};{version};{reference}'
  slot_uri: MIXS:0000062
rel_air_humidity:
  annotations:
    Preferred_unit: percentage
  description: Partial vapor and air pressure, density of the vapor and air, or by
    the actual mass of the vapor and air
  title: relative air humidity
  comments:
  - percent or float?
  examples:
  - value: '0.8'
  keywords:
  - air
  - humidity
  - relative
  slot_uri: MIXS:0000121
  range: float
  required: true
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
rel_humidity_out:
  annotations:
    Preferred_unit: gram of air, kilogram of air
  description: The recorded outside relative humidity value at the time of sampling
  title: outside relative humidity
  examples:
  - value: 12 per kilogram of air
  keywords:
  - humidity
  - relative
  slot_uri: MIXS:0000188
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
rel_location:
  description: Location of sampled soil to other parts of the farm e.g. under crop
    plant, near irrigation ditch, from the dirt road
  title: relative location of sample
  examples:
  - value: furrow
  keywords:
  - location
  - relative
  - sample
  slot_uri: MIXS:0001161
  range: string
rel_samp_loc:
  description: The sampling location within the train car
  title: relative sampling location
  examples:
  - value: center of car
  keywords:
  - location
  - relative
  slot_uri: MIXS:0000821
  range: RelSampLocEnum
rel_to_oxygen:
  description: Is this organism an aerobe, anaerobe? Please note that aerobic and
    anaerobic are valid descriptors for microbial environments
  title: relationship to oxygen
  examples:
  - value: aerobe
  in_subset:
  - nucleic acid sequence source
  keywords:
  - oxygen
  - relationship
  slot_uri: MIXS:0000015
  range: RelToOxygenEnum
repository_name:
  annotations:
    Expected_value: Institution
  description: The name of the institution where the sample or DNA extract is held
    or "sample not available" if the sample was used in its entirety for analysis
    or otherwise not retained
  title: repository name
  examples:
  - value: FDA CFSAN Microbiology Laboratories
  string_serialization: '{text}'
  slot_uri: MIXS:0001152
  multivalued: true
reservoir:
  description: Name of the reservoir (e.g. Carapebus)
  title: reservoir name
  slot_uri: MIXS:0000303
  range: string
  recommended: true
resins_pc:
  annotations:
    Preferred_unit: percent
  description: 'Saturate, Aromatic, Resin and Asphaltene  (SARA) is an analysis method
    that divides  crude oil  components according to their polarizability and polarity.
    There are three main methods to obtain SARA results. The most popular one is known
    as the Iatroscan TLC-FID and is referred to as IP-143 (source: https://en.wikipedia.org/wiki/Saturate,_aromatic,_resin_and_asphaltene)'
  title: resins wt%
  slot_uri: MIXS:0000134
  range: string
  recommended: true
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+);[-+]?[0-9]*\.?[0-9]+ ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{name};{float} {unit}$
    interpolated: true
    partial_match: true
room_air_exch_rate:
  annotations:
    Preferred_unit: liter per hour
  description: The rate at which outside air replaces indoor air in a given space
  title: room air exchange rate
  keywords:
  - air
  - rate
  - room
  slot_uri: MIXS:0000169
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
room_architec_elem:
  description: The unique details and component parts that, together, form the architecture
    of a distinguisahable space within a built structure
  title: room architectural elements
  keywords:
  - room
  slot_uri: MIXS:0000233
  range: string
room_condt:
  description: The condition of the room at the time of sampling
  title: room condition
  examples:
  - value: new
  keywords:
  - condition
  - room
  slot_uri: MIXS:0000822
  range: RoomCondtEnum
room_connected:
  description: List of rooms connected to the sampling room by a doorway
  title: rooms connected by a doorway
  examples:
  - value: office
  keywords:
  - doorway
  - room
  slot_uri: MIXS:0000826
  range: RoomConnectedEnum
room_count:
  description: The total count of rooms in the built structure including all room
    types
  title: room count
  keywords:
  - count
  - room
  slot_uri: MIXS:0000234
  range: integer
room_dim:
  annotations:
    Expected_value: measurement value
    Preferred_unit: meter
  description: The length, width and height of sampling room
  title: room dimensions
  examples:
  - value: 4 meter x 4 meter x 4 meter
  keywords:
  - dimensions
  - room
  string_serialization: '{integer} {unit} x {integer} {unit} x {integer} {unit}'
  slot_uri: MIXS:0000192
room_door_dist:
  annotations:
    Preferred_unit: meter
  description: Distance between doors (meters) in the hallway between the sampling
    room and adjacent rooms
  title: room door distance
  keywords:
  - distance
  - door
  - room
  slot_uri: MIXS:0000193
  range: string
  pattern: ^[1-9][0-9]* ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{integer} {text}$
    interpolated: true
    partial_match: true
room_door_share:
  description: List of room(s) (room number, room name) sharing a door with the sampling
    room
  title: rooms that share a door with sampling room
  keywords:
  - door
  - room
  slot_uri: MIXS:0000242
  range: string
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+);[1-9][0-9]*$
  structured_pattern:
    syntax: ^{room_name};{room_number}$
    interpolated: true
    partial_match: true
room_hallway:
  description: List of room(s) (room number, room name) located in the same hallway
    as sampling room
  title: rooms that are on the same hallway
  keywords:
  - hallway
  - room
  slot_uri: MIXS:0000238
  range: string
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+);[1-9][0-9]*$
  structured_pattern:
    syntax: ^{room_name};{room_number}$
    interpolated: true
    partial_match: true
room_loc:
  description: The position of the room within the building
  title: room location in building
  examples:
  - value: interior room
  keywords:
  - location
  - room
  slot_uri: MIXS:0000823
  range: RoomLocEnum
room_moist_dam_hist:
  description: The history of moisture damage or mold in the past 12 months. Number
    of events of moisture damage or mold observed
  title: room moisture damage or mold history
  keywords:
  - history
  - moisture
  - room
  slot_uri: MIXS:0000235
  range: integer
room_net_area:
  annotations:
    Preferred_unit: square feet, square meter
  description: The net floor area of sampling room. Net area excludes wall thicknesses
  title: room net area
  keywords:
  - area
  - room
  slot_uri: MIXS:0000194
  range: string
  pattern: ^[1-9][0-9]* ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{integer} {text}$
    interpolated: true
    partial_match: true
room_occup:
  description: Count of room occupancy at time of sampling
  title: room occupancy
  keywords:
  - room
  slot_uri: MIXS:0000236
  range: string
  pattern: ^[1-9][0-9]* ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{integer} {text}$
    interpolated: true
    partial_match: true
room_samp_pos:
  description: The horizontal sampling position in the room relative to architectural
    elements
  title: room sampling position
  examples:
  - value: south corner
  keywords:
  - room
  slot_uri: MIXS:0000824
  range: RoomSampPosEnum
room_type:
  annotations:
    Expected_value: enumeration
  description: The main purpose or activity of the sampling room. A room is any distinguishable
    space within a structure
  title: room type
  examples:
  - value: bathroom
  keywords:
  - room
  - type
  string_serialization: '[attic|bathroom|closet|conference room|elevator|examining
    room|hallway|kitchen|mail room|private office|open office|stairwell|,restroom|lobby|vestibule|mechanical
    or electrical room|data center|laboratory_wet|laboratory_dry|gymnasium|natatorium|auditorium|lockers|cafe|warehouse]'
  slot_uri: MIXS:0000825
room_vol:
  annotations:
    Preferred_unit: cubic feet, cubic meter
  description: Volume of sampling room
  title: room volume
  keywords:
  - room
  - volume
  slot_uri: MIXS:0000195
  range: string
  pattern: ^[1-9][0-9]* ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{integer} {text}$
    interpolated: true
    partial_match: true
room_wall_share:
  description: List of room(s) (room number, room name) sharing a wall with the sampling
    room
  title: rooms that share a wall with sampling room
  keywords:
  - room
  - wall
  slot_uri: MIXS:0000243
  range: string
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+);[1-9][0-9]*$
  structured_pattern:
    syntax: ^{room_name};{room_number}$
    interpolated: true
    partial_match: true
room_window_count:
  description: Number of windows in the room
  title: room window count
  keywords:
  - count
  - room
  - window
  slot_uri: MIXS:0000237
  range: integer
root_cond:
  description: Relevant rooting conditions such as field plot size, sowing density,
    container dimensions, number of plants per container
  title: rooting conditions
  examples:
  - value: http://himedialabs.com/TD/PT158.pdf
  keywords:
  - condition
  slot_uri: MIXS:0001061
  range: string
  pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$|([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{PMID}|{DOI}|{URL}|{text}$
    interpolated: true
    partial_match: true
root_med_carbon:
  annotations:
    Expected_value: carbon source name;measurement value
    Preferred_unit: milligram per liter
  description: Source of organic carbon in the culture rooting medium; e.g. sucrose
  title: rooting medium carbon
  examples:
  - value: sucrose
  keywords:
  - carbon
  string_serialization: '{text};{float} {unit}'
  slot_uri: MIXS:0000577
root_med_macronutr:
  annotations:
    Expected_value: macronutrient name;measurement value
    Preferred_unit: milligram per liter
  description: Measurement of the culture rooting medium macronutrients (N,P, K, Ca,
    Mg, S); e.g. KH2PO4 (170 mg/L)
  title: rooting medium macronutrients
  examples:
  - value: KH2PO4;170  milligram per liter
  keywords:
  - macronutrients
  string_serialization: '{text};{float} {unit}'
  slot_uri: MIXS:0000578
root_med_micronutr:
  annotations:
    Expected_value: micronutrient name;measurement value
    Preferred_unit: milligram per liter
  description: Measurement of the culture rooting medium micronutrients (Fe, Mn, Zn,
    B, Cu, Mo); e.g. H3BO3 (6.2 mg/L)
  title: rooting medium micronutrients
  examples:
  - value: H3BO3;6.2  milligram per liter
  keywords:
  - micronutrients
  string_serialization: '{text};{float} {unit}'
  slot_uri: MIXS:0000579
root_med_ph:
  description: pH measurement of the culture rooting medium; e.g. 5.5
  title: rooting medium pH
  examples:
  - value: '7.5'
  keywords:
  - ph
  slot_uri: MIXS:0001062
  range: float
root_med_regl:
  annotations:
    Expected_value: regulator name;measurement value
    Preferred_unit: milligram per liter
  description: Growth regulators in the culture rooting medium such as cytokinins,
    auxins, gybberellins, abscisic acid; e.g. 0.5  mg/L NAA
  title: rooting medium regulators
  examples:
  - value: abscisic acid;0.75 milligram per liter
  string_serialization: '{text};{float} {unit}'
  slot_uri: MIXS:0000581
root_med_solid:
  description: Specification of the solidifying agent in the culture rooting medium;
    e.g. agar
  title: rooting medium solidifier
  examples:
  - value: agar
  slot_uri: MIXS:0001063
  range: string
root_med_suppl:
  annotations:
    Expected_value: supplement name;measurement value
    Preferred_unit: milligram per liter
  description: Organic supplements of the culture rooting medium, such as vitamins,
    amino acids, organic acids, antibiotics activated charcoal; e.g. nicotinic acid
    (0.5  mg/L)
  title: rooting medium organic supplements
  examples:
  - value: nicotinic acid;0.5 milligram per liter
  keywords:
  - organic
  string_serialization: '{text};{float} {unit}'
  slot_uri: MIXS:0000580
route_transmission:
  description: Description of path taken by the symbiotic host organism being sampled
    in order to establish a symbiotic relationship with the host (with which it was
    observed at the time of sampling) via a mode of transmission (specified in mode_transmission)
  title: route of transmission
  keywords:
  - route
  slot_uri: MIXS:0001316
  range: RouteTransmissionEnum
salinity:
  annotations:
    Preferred_unit: practical salinity unit, percentage
  description: The total concentration of all dissolved salts in a liquid or solid
    sample. While salinity can be measured by a complete chemical analysis, this method
    is difficult and time consuming. More often, it is instead derived from the conductivity
    measurement. This is known as practical salinity. These derivations compare the
    specific conductance of the sample to a salinity standard such as seawater
  title: salinity
  examples:
  - value: 25 practical salinity unit
  keywords:
  - salinity
  slot_uri: MIXS:0000183
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
salt_regm:
  annotations:
    Preferred_unit: gram, microgram, mole per liter, gram per liter
  description: Information about treatment involving use of salts as supplement to
    liquid and soil growth media; should include the name of salt, amount administered,
    treatment regimen including how many times the treatment was repeated, how long
    each treatment lasted, and the start and end time of the entire treatment; can
    include multiple salt regimens
  title: salt regimen
  examples:
  - value: NaCl;5 gram per liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M
  keywords:
  - regimen
  - salt
  slot_uri: MIXS:0000582
  multivalued: true
  range: string
samp_capt_status:
  description: Reason for the sample
  title: sample capture status
  examples:
  - value: farm sample
  keywords:
  - sample
  - status
  slot_uri: MIXS:0000860
  range: SampCaptStatusEnum
samp_collect_device:
  annotations:
    Expected_value: device name
  description: The device used to collect an environmental sample. This field accepts
    terms listed under environmental sampling device (http://purl.obolibrary.org/obo/ENVO).
    This field also accepts terms listed under specimen collection device (http://purl.obolibrary.org/obo/GENEPIO_0002094)
  title: sample collection device
  in_subset:
  - nucleic acid sequence source
  keywords:
  - device
  - sample
  string_serialization: '{termLabel} [{termID}]|{text}'
  slot_uri: MIXS:0000002
samp_collect_method:
  description: The method employed for collecting the sample
  title: sample collection method
  in_subset:
  - nucleic acid sequence source
  keywords:
  - method
  - sample
  slot_uri: MIXS:0001225
  range: string
  pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$|([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{PMID}|{DOI}|{URL}|{text}$
    interpolated: true
    partial_match: true
samp_collect_point:
  description: Sampling point on the asset were sample was collected (e.g. Wellhead,
    storage tank, separator, etc). If "other" is specified, please propose entry in
    "additional info" field
  title: sample collection point
  examples:
  - value: well
  keywords:
  - sample
  slot_uri: MIXS:0001015
  range: SampCollectPointEnum
  required: true
samp_dis_stage:
  description: Stage of the disease at the time of sample collection, e.g. inoculation,
    penetration, infection, growth and reproduction, dissemination of pathogen
  title: sample disease stage
  examples:
  - value: infection
  keywords:
  - disease
  - sample
  slot_uri: MIXS:0000249
  range: SampDisStageEnum
samp_floor:
  annotations:
    Expected_value: enumeration
  description: The floor of the building, where the sampling room is located
  title: sampling floor
  examples:
  - value: 4th floor
  keywords:
  - floor
  string_serialization: '[1st floor|2nd floor|{integer} floor|basement|lobby]'
  slot_uri: MIXS:0000828
samp_loc_condition:
  description: The condition of the sample location at the time of sampling
  title: sample location condition
  examples:
  - value: new
  keywords:
  - condition
  - location
  - sample
  slot_uri: MIXS:0001257
  range: SampLocConditionEnum
samp_loc_corr_rate:
  annotations:
    Preferred_unit: millimeter per year
  description: Metal corrosion rate is the speed of metal deterioration due to environmental
    conditions. As environmental conditions change corrosion rates change accordingly.
    Therefore, long term corrosion rates are generally more informative than short
    term rates and for that reason they are preferred during reporting. In the case
    of suspected MIC, corrosion rate measurements at the time of sampling might provide
    insights into the involvement of certain microbial community members in MIC as
    well as potential microbial interplays
  title: corrosion rate at sample location
  keywords:
  - location
  - rate
  - sample
  slot_uri: MIXS:0000136
  range: string
  recommended: true
  pattern: ^[-+]?[0-9]*\.?[0-9]+ *- *[-+]?[0-9]*\.?[0-9]+ ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{float} *- *{float} {unit}$
    interpolated: true
    partial_match: true
samp_mat_process:
  description: A brief description of any processing applied to the sample during
    or after retrieving the sample from environment, or a link to the relevant protocol(s)
    performed
  title: sample material processing
  examples:
  - value: filtering of seawater, storing samples in ethanol
  in_subset:
  - nucleic acid sequence source
  keywords:
  - material
  - process
  - sample
  slot_uri: MIXS:0000016
  range: string
samp_md:
  annotations:
    Expected_value: measurement value;enumeration
    Preferred_unit: meter
  description: In non deviated well, measured depth is equal to the true vertical
    depth, TVD (TVD=TVDSS plus the reference or datum it refers to). In deviated wells,
    the MD is the length of trajectory of the borehole measured from the same reference
    or datum. Common datums used are ground level (GL), drilling rig floor (DF), rotary
    table (RT), kelly bushing (KB) and mean sea level (MSL). If "other" is specified,
    please propose entry in "additional info" field
  title: sample measured depth
  examples:
  - value: 1534 meter;MSL
  keywords:
  - depth
  - measurement
  - sample
  string_serialization: '{float} {unit};[GL|DF|RT|KB|MSL|other]'
  slot_uri: MIXS:0000413
samp_name:
  annotations:
    Preferred_unit: ''
  description: A local identifier or name that for the material sample used for extracting
    nucleic acids, and subsequent sequencing. It can refer either to the original
    material collected or to any derived sub-samples. It can have any format, but
    we suggest that you make it concise, unique and consistent within your lab, and
    as informative as possible. INSDC requires every sample name from a single Submitter
    to be unique. Use of a globally unique identifier for the field source_mat_id
    is recommended in addition to sample_name
  title: sample name
  examples:
  - value: ISDsoil1
  in_subset:
  - investigation
  keywords:
  - sample
  slot_uri: MIXS:0001107
  range: string
  required: true
samp_pooling:
  description: Physical combination of several instances of like material, e.g. RNA
    extracted from samples or dishes of cell cultures into one big aliquot of cells.
    Please provide a short description of the samples that were pooled
  title: sample pooling
  examples:
  - value: 5uL of extracted genomic DNA from 5 leaves were pooled
  keywords:
  - pooling
  - sample
  slot_uri: MIXS:0001153
  multivalued: true
  range: string
samp_preserv:
  annotations:
    Preferred_unit: milliliter
  description: Preservative added to the sample (e.g. Rnalater, alcohol, formaldehyde,
    etc.). Where appropriate include volume added (e.g. Rnalater; 2 ml)
  title: preservative added to sample
  keywords:
  - sample
  slot_uri: MIXS:0000463
  range: string
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+);[-+]?[0-9]*\.?[0-9]+ ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{name};{float} {unit}$
    interpolated: true
    partial_match: true
samp_purpose:
  annotations:
    Expected_value: enumeration or {text}
  description: The reason that the sample was collected
  title: purpose of sampling
  examples:
  - value: field trial
  keywords:
  - purpose
  string_serialization: '[active surveillance in response to an outbreak|active surveillance
    not initiated by an outbreak|clinical trial|cluster investigation|environmental
    assessment|farm sample|field trial|for cause|industry internal investigation|market
    sample|passive surveillance|population based studies|research|research and development]
    or {text}'
  slot_uri: MIXS:0001151
samp_rep_biol:
  description: Measurements of biologically distinct samples that show biological
    variation
  title: biological sample replicate
  examples:
  - value: 6 replicates
  keywords:
  - sample
  slot_uri: MIXS:0001226
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
samp_rep_tech:
  description: Repeated measurements of the same sample that show independent measures
    of the noise associated with the equipment and the protocols
  title: technical sample replicate
  examples:
  - value: 10 replicates
  keywords:
  - sample
  slot_uri: MIXS:0001227
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
samp_room_id:
  description: Sampling room number. This ID should be consistent with the designations
    on the building floor plans
  title: sampling room ID or name
  keywords:
  - identifier
  - room
  slot_uri: MIXS:0000244
  range: integer
samp_size:
  description: The total amount or size (volume (ml), mass (g) or area (m2) ) of sample
    collected
  title: amount or size of sample collected
  examples:
  - value: 5 liter
  in_subset:
  - nucleic acid sequence source
  keywords:
  - sample
  - size
  slot_uri: MIXS:0000001
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
samp_sort_meth:
  description: Method by which samples are sorted; open face filter collecting total
    suspended particles, prefilter to remove particles larger than X micrometers in
    diameter, where common values of X would be 10 and 2.5 full size sorting in a
    cascade impactor
  title: sample size sorting method
  keywords:
  - method
  - sample
  - size
  slot_uri: MIXS:0000216
  multivalued: true
  range: string
samp_source_mat_cat:
  annotations:
    Expected_value: GENEPIO:0001237
  description: This is the scientific role or category that the subject organism or
    material has with respect to an investigation.  This field accepts terms listed
    under specimen source material category (http://purl.obolibrary.org/obo/GENEPIO_0001237
    or http://purl.obolibrary.org/obo/OBI_0100051)
  title: sample source material category
  examples:
  - value: environmental (swab or sampling) [GENEPIO:0001732]
  keywords:
  - material
  - sample
  - source
  string_serialization: '{termLabel} [{termID}]'
  slot_uri: MIXS:0001154
samp_stor_device:
  annotations:
    Expected_value: NCIT:C4318
  description: The container used to store the  sample. This field accepts terms listed
    under container (http://purl.obolibrary.org/obo/NCIT_C43186). If the proper descriptor
    is not listed please use text to describe the storage device
  title: sample storage device
  examples:
  - value: Whirl Pak sampling bag [GENEPIO:0002122]
  keywords:
  - device
  - sample
  - storage
  string_serialization: '{text}|{termLabel} [{termID}]'
  slot_uri: MIXS:0001228
samp_stor_media:
  description: The liquid that is added to the sample collection device prior to sampling.
    If the sample is pre-hydrated, indicate the liquid media the sample is pre-hydrated
    with for storage purposes. This field accepts terms listed under microbiological
    culture medium (http://purl.obolibrary.org/obo/MICRO_0000067). If the proper descriptor
    is not listed please use text to describe the sample storage media
  title: sample storage media
  examples:
  - value: peptone water medium [MICRO:0000548]
  keywords:
  - sample
  - storage
  slot_uri: MIXS:0001229
  range: string
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+)|(([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\])$
  structured_pattern:
    syntax: ^{text}|({termLabel} \[{termID}\])$
    interpolated: true
    partial_match: true
samp_store_dur:
  description: Duration for which the sample was stored. Indicate the duration for
    which the sample was stored written in ISO 8601 format
  title: sample storage duration
  examples:
  - value: P1Y6M
  keywords:
  - duration
  - period
  - sample
  - storage
  slot_uri: MIXS:0000116
  range: string
  pattern: ^P(?:(?:\d+D|\d+M(?:\d+D)?|\d+Y(?:\d+M(?:\d+D)?)?)(?:T(?:\d+H(?:\d+M(?:\d+S)?)?|\d+M(?:\d+S)?|\d+S))?|T(?:\d+H(?:\d+M(?:\d+S)?)?|\d+M(?:\d+S)?|\d+S)|\d+W)$
  structured_pattern:
    syntax: ^{duration}$
    interpolated: true
    partial_match: true
samp_store_loc:
  annotations:
    Expected_value: location name
  description: Location at which sample was stored, usually name of a specific freezer/room
  title: sample storage location
  examples:
  - value: Freezer no:5
  keywords:
  - location
  - sample
  - storage
  string_serialization: '{text}'
  slot_uri: MIXS:0000755
samp_store_sol:
  annotations:
    Expected_value: solution name
  description: Solution within which sample was stored, if any
  title: sample storage solution
  examples:
  - value: 5% ethanol
  keywords:
  - sample
  - storage
  string_serialization: '{text}'
  slot_uri: MIXS:0001317
samp_store_temp:
  annotations:
    Preferred_unit: degree Celsius
  description: Temperature at which sample was stored, e.g. -80 degree Celsius
  title: sample storage temperature
  examples:
  - value: -80 degree Celsius
  keywords:
  - sample
  - storage
  - temperature
  slot_uri: MIXS:0000110
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
samp_subtype:
  description: Name of sample sub-type. For example if "sample type" is "Produced
    Water" then subtype could be "Oil Phase" or "Water Phase". If "other" is specified,
    please propose entry in "additional info" field
  title: sample subtype
  examples:
  - value: biofilm
  keywords:
  - sample
  slot_uri: MIXS:0000999
  range: SampSubtypeEnum
  recommended: true
samp_surf_moisture:
  description: Degree of water held on a sampled surface.  If present, user can state
    the degree of water held on surface (intermittent moisture, submerged). If no
    surface moisture is present indicate not present
  title: sample surface moisture
  examples:
  - value: submerged
  keywords:
  - moisture
  - sample
  - surface
  slot_uri: MIXS:0001256
  multivalued: true
  range: SampSurfMoistureEnum
samp_taxon_id:
  description: NCBI taxon id of the sample.  Maybe be a single taxon or mixed taxa
    sample. Use 'synthetic metagenome  for mock community/positive controls, or 'blank
    sample' for negative controls
  title: taxonomy ID of DNA sample
  examples:
  - value: Gut Metagenome [NCBITaxon:749906]
  in_subset:
  - investigation
  keywords:
  - dna
  - identifier
  - sample
  - taxon
  slot_uri: MIXS:0001320
  range: string
  required: true
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[NCBITaxon:\d+\]$
  structured_pattern:
    syntax: ^{text} \[{NCBItaxon_id}\]$
    interpolated: true
    partial_match: true
samp_time_out:
  annotations:
    Expected_value: time
    Preferred_unit: hour
  description: The recent and long term history of outside sampling
  title: sampling time outside
  keywords:
  - time
  string_serialization: '{float}'
  slot_uri: MIXS:0000196
samp_transport_cond:
  annotations:
    Expected_value: measurement value;measurement value
    Preferred_unit: days;degree Celsius
  description: Sample transport duration (in days or hrs) and temperature the sample
    was exposed to (e.g. 5.5 days; 20   C)
  title: sample transport conditions
  examples:
  - value: 5 days;-20 degree Celsius
  keywords:
  - condition
  - sample
  - transport
  string_serialization: '{float} {unit};{float} {unit}'
  slot_uri: MIXS:0000410
samp_transport_cont:
  description: Conatiner in which the sample was stored during transport. Indicate
    the location name
  title: sample transport  container
  examples:
  - value: cooler
  keywords:
  - sample
  - transport
  slot_uri: MIXS:0001230
  range: SampTransportContEnum
samp_transport_dur:
  annotations:
    Preferred_unit: days
  description: The duration of time from when the sample was collected until processed.
    Indicate the duration for which the sample was stored written in ISO 8601 format
  title: sample transport duration
  examples:
  - value: P10D
  keywords:
  - duration
  - period
  - sample
  - transport
  slot_uri: MIXS:0001231
  range: string
  pattern: ^P(?:(?:\d+D|\d+M(?:\d+D)?|\d+Y(?:\d+M(?:\d+D)?)?)(?:T(?:\d+H(?:\d+M(?:\d+S)?)?|\d+M(?:\d+S)?|\d+S))?|T(?:\d+H(?:\d+M(?:\d+S)?)?|\d+M(?:\d+S)?|\d+S)|\d+W)$
  structured_pattern:
    syntax: ^{duration}$
    interpolated: true
    partial_match: true
samp_transport_temp:
  annotations:
    Expected_value: text or measurement value
    Preferred_unit: degree Celsius
  description: Temperature at which sample was transported, e.g. -20 or 4 degree Celsius
  title: sample transport temperature
  examples:
  - value: 4 degree Celsius
  keywords:
  - sample
  - temperature
  - transport
  string_serialization: '{float} {unit} {text}'
  slot_uri: MIXS:0001232
samp_tvdss:
  annotations:
    Expected_value: measurement value or measurement value range
    Preferred_unit: meter
  description: Depth of the sample i.e. The vertical distance between the sea level
    and the sampled position in the subsurface. Depth can be reported as an interval
    for subsurface samples e.g. 1325.75-1362.25 m
  title: sample true vertical depth subsea
  keywords:
  - depth
  - sample
  string_serialization: '{float}-{float} {unit}'
  slot_uri: MIXS:0000409
  recommended: true
samp_type:
  description: The type of material from which the sample was obtained. For the Hydrocarbon
    package, samples include types like core, rock trimmings, drill cuttings, piping
    section, coupon, pigging debris, solid deposit, produced fluid, produced water,
    injected water, swabs, etc. For the Food Package, samples are usually categorized
    as food, body products or tissues, or environmental material. This field accepts
    terms listed under environmental specimen (http://purl.obolibrary.org/obo/GENEPIO_0001246)
  title: sample type
  examples:
  - value: built environment sample [GENEPIO:0001248]
  keywords:
  - sample
  - type
  slot_uri: MIXS:0000998
  range: string
  required: true
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\]$
  structured_pattern:
    syntax: ^{termLabel} \[{termID}\]$
    interpolated: true
    partial_match: true
samp_vol_we_dna_ext:
  annotations:
    Preferred_unit: milliliter, gram, milligram, square centimeter
  description: 'Volume (ml) or mass (g) of total collected sample processed for DNA
    extraction. Note: total sample collected should be entered under the term Sample
    Size (MIXS:0000001)'
  title: sample volume or weight for DNA extraction
  examples:
  - value: 1500 milliliter
  in_subset:
  - nucleic acid sequence source
  keywords:
  - dna
  - sample
  - volume
  - weight
  slot_uri: MIXS:0000111
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
samp_weather:
  description: The weather on the sampling day
  title: sampling day weather
  examples:
  - value: foggy
  keywords:
  - day
  - weather
  slot_uri: MIXS:0000827
  range: SampWeatherEnum
samp_well_name:
  description: Name of the well (e.g. BXA1123) where sample was taken
  title: sample well name
  keywords:
  - sample
  slot_uri: MIXS:0000296
  range: string
  recommended: true
saturates_pc:
  annotations:
    Preferred_unit: percent
  description: 'Saturate, Aromatic, Resin and Asphaltene  (SARA) is an analysis method
    that divides  crude oil  components according to their polarizability and polarity.
    There are three main methods to obtain SARA results. The most popular one is known
    as the Iatroscan TLC-FID and is referred to as IP-143 (source: https://en.wikipedia.org/wiki/Saturate,_aromatic,_resin_and_asphaltene)'
  title: saturates wt%
  slot_uri: MIXS:0000131
  range: string
  recommended: true
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+);[-+]?[0-9]*\.?[0-9]+ ([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{name};{float} {unit}$
    interpolated: true
    partial_match: true
sc_lysis_approach:
  description: Method used to free DNA from interior of the cell(s) or particle(s)
  title: single cell or viral particle lysis approach
  examples:
  - value: enzymatic
  in_subset:
  - sequencing
  keywords:
  - particle
  - single
  slot_uri: MIXS:0000076
  range: ScLysisApproachEnum
sc_lysis_method:
  annotations:
    Expected_value: kit, protocol name
  description: Name of the kit or standard protocol used for cell(s) or particle(s)
    lysis
  title: single cell or viral particle lysis kit protocol
  examples:
  - value: ambion single cell lysis kit
  in_subset:
  - sequencing
  keywords:
  - kit
  - particle
  - protocol
  - single
  string_serialization: '{text}'
  slot_uri: MIXS:0000054
season:
  annotations:
    Expected_value: autumn [NCIT:C94733], spring [NCIT:C94731], summer [NCIT:C94732],
      winter [NCIT:C94730]
  description: The season when sampling occurred. Any of the four periods into which
    the year is divided by the equinoxes and solstices. This field accepts terms listed
    under season (http://purl.obolibrary.org/obo/NCIT_C94729)
  title: season
  comments:
  - autumn [NCIT:C94733] does not match ^\\S+.*\\S+ \\[[a-zA-Z]{2,}:\\d+\\]$
  - would require ^\\S+.*\\S+ \\[[a-zA-Z]{2,}:[a-zA-Z0-9]\\]$
  examples:
  - value: autumn [NCIT:C94733]
  keywords:
  - season
  string_serialization: '{termLabel} [{termID}]'
  slot_uri: MIXS:0000829
  range: string
  pattern: ^\S+.*\S+ \[[a-zA-Z]{2,}:[a-zA-Z0-9]+\]$
season_environment:
  description: Treatment involving an exposure to a particular season (e.g. Winter,
    summer, rabi, rainy etc.), treatment regimen including how many times the treatment
    was repeated, how long each treatment lasted, and the start and end time of the
    entire treatment
  title: seasonal environment
  examples:
  - value: rainy;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M
  keywords:
  - environment
  - season
  slot_uri: MIXS:0001068
  multivalued: true
  range: string
season_humidity:
  description: Average humidity of the region throughout the growing season
  title: mean seasonal humidity
  comments:
  - percent or float?
  examples:
  - value: '0.25'
  keywords:
  - humidity
  - mean
  - season
  slot_uri: MIXS:0001148
  range: float
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
season_precpt:
  annotations:
    Preferred_unit: millimeter
  description: The average of all seasonal precipitation values known, or an estimated
    equivalent value derived by such methods as regional indexes or Isohyetal maps
  title: mean seasonal precipitation
  examples:
  - value: 75 millimeters
  keywords:
  - mean
  - season
  slot_uri: MIXS:0000645
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
season_temp:
  annotations:
    Preferred_unit: degree Celsius
  description: Mean seasonal temperature
  title: mean seasonal temperature
  examples:
  - value: 18 degree Celsius
  keywords:
  - mean
  - season
  - temperature
  slot_uri: MIXS:0000643
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
season_use:
  description: The seasons the space is occupied
  title: seasonal use
  examples:
  - value: Winter
  keywords:
  - season
  - use
  slot_uri: MIXS:0000830
  range: SeasonUseEnum
secondary_treatment:
  annotations:
    Expected_value: secondary treatment type
  description: The process for substantially degrading the biological content of the
    sewage
  title: secondary treatment
  keywords:
  - secondary
  - treatment
  string_serialization: '{text}'
  slot_uri: MIXS:0000351
sediment_type:
  description: Information about the sediment type based on major constituents
  title: sediment type
  examples:
  - value: biogenous
  keywords:
  - sediment
  - type
  slot_uri: MIXS:0001078
  range: SedimentTypeEnum
seq_meth:
  description: Sequencing machine used. Where possible the term should be taken from
    the OBI list of DNA sequencers (http://purl.obolibrary.org/obo/OBI_0400103)
  title: sequencing method
  examples:
  - value: 454 Genome Sequencer FLX [OBI:0000702]
  in_subset:
  - sequencing
  keywords:
  - method
  slot_uri: MIXS:0000050
  range: string
  required: true
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+)|(([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\])$
  structured_pattern:
    syntax: ^{text}|({termLabel} \[{termID}\])$
    interpolated: true
    partial_match: true
seq_quality_check:
  annotations:
    Expected_value: none or manually edited
  description: Indicate if the sequence has been called by automatic systems (none)
    or undergone a manual editing procedure (e.g. by inspecting the raw data or chromatograms).
    Applied only for sequences that are not submitted to SRA,ENA or DRA
  title: sequence quality check
  examples:
  - value: none
  in_subset:
  - sequencing
  keywords:
  - quality
  slot_uri: MIXS:0000051
  range: SeqQualityCheckEnum
sequencing_kit:
  annotations:
    Expected_value: name of sequencing kit used
  description: Pre-filled, ready-to-use reagent cartridges. Used to produce improved
    chemistry, cluster density and read length as well as improve quality (Q) scores.
    Reagent components are encoded to interact with the sequencing system to validate
    compatibility with user-defined applications. Indicate name of the sequencing
    kit
  title: sequencing kit
  examples:
  - value: NextSeq 500/550 High Output Kit v2.5 (75 Cycles)
  keywords:
  - kit
  string_serialization: '{text}'
  slot_uri: MIXS:0001155
sequencing_location:
  description: The location the sequencing run was performed. Indicate the name of
    the lab or core facility where samples were sequenced
  title: sequencing location
  examples:
  - value: University of Maryland Genomics Resource Center
  keywords:
  - location
  slot_uri: MIXS:0001156
  range: string
serovar_or_serotype:
  description: A characterization of a cell or microorganism based on the antigenic
    properties of the molecules on its surface. Indicate the name of a serovar or
    serotype of interest. This field accepts terms under organism (http://purl.obolibrary.org/obo/NCIT_C14250).
    This field also accepts identification numbers from NCBI under https://www.ncbi.nlm.nih.gov/taxonomy
  title: serovar or serotype
  examples:
  - value: Escherichia coli strain O157:H7 [NCIT:C86883]
  slot_uri: MIXS:0001157
  multivalued: true
  range: string
  pattern: ^(([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\])|[1-9][0-9]*$
  structured_pattern:
    syntax: ^({termLabel} \[{termID}\])|{integer}$
    interpolated: true
    partial_match: true
sewage_type:
  annotations:
    Expected_value: sewage type name
  description: Type of wastewater treatment plant as municipial or industrial
  title: sewage type
  keywords:
  - type
  string_serialization: '{text}'
  slot_uri: MIXS:0000215
sexual_act:
  annotations:
    Expected_value: partner sex;frequency
  description: Current sexual partner and frequency of sex
  title: sexual activity
  string_serialization: '{text}'
  slot_uri: MIXS:0000285
shad_dev_water_mold:
  description: Signs of the presence of mold or mildew on the shading device
  title: shading device signs of water/mold
  examples:
  - value: no presence of mold visible
  keywords:
  - device
  slot_uri: MIXS:0000834
  range: MoldVisibilityEnum
shading_device_cond:
  description: The physical condition of the shading device at the time of sampling
  title: shading device condition
  examples:
  - value: new
  keywords:
  - condition
  - device
  slot_uri: MIXS:0000831
  range: DamagedRupturedEnum
shading_device_loc:
  description: The location of the shading device in relation to the built structure
  title: shading device location
  examples:
  - value: exterior
  keywords:
  - device
  - location
  slot_uri: MIXS:0000832
  range: ShadingDeviceLocEnum
shading_device_mat:
  annotations:
    Expected_value: material name
  description: The material the shading device is composed of
  title: shading device material
  keywords:
  - device
  - material
  string_serialization: '{text}'
  slot_uri: MIXS:0000245
shading_device_type:
  description: The type of shading device
  title: shading device type
  examples:
  - value: slatted aluminum
    description: was slatted aluminum awning
  keywords:
  - device
  - type
  slot_uri: MIXS:0000835
  range: ShadingDeviceTypeEnum
sieving:
  annotations:
    Expected_value: design name and/or size;amount
  description: Collection design of pooled samples and/or sieve size and amount of
    sample sieved
  title: sieving
  string_serialization: '{text};{float} {unit}'
  slot_uri: MIXS:0000322
silicate:
  annotations:
    Preferred_unit: micromole per liter
  description: Concentration of silicate
  title: silicate
  examples:
  - value: 0.05 micromole per liter
  slot_uri: MIXS:0000184
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
sim_search_meth:
  description: Tool used to compare ORFs with database, along with version and cutoffs
    used
  title: similarity search method
  examples:
  - value: HMMER3;3.1b2;hmmsearch, cutoff of 50 on score
  in_subset:
  - sequencing
  keywords:
  - method
  slot_uri: MIXS:0000063
  range: string
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+);([^\s-]{1,2}|[^\s-]+.+[^\s-]+);([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{software};{version};{parameters}$
    interpolated: true
    partial_match: true
size_frac:
  annotations:
    Expected_value: filter size value range
  description: Filtering pore size used in sample preparation
  title: size fraction selected
  examples:
  - value: 0-0.22 micrometer
  in_subset:
  - nucleic acid sequence source
  keywords:
  - fraction
  - size
  string_serialization: '{float}-{float} {unit}'
  slot_uri: MIXS:0000017
size_frac_low:
  annotations:
    Preferred_unit: micrometer
  description: Refers to the mesh/pore size used to pre-filter/pre-sort the sample.
    Materials larger than the size threshold are excluded from the sample
  title: size-fraction lower threshold
  examples:
  - value: 0.2 micrometer
  keywords:
  - lower
  slot_uri: MIXS:0000735
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
size_frac_up:
  annotations:
    Preferred_unit: micrometer
  description: Mesh or pore size of the device used to retain the sample. Materials
    smaller than the size threshold are excluded from the sample
  title: size-fraction upper threshold
  examples:
  - value: 20 micrometer
  keywords:
  - upper
  slot_uri: MIXS:0000736
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
slope_aspect:
  annotations:
    Preferred_unit: degree
  description: The direction a slope faces. While looking down a slope use a compass
    to record the direction you are facing (direction or degrees); e.g., nw or 315
    degrees. This measure provides an indication of sun and wind exposure that will
    influence soil temperature and evapotranspiration
  title: slope aspect
  keywords:
  - slope
  slot_uri: MIXS:0000647
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
slope_gradient:
  annotations:
    Preferred_unit: percentage
  description: Commonly called 'slope'. The angle between ground surface and a horizontal
    line (in percent). This is the direction that overland water would flow. This
    measure is usually taken with a hand level meter or clinometer
  title: slope gradient
  keywords:
  - slope
  slot_uri: MIXS:0000646
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
sludge_retent_time:
  annotations:
    Preferred_unit: hours
  description: The time activated sludge remains in reactor
  title: sludge retention time
  keywords:
  - time
  slot_uri: MIXS:0000669
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
smoker:
  description: Specification of smoking status
  title: smoker
  examples:
  - value: 'yes'
  slot_uri: MIXS:0000262
  range: boolean
sodium:
  annotations:
    Preferred_unit: milligram per liter, parts per million
  description: Sodium concentration in the sample
  title: sodium
  examples:
  - value: 10.5 milligram per liter
  slot_uri: MIXS:0000428
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
soil_conductivity:
  annotations:
    Preferred_unit: milliSiemens per centimeter
  title: soil conductivity
  examples:
  - value: 10 milliSiemens per centimeter
  keywords:
  - soil
  slot_uri: MIXS:0001158
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
soil_cover:
  annotations:
    Expected_value: subclass of 'environmental material', http://purl.obolibrary.org/obo/ENVO_00010483
  description: Material covering the sampled soil. This field accepts terms under
    ENVO:00010483, environmental material
  title: soil cover
  examples:
  - value: bare soil [ENVO01001616]
  keywords:
  - soil
  string_serialization: bare soil [ENVO:01001616]
  slot_uri: MIXS:0001159
soil_horizon:
  description: Specific layer in the land area which measures parallel to the soil
    surface and possesses physical characteristics which differ from the layers above
    and beneath
  title: soil horizon
  examples:
  - value: A horizon
  keywords:
  - horizon
  - soil
  slot_uri: MIXS:0001082
  range: SoilHorizonEnum
soil_pH:
  title: soil pH
  examples:
  - value: '7.2'
  keywords:
  - ph
  - soil
  slot_uri: MIXS:0001160
  range: float
soil_porosity:
  annotations:
    Expected_value: percent porosity
    Preferred_unit: percentage
  description: Porosity of soil or deposited sediment is volume of voids divided by
    the total volume of sample
  title: soil sediment porosity
  examples:
  - value: '0.2'
  keywords:
  - porosity
  - sediment
  - soil
  string_serialization: '{percentage}'
  slot_uri: MIXS:0001162
soil_temp:
  annotations:
    Preferred_unit: degree Celsius
  description: Temperature of soil at the time of sampling
  title: soil temperature
  examples:
  - value: 25 degrees Celsius
  keywords:
  - soil
  - temperature
  slot_uri: MIXS:0001163
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
soil_texture:
  description: The relative proportion of different grain sizes of mineral particles
    in a soil, as described using a standard system; express as % sand (50 um to 2
    mm), silt (2 um to 50 um), and clay (<2 um) with textural name (e.g., silty clay
    loam) optional
  title: soil texture
  keywords:
  - soil
  - texture
  slot_uri: MIXS:0000335
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
soil_texture_class:
  description: One of the 12 soil texture classes use to describe soil texture based
    on the relative proportion of different grain sizes  of mineral particles [sand
    (50 um to 2 mm), silt (2 um to 50 um), and clay (<2 um)] in a soil
  title: soil texture classification
  examples:
  - value: silty clay loam
  keywords:
  - classification
  - soil
  - texture
  slot_uri: MIXS:0001164
  range: SoilTextureClassEnum
soil_texture_meth:
  description: Reference or method used in determining soil texture
  title: soil texture method
  examples:
  - value: https://uwlab.soils.wisc.edu/wp-content/uploads/sites/17/2015/09/particle_size.pdf
  keywords:
  - method
  - soil
  - texture
  slot_uri: MIXS:0000336
  range: string
  pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$$
  structured_pattern:
    syntax: ^{PMID}|{DOI}|{URL}$
    interpolated: true
    partial_match: true
soil_type:
  annotations:
    Expected_value: ENVO:00001998
  description: Description of the soil type or classification. This field accepts
    terms under soil (http://purl.obolibrary.org/obo/ENVO_00001998).  Multiple terms
    can be separated by pipes
  title: soil type
  examples:
  - value: plinthosol [ENVO:00002250]
  keywords:
  - soil
  - type
  slot_uri: MIXS:0000332
soil_type_meth:
  description: Reference or method used in determining soil series name or other lower-level
    classification
  title: soil type method
  examples:
  - value: https://www.lrh.usace.army.mil/Portals/38/docs/PR/BluestoneSFEIS/Appendix%20K-Soil%20Descriptions.pdf
  keywords:
  - method
  - soil
  - type
  slot_uri: MIXS:0000334
  range: string
  pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$$
  structured_pattern:
    syntax: ^{PMID}|{DOI}|{URL}$
    interpolated: true
    partial_match: true
solar_irradiance:
  annotations:
    Preferred_unit: kilowatts per square meter per day, ergs per square centimeter
      per second
  description: The amount of solar energy that arrives at a specific area of a surface
    during a specific time interval
  title: solar irradiance
  examples:
  - value: 1.36 kilowatts per square meter per day
  slot_uri: MIXS:0000112
  multivalued: true
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
soluble_inorg_mat:
  annotations:
    Expected_value: soluble inorganic material name;measurement value
    Preferred_unit: gram, microgram, mole per liter, gram per liter, parts per million
  description: Concentration of substances such as ammonia, road-salt, sea-salt, cyanide,
    hydrogen sulfide, thiocyanates, thiosulfates, etc
  title: soluble inorganic material
  keywords:
  - inorganic
  - material
  - soluble
  string_serialization: '{text};{float} {unit}'
  slot_uri: MIXS:0000672
  multivalued: true
soluble_org_mat:
  annotations:
    Expected_value: soluble organic material name;measurement value
    Preferred_unit: gram, microgram, mole per liter, gram per liter, parts per million
  description: Concentration of substances such as urea, fruit sugars, soluble proteins,
    drugs, pharmaceuticals, etc
  title: soluble organic material
  keywords:
  - material
  - organic
  - soluble
  string_serialization: '{text};{float} {unit}'
  slot_uri: MIXS:0000673
  multivalued: true
soluble_react_phosp:
  annotations:
    Preferred_unit: micromole per liter, milligram per liter, parts per million
  description: Concentration of soluble reactive phosphorus
  title: soluble reactive phosphorus
  examples:
  - value: 0.1 milligram per liter
  keywords:
  - phosphorus
  - soluble
  slot_uri: MIXS:0000738
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
sop:
  annotations:
    Expected_value: reference to SOP
  description: Standard operating procedures used in assembly and/or annotation of
    genomes, metagenomes or environmental sequences
  title: relevant standard operating procedures
  examples:
  - value: http://press.igsb.anl.gov/earthmicrobiome/protocols-and-standards/its/
  in_subset:
  - sequencing
  keywords:
  - procedures
  string_serialization: '{PMID}|{DOI}|{URL}'
  slot_uri: MIXS:0000090
  multivalued: true
sort_tech:
  description: Method used to sort/isolate cells or particles of interest
  title: sorting technology
  examples:
  - value: optical manipulation
  in_subset:
  - sequencing
  slot_uri: MIXS:0000075
  range: SortTechEnum
source_mat_id:
  annotations:
    Expected_value: 'for cultures of microorganisms: identifiers for two culture collections;
      for other material a unique arbitrary identifer'
  description: A unique identifier assigned to a material sample (as defined by http://rs.tdwg.org/dwc/terms/materialSampleID,
    and as opposed to a particular digital record of a material sample) used for extracting
    nucleic acids, and subsequent sequencing. The identifier can refer either to the
    original material collected or to any derived sub-samples. The INSDC qualifiers
    /specimen_voucher, /bio_material, or /culture_collection may or may not share
    the same value as the source_mat_id field. For instance, the /specimen_voucher
    qualifier and source_mat_id may both contain 'UAM:Herps:14' , referring to both
    the specimen voucher and sampled tissue with the same identifier. However, the
    /culture_collection qualifier may refer to a value from an initial culture (e.g.
    ATCC:11775) while source_mat_id would refer to an identifier from some derived
    culture from which the nucleic acids were extracted (e.g. xatc123 or ark:/2154/R2)
  title: source material identifiers
  examples:
  - value: MPI012345
  in_subset:
  - nucleic acid sequence source
  keywords:
  - identifier
  - material
  - source
  string_serialization: '{text}'
  slot_uri: MIXS:0000026
  multivalued: true
source_uvig:
  annotations:
    Expected_value: enumeration
  description: Type of dataset from which the UViG was obtained
  title: source of UViGs
  examples:
  - value: viral fraction metagenome (virome)
  in_subset:
  - nucleic acid sequence source
  keywords:
  - source
  string_serialization: '[metagenome (not viral targeted)|viral fraction metagenome
    (virome)|sequence-targeted metagenome|metatranscriptome (not viral targeted)|viral
    fraction RNA metagenome (RNA virome)|sequence-targeted RNA metagenome|microbial
    single amplified genome (SAG)|viral single amplified genome (vSAG)|isolate microbial
    genome|other]'
  slot_uri: MIXS:0000035
space_typ_state:
  description: Customary or normal state of the space
  title: space typical state
  examples:
  - value: typically occupied
  slot_uri: MIXS:0000770
  range: SpaceTypStateEnum
  required: true
spec_intended_cons:
  description: Food consumer type, human or animal, for which the food product is
    produced and marketed. This field accepts terms listed under food consumer group
    (http://purl.obolibrary.org/obo/FOODON_03510136)
  title: specific intended consumer
  examples:
  - value: senior as food consumer [FOODON:03510254]
  keywords:
  - consumer
  slot_uri: MIXS:0001234
  multivalued: true
  range: string
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\]$
  structured_pattern:
    syntax: ^{termLabel} \[{termID}\]$
    interpolated: true
    partial_match: true
special_diet:
  annotations:
    Expected_value: enumeration
  description: Specification of special diet; can include multiple special diets
  title: special diet
  examples:
  - value: other:vegan
  keywords:
  - diet
  string_serialization: '[low carb|reduced calorie|vegetarian|other(to be specified)]'
  slot_uri: MIXS:0000905
  multivalued: true
specific:
  description: 'The building specifications. If design is chosen, indicate phase:
    conceptual, schematic, design development, construction documents'
  title: specifications
  examples:
  - value: construction
  slot_uri: MIXS:0000836
  range: SpecificEnum
specific_host:
  annotations:
    Expected_value: host scientific name, taxonomy ID
  description: Report the host's taxonomic name and/or NCBI taxonomy ID
  title: host scientific name
  examples:
  - value: Homo sapiens and/or 9606
  in_subset:
  - nucleic acid sequence source
  keywords:
  - host
  - host.
  string_serialization: '{text}|{NCBI taxid}'
  slot_uri: MIXS:0000029
specific_humidity:
  annotations:
    Preferred_unit: gram of air, kilogram of air
  description: The mass of water vapour in a unit mass of moist air, usually expressed
    as grams of vapour per kilogram of air, or, in air conditioning, as grains per
    pound
  title: specific humidity
  examples:
  - value: 15 per kilogram of air
  keywords:
  - humidity
  slot_uri: MIXS:0000214
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
spikein_AMR:
  annotations:
    Expected_value: measurement value ARO:3004299
  description: Qualitative description of a microbial response to antimicrobial agents.
    Bacteria may be susceptible or resistant to a broad range of antibiotic drugs
    or drug classes, with several intermediate states or phases. This field accepts
    terms under antimicrobial phenotype (http://purl.obolibrary.org/obo/ARO_3004299)
  title: antimicrobial phenotype of spike-in bacteria
  examples:
  - value: wild type [ARO:3004432]
  keywords:
  - antimicrobial
  - spike
  string_serialization: '{float} {unit};{termLabel} [{termID}]'
  slot_uri: MIXS:0001235
  multivalued: true
spikein_antibiotic:
  annotations:
    Expected_value: drug name; concentration
  description: Antimicrobials used in research study to assess effects of exposure
    on microbiome of a specific site.  Please list antimicrobial, common name and/or
    class and concentration used for spike-in
  title: spike-in with antibiotics
  examples:
  - value: Tetracycline at 5 mg/ml
  keywords:
  - spike
  string_serialization: '{text} {integer}'
  slot_uri: MIXS:0001171
  multivalued: true
spikein_count:
  annotations:
    Expected_value: organism name;measurement value;enumeration
    Preferred_unit: colony forming units per milliliter; colony forming units per
      gram of dry weight
  description: 'Total cell count of any organism (or group of organisms) per gram,
    volume or area of sample, should include name of organism followed by count. The
    method that was used for the enumeration (e.g. qPCR, atp, mpn, etc.) should also
    be provided (example: total prokaryotes; 3.5e7 cells per ml; qPCR)'
  title: spike-in organism count
  examples:
  - value: total prokaryotes;3.5e7 colony forming units per milliliter;qPCR
  keywords:
  - count
  - organism
  - spike
  string_serialization: '{text};{float} {unit};[ATP|MPN|qPCR|other]'
  slot_uri: MIXS:0001335
spikein_growth_med:
  description: A liquid or gel containing nutrients, salts, and other factors formulated
    to support the growth of microorganisms, cells, or plants (National Cancer Institute
    Thesaurus).  A growth medium is a culture medium which has the disposition to
    encourage growth of particular bacteria to the exclusion of others in the same
    growth environment.  In this case, list the culture medium used to propagate the
    spike-in bacteria during preparation of spike-in inoculum. This field accepts
    terms listed under microbiological culture medium (http://purl.obolibrary.org/obo/MICRO_0000067).
    If the proper descriptor is not listed please use text to describe the spike in
    growth media
  title: spike-in growth medium
  examples:
  - value: LB broth [MCO:0000036]
  keywords:
  - growth
  - spike
  slot_uri: MIXS:0001169
  multivalued: true
  range: string
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+)|(([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\])$
  structured_pattern:
    syntax: ^{text}|({termLabel} \[{termID}\])$
    interpolated: true
    partial_match: true
spikein_metal:
  annotations:
    Expected_value: heavy metal name or chemical symbol; concentration
  description: Heavy metals used in research study to assess effects of exposure on
    microbiome of a specific site.  Please list heavy metals and concentration used
    for spike-in
  title: spike-in with heavy metals
  examples:
  - value: Cd at 20 ppm
  keywords:
  - heavy
  - spike
  string_serialization: '{text} {integer}'
  slot_uri: MIXS:0001172
  multivalued: true
spikein_org:
  description: Taxonomic information about the spike-in organism(s). This field accepts
    terms under organism (http://purl.obolibrary.org/obo/NCIT_C14250). This field
    also accepts identification numbers from NCBI under https://www.ncbi.nlm.nih.gov/taxonomy.
    Multiple terms can be separated by pipes
  title: spike in organism
  examples:
  - value: Listeria monocytogenes [NCIT:C86502]|28901
  keywords:
  - organism
  - spike
  slot_uri: MIXS:0001167
  multivalued: true
  range: string
  pattern: ^(([^\s-]{1,2}|[^\s-]+.+[^\s-]+) \[[a-zA-Z]{2,}:[a-zA-Z0-9]\d+\])|[1-9][0-9]*$
  structured_pattern:
    syntax: ^({termLabel} \[{termID}\])|{integer}$
    interpolated: true
    partial_match: true
spikein_serovar:
  annotations:
    Expected_value: NCIT:C14250 or antigenic formula or serovar name
  description: Taxonomic information about the spike-in organism(s) at the serovar
    or serotype level. This field accepts terms under organism (http://purl.obolibrary.org/obo/NCIT_C14250).
    This field also accepts identification numbers from NCBI under https://www.ncbi.nlm.nih.gov/taxonomy.
    Multiple terms can be separated by pipes
  title: spike-in bacterial serovar or serotype
  examples:
  - value: Escherichia coli strain O157:H7 [NCIT:C86883]|83334
  keywords:
  - spike
  string_serialization: '{termLabel} [{termID}]|{integer}'
  slot_uri: MIXS:0001168
  multivalued: true
spikein_strain:
  annotations:
    Expected_value: NCIT:C14250 or NCBI taxid or text
  description: Taxonomic information about the spike-in organism(s) at the strain
    level. This field accepts terms under organism (http://purl.obolibrary.org/obo/NCIT_C14250).
    This field also accepts identification numbers from NCBI under https://www.ncbi.nlm.nih.gov/taxonomy.
    Multiple terms can be separated by pipes
  title: spike-in microbial strain
  examples:
  - value: '169963'
  keywords:
  - microbial
  - spike
  string_serialization: '{termLabel} [{termID}]|{integer}'
  slot_uri: MIXS:0001170
  multivalued: true
sr_dep_env:
  description: Source rock depositional environment (https://en.wikipedia.org/wiki/Source_rock).
    If "other" is specified, please propose entry in "additional info" field
  title: source rock depositional environment
  examples:
  - value: Marine
  keywords:
  - environment
  - source
  slot_uri: MIXS:0000996
  range: SrDepEnvEnum
sr_geol_age:
  description: 'Geological age of source rock (Additional info: https://en.wikipedia.org/wiki/Period_(geology)).
    If "other" is specified, please propose entry in "additional info" field'
  title: source rock geological age
  examples:
  - value: Silurian
  keywords:
  - age
  - source
  slot_uri: MIXS:0000997
  range: GeolAgeEnum
sr_kerog_type:
  description: 'Origin of kerogen. Type I: Algal (aquatic), Type II: planktonic and
    soft plant material (aquatic or terrestrial), Type III: terrestrial woody/ fibrous
    plant material (terrestrial), Type IV: oxidized recycled woody debris (terrestrial)
    (additional information: https://en.wikipedia.org/wiki/Kerogen). If "other" is
    specified, please propose entry in "additional info" field'
  title: source rock kerogen type
  examples:
  - value: Type IV
  keywords:
  - source
  - type
  slot_uri: MIXS:0000994
  range: SrKerogTypeEnum
sr_lithology:
  description: Lithology of source rock (https://en.wikipedia.org/wiki/Source_rock).
    If "other" is specified, please propose entry in "additional info" field
  title: source rock lithology
  examples:
  - value: Coal
  keywords:
  - lithology
  - source
  slot_uri: MIXS:0000995
  range: SrLithologyEnum
standing_water_regm:
  description: Treatment involving an exposure to standing water during a plant's
    life span, types can be flood water or standing water, treatment regimen including
    how many times the treatment was repeated, how long each treatment lasted, and
    the start and end time of the entire treatment; can include multiple regimens
  title: standing water regimen
  examples:
  - value: standing water;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M
  keywords:
  - regimen
  - water
  slot_uri: MIXS:0001069
  multivalued: true
  range: string
ster_meth_samp_room:
  annotations:
    Expected_value: ENVO:01001026
  description: The method used to sterilize the sampling room. This field accepts
    terms listed under electromagnetic radiation (http://purl.obolibrary.org/obo/ENVO_01001026).
    If the proper descriptor is not listed, please use text to describe the sampling
    room sterilization method. Multiple terms can be separated by pipes
  title: sampling room sterilization method
  examples:
  - value: ultraviolet radiation [ENVO:21001216]|infrared radiation [ENVO:21001214]
  keywords:
  - method
  - room
  string_serialization: '{text}|{termLabel} [{termID}]'
  slot_uri: MIXS:0001259
  multivalued: true
store_cond:
  annotations:
    Expected_value: storage condition type;duration
  description: Explain how and for how long the soil sample was stored before DNA
    extraction (fresh/frozen/other)
  title: storage conditions
  examples:
  - value: -20 degree Celsius freezer;P2Y10D
  keywords:
  - condition
  - storage
  string_serialization: '{text};{period}'
  slot_uri: MIXS:0000327
study_complt_stat:
  annotations:
    Expected_value: YES or NO due to (1)adverse event (2) non-compliance (3) lost
      to follow up (4)other-specify
  description: Specification of study completion status, if no the reason should be
    specified
  title: study completion status
  examples:
  - value: no;non-compliance
  keywords:
  - status
  string_serialization: '{boolean};[adverse event|non-compliance|lost to follow up|other-specify]'
  slot_uri: MIXS:0000898
study_design:
  annotations:
    Expected_value: OBI:0500000
  description: A plan specification comprised of protocols (which may specify how
    and what kinds of data will be gathered) that are executed as part of an investigation
    and is realized during a study design execution. This field accepts terms under
    study design (http://purl.obolibrary.org/obo/OBI_0500000). If the proper descriptor
    is not listed please use text to describe the study design. Multiple terms can
    be separated by pipes
  title: study design
  examples:
  - value: in vitro design [OBI:0001285]
  string_serialization: '{text}|{termLabel} [{termID}]'
  slot_uri: MIXS:0001236
  multivalued: true
study_inc_dur:
  annotations:
    Preferred_unit: hours or days
  description: Sample incubation duration if unpublished or unvalidated method is
    used. Indicate the timepoint written in ISO 8601 format
  title: study incubation duration
  examples:
  - value: PT24H
  keywords:
  - duration
  - incubation
  - period
  slot_uri: MIXS:0001237
  range: string
  pattern: ^P(?:(?:\d+D|\d+M(?:\d+D)?|\d+Y(?:\d+M(?:\d+D)?)?)(?:T(?:\d+H(?:\d+M(?:\d+S)?)?|\d+M(?:\d+S)?|\d+S))?|T(?:\d+H(?:\d+M(?:\d+S)?)?|\d+M(?:\d+S)?|\d+S)|\d+W)$
  structured_pattern:
    syntax: ^{duration}$
    interpolated: true
    partial_match: true
study_inc_temp:
  annotations:
    Preferred_unit: degree Celsius
  description: Sample incubation temperature if unpublished or unvalidated method
    is used
  title: study incubation temperature
  examples:
  - value: 37 degree Celsius
  keywords:
  - incubation
  - temperature
  slot_uri: MIXS:0001238
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
study_timecourse:
  annotations:
    Preferred_unit: dpi
  description: For time-course research studies involving samples of the food commodity,
    indicate the total duration of the time-course study
  title: time-course duration
  examples:
  - value: 2 days post inoculation
  keywords:
  - duration
  - period
  - time
  slot_uri: MIXS:0001239
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
study_tmnt:
  annotations:
    Expected_value: MCO:0000866
  description: A process in which the act is intended to modify or alter some other
    material entity.  From the study design, each treatment is comprised of one level
    of one or multiple factors. This field accepts terms listed under treatment (http://purl.obolibrary.org/obo/MCO_0000866).
    If the proper descriptor is not listed please use text to describe the study treatment.
    Multiple terms can be separated by one or more pipes
  title: study treatment
  examples:
  - value: Factor A|spike-in|levels high, medium, low
  keywords:
  - treatment
  string_serialization: '{text}|{termLabel} [{termID}]'
  slot_uri: MIXS:0001240
  multivalued: true
subspecf_gen_lin:
  annotations:
    Expected_value: Genetic lineage below lowest rank of NCBI taxonomy, which is subspecies,
      e.g. serovar, biotype, ecotype, variety, cultivar
  description: Information about the genetic distinctness of the sequenced organism
    below the subspecies level, e.g., serovar, serotype, biotype, ecotype, or any
    relevant genetic typing schemes like Group I plasmid. Subspecies should not be
    recorded in this term, but in the NCBI taxonomy. Supply both the lineage name
    and the lineage rank separated by a colon, e.g., biovar:abc123
  title: subspecific genetic lineage
  examples:
  - value: serovar:Newport
  in_subset:
  - nucleic acid sequence source
  keywords:
  - lineage
  string_serialization: '{rank name}:{text}'
  slot_uri: MIXS:0000020
substructure_type:
  description: The substructure or under building is that largely hidden section of
    the building which is built off the foundations to the ground floor level
  title: substructure type
  examples:
  - value: basement
  keywords:
  - type
  slot_uri: MIXS:0000767
  multivalued: true
  range: SubstructureTypeEnum
sulfate:
  annotations:
    Preferred_unit: micromole per liter, milligram per liter, parts per million
  description: Concentration of sulfate in the sample
  title: sulfate
  examples:
  - value: 5 micromole per liter
  keywords:
  - sulfate
  slot_uri: MIXS:0000423
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
sulfate_fw:
  annotations:
    Preferred_unit: milligram per liter
  description: Original sulfate concentration in the hydrocarbon resource
  title: sulfate in formation water
  keywords:
  - sulfate
  - water
  slot_uri: MIXS:0000407
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
sulfide:
  annotations:
    Preferred_unit: micromole per liter, milligram per liter, parts per million
  description: Concentration of sulfide in the sample
  title: sulfide
  examples:
  - value: 2 micromole per liter
  keywords:
  - sulfide
  slot_uri: MIXS:0000424
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
surf_air_cont:
  description: Contaminant identified on surface
  title: surface-air contaminant
  examples:
  - value: radon
  slot_uri: MIXS:0000759
  multivalued: true
  range: SurfAirContEnum
  recommended: true
surf_humidity:
  annotations:
    Preferred_unit: percentage
  description: 'Surfaces: water activity as a function of air and material moisture'
  title: surface humidity
  comments:
  - percent or float?
  examples:
  - value: '0.1'
  keywords:
  - humidity
  - surface
  slot_uri: MIXS:0000123
  range: float
  recommended: true
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
surf_material:
  description: Surface materials at the point of sampling
  title: surface material
  examples:
  - value: wood
  keywords:
  - material
  - surface
  slot_uri: MIXS:0000758
  range: SurfMaterialEnum
surf_moisture:
  annotations:
    Preferred_unit: parts per million, gram per cubic meter, gram per square meter
  description: Water held on a surface
  title: surface moisture
  examples:
  - value: 0.01 gram per square meter
  keywords:
  - moisture
  - surface
  slot_uri: MIXS:0000128
  range: string
  recommended: true
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
surf_moisture_ph:
  description: ph measurement of surface
  title: surface moisture pH
  examples:
  - value: '7'
  keywords:
  - moisture
  - ph
  - surface
  slot_uri: MIXS:0000760
  range: float
  recommended: true
surf_temp:
  annotations:
    Preferred_unit: degree Celsius
  description: Temperature of the surface at the time of sampling
  title: surface temperature
  examples:
  - value: 15 degree Celsius
  keywords:
  - surface
  - temperature
  slot_uri: MIXS:0000125
  range: string
  recommended: true
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
suspend_part_matter:
  annotations:
    Preferred_unit: milligram per liter
  description: Concentration of suspended particulate matter
  title: suspended particulate matter
  examples:
  - value: 0.5 milligram per liter
  keywords:
  - particle
  - particulate
  - suspended
  slot_uri: MIXS:0000741
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
suspend_solids:
  annotations:
    Expected_value: suspended solid name;measurement value
    Preferred_unit: gram, microgram, milligram per liter, mole per liter, gram per
      liter, part per million
  description: Concentration of substances including a wide variety of material, such
    as silt, decaying plant and animal matter; can include multiple substances
  title: suspended solids
  keywords:
  - solids
  - suspended
  string_serialization: '{text};{float} {unit}'
  slot_uri: MIXS:0000150
  multivalued: true
sym_life_cycle_type:
  annotations:
    Expected_value: type of life cycle of the symbiotic organism (host of the samples)
  description: Type of life cycle of the symbiotic host species (the thing being sampled).
    Simple life cycles occur within a single host, complex ones within multiple different
    hosts over the course of their normal life cycle
  title: symbiotic host organism life cycle type
  examples:
  - value: complex life cycle
  keywords:
  - host
  - host.
  - life
  - organism
  - symbiosis
  - type
  slot_uri: MIXS:0001300
  range: SymLifeCycleTypeEnum
  required: true
symbiont_host_role:
  description: Role of the host in the life cycle of the symbiotic organism
  title: host of the symbiont role
  examples:
  - value: intermediate
  keywords:
  - host
  - host.
  - symbiosis
  slot_uri: MIXS:0001303
  range: SymbiontHostRoleEnum
  recommended: true
tan:
  annotations:
    Preferred_unit: milligram per liter
  description: 'Total Acid Number  (TAN) is a measurement of acidity that is determined
    by the amount of  potassium hydroxide  in milligrams that is needed to neutralize
    the acids in one gram of oil.  It is an important quality measurement of  crude
    oil. (source: https://en.wikipedia.org/wiki/Total_acid_number)'
  title: total acid number
  keywords:
  - number
  - total
  slot_uri: MIXS:0000120
  range: string
  recommended: true
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
target_gene:
  description: Targeted gene or locus name for marker gene studies
  title: target gene
  examples:
  - value: 16S rRNA, 18S rRNA, nif, amoA, rpo
  in_subset:
  - sequencing
  keywords:
  - target
  slot_uri: MIXS:0000044
  range: string
target_subfragment:
  description: Name of subfragment of a gene or locus. Important to e.g. identify
    special regions on marker genes like V6 on 16S rRNA
  title: target subfragment
  examples:
  - value: V6, V9, ITS
  in_subset:
  - sequencing
  keywords:
  - target
  slot_uri: MIXS:0000045
  range: string
tax_class:
  description: Method used for taxonomic classification, along with reference database
    used, classification rank, and thresholds used to classify new genomes
  title: taxonomic classification
  examples:
  - value: vConTACT vContact2 (references from NCBI RefSeq v83, genus rank classification,
      default parameters)
  in_subset:
  - sequencing
  keywords:
  - classification
  - taxon
  slot_uri: MIXS:0000064
  range: string
tax_ident:
  description: The phylogenetic marker(s) used to assign an organism name to the SAG
    or MAG
  title: taxonomic identity marker
  examples:
  - value: other
    description: was other <colon> rpoB gene
  in_subset:
  - sequencing
  keywords:
  - identifier
  - marker
  - taxon
  slot_uri: MIXS:0000053
  range: TaxIdentEnum
temp:
  annotations:
    Preferred_unit: degree Celsius
  description: Temperature of the sample at the time of sampling
  title: temperature
  examples:
  - value: 25 degree Celsius
  in_subset:
  - environment
  keywords:
  - temperature
  slot_uri: MIXS:0000113
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
temp_out:
  annotations:
    Preferred_unit: degree Celsius
  description: The recorded temperature value at sampling time outside
  title: temperature outside house
  examples:
  - value: 5 degree Celsius
  keywords:
  - house
  - temperature
  slot_uri: MIXS:0000197
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
tertiary_treatment:
  annotations:
    Expected_value: tertiary treatment type
  description: The process providing a final treatment stage to raise the effluent
    quality before it is discharged to the receiving environment
  title: tertiary treatment
  keywords:
  - treatment
  string_serialization: '{text}'
  slot_uri: MIXS:0000352
tidal_stage:
  description: Stage of tide
  title: tidal stage
  examples:
  - value: high tide
  slot_uri: MIXS:0000750
  range: TidalStageEnum
tillage:
  description: Note method(s) used for tilling
  title: history/tillage
  examples:
  - value: chisel
  keywords:
  - history
  slot_uri: MIXS:0001081
  multivalued: true
  range: TillageEnum
time_last_toothbrush:
  description: Specification of the time since last toothbrushing
  title: time since last toothbrushing
  comments:
  - P2H45M does not match ^P(?!$)(\\d+Y)?(\\d+M)?(\\d+W)?(\\d+D)?(T(?=\\d+[HMS])(\\d+H)?(\\d+M)?(\\d+S)?)?$
  - problematic ISO 8601 period validation
  examples:
  - value: PT2H45M
  keywords:
  - time
  slot_uri: MIXS:0000924
  range: string
  pattern: ^P(?:(?:\d+D|\d+M(?:\d+D)?|\d+Y(?:\d+M(?:\d+D)?)?)(?:T(?:\d+H(?:\d+M(?:\d+S)?)?|\d+M(?:\d+S)?|\d+S))?|T(?:\d+H(?:\d+M(?:\d+S)?)?|\d+M(?:\d+S)?|\d+S)|\d+W)$
  structured_pattern:
    syntax: ^{duration}$
    interpolated: true
    partial_match: true
time_since_last_wash:
  description: Specification of the time since last wash
  title: time since last wash
  examples:
  - value: P1D
  keywords:
  - time
  slot_uri: MIXS:0000943
  range: string
  pattern: ^P(?:(?:\d+D|\d+M(?:\d+D)?|\d+Y(?:\d+M(?:\d+D)?)?)(?:T(?:\d+H(?:\d+M(?:\d+S)?)?|\d+M(?:\d+S)?|\d+S))?|T(?:\d+H(?:\d+M(?:\d+S)?)?|\d+M(?:\d+S)?|\d+S)|\d+W)$
  structured_pattern:
    syntax: ^{duration}$
    interpolated: true
    partial_match: true
timepoint:
  annotations:
    Preferred_unit: hours or days
  description: Time point at which a sample or observation is made or taken from a
    biomaterial as measured from some reference point. Indicate the timepoint written
    in ISO 8601 format
  title: timepoint
  examples:
  - value: PT24H
  keywords:
  - time
  slot_uri: MIXS:0001173
  range: string
  pattern: ^P(?:(?:\d+D|\d+M(?:\d+D)?|\d+Y(?:\d+M(?:\d+D)?)?)(?:T(?:\d+H(?:\d+M(?:\d+S)?)?|\d+M(?:\d+S)?|\d+S))?|T(?:\d+H(?:\d+M(?:\d+S)?)?|\d+M(?:\d+S)?|\d+S)|\d+W)$
  structured_pattern:
    syntax: ^{duration}$
    interpolated: true
    partial_match: true
tiss_cult_growth_med:
  description: Description of plant tissue culture growth media used
  title: tissue culture growth media
  examples:
  - value: https://link.springer.com/content/pdf/10.1007/BF02796489.pdf
  keywords:
  - culture
  - growth
  slot_uri: MIXS:0001070
  range: string
  pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$|([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{PMID}|{DOI}|{URL}|{text}$
    interpolated: true
    partial_match: true
toluene:
  annotations:
    Preferred_unit: milligram per liter, parts per million
  description: Concentration of toluene in the sample
  title: toluene
  slot_uri: MIXS:0000154
  range: string
  recommended: true
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
tot_carb:
  description: Total carbon content
  title: total carbon
  keywords:
  - carbon
  - total
  slot_uri: MIXS:0000525
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
tot_depth_water_col:
  annotations:
    Preferred_unit: meter
  description: Measurement of total depth of water column
  title: total depth of water column
  examples:
  - value: 500 meter
  keywords:
  - depth
  - total
  - water
  slot_uri: MIXS:0000634
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
tot_diss_nitro:
  annotations:
    Preferred_unit: microgram per liter
  description: 'Total dissolved nitrogen concentration, reported as nitrogen, measured
    by: total dissolved nitrogen = NH4 + NO3NO2 + dissolved organic nitrogen'
  title: total dissolved nitrogen
  examples:
  - value: 40 microgram per liter
  keywords:
  - dissolved
  - nitrogen
  - total
  slot_uri: MIXS:0000744
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
tot_inorg_nitro:
  annotations:
    Preferred_unit: microgram per liter
  description: Total inorganic nitrogen content
  title: total inorganic nitrogen
  examples:
  - value: 40 microgram per liter
  keywords:
  - inorganic
  - nitrogen
  - total
  slot_uri: MIXS:0000745
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
tot_iron:
  annotations:
    Preferred_unit: milligram per liter, milligram per kilogram
  description: Concentration of total iron in the sample
  title: total iron
  keywords:
  - total
  slot_uri: MIXS:0000105
  range: string
  recommended: true
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
tot_nitro:
  annotations:
    Preferred_unit: microgram per liter, micromole per liter, milligram per liter
  description: 'Total nitrogen concentration of water samples, calculated by: total
    nitrogen = total dissolved nitrogen + particulate nitrogen. Can also be measured
    without filtering, reported as nitrogen'
  title: total nitrogen concentration
  examples:
  - value: 50 micromole per liter
  keywords:
  - concentration
  - nitrogen
  - total
  slot_uri: MIXS:0000102
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
tot_nitro_cont_meth:
  description: Reference or method used in determining the total nitrogen
  title: total nitrogen content method
  examples:
  - value: https://currentprotocols.onlinelibrary.wiley.com/doi/abs/10.1002/0471142913.fab0102s00
  keywords:
  - content
  - method
  - nitrogen
  - total
  slot_uri: MIXS:0000338
  range: string
  pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$$
  structured_pattern:
    syntax: ^{PMID}|{DOI}|{URL}$
    interpolated: true
    partial_match: true
tot_nitro_content:
  description: Total nitrogen content of the sample
  title: total nitrogen content
  examples:
  - value: 35 milligrams Nitrogen per kilogram of soil
  keywords:
  - content
  - nitrogen
  - total
  slot_uri: MIXS:0000530
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
tot_org_c_meth:
  description: Reference or method used in determining total organic carbon
  title: total organic carbon method
  examples:
  - value: https://www.epa.gov/sites/production/files/2015-12/documents/9060a.pdf
  keywords:
  - carbon
  - method
  - organic
  - total
  slot_uri: MIXS:0000337
  range: string
  pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$$
  structured_pattern:
    syntax: ^{PMID}|{DOI}|{URL}$
    interpolated: true
    partial_match: true
tot_org_carb:
  annotations:
    Preferred_unit: gram Carbon per kilogram sample material
  description: Total organic carbon content
  title: total organic carbon
  examples:
  - value: '0.02'
  keywords:
  - carbon
  - organic
  - total
  slot_uri: MIXS:0000533
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
tot_part_carb:
  annotations:
    Preferred_unit: microgram per liter, micromole per liter
  description: Total particulate carbon content
  title: total particulate carbon
  examples:
  - value: 35 micromole per liter
  keywords:
  - carbon
  - particle
  - particulate
  - total
  slot_uri: MIXS:0000747
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
tot_phosp:
  annotations:
    Preferred_unit: micromole per liter, milligram per liter, parts per million
  description: 'Total phosphorus concentration in the sample, calculated by: total
    phosphorus = total dissolved phosphorus + particulate phosphorus'
  title: total phosphorus
  examples:
  - value: 0.03 milligram per liter
  keywords:
  - phosphorus
  - total
  slot_uri: MIXS:0000117
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
tot_phosphate:
  annotations:
    Preferred_unit: microgram per liter, micromole per liter
  description: Total amount or concentration of phosphate
  title: total phosphate
  keywords:
  - phosphate
  - total
  slot_uri: MIXS:0000689
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
tot_sulfur:
  annotations:
    Preferred_unit: milligram per liter, parts per million
  description: Concentration of total sulfur in the sample
  title: total sulfur
  keywords:
  - sulfur
  - total
  slot_uri: MIXS:0000419
  range: string
  recommended: true
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
train_line:
  description: The subway line name
  title: train line
  examples:
  - value: red
  keywords:
  - train
  slot_uri: MIXS:0000837
  range: TrainLineEnum
train_stat_loc:
  description: The train station collection location
  title: train station collection location
  examples:
  - value: forest hills
  keywords:
  - location
  - train
  slot_uri: MIXS:0000838
  range: TrainStatLocEnum
train_stop_loc:
  description: The train stop collection location
  title: train stop collection location
  examples:
  - value: end
  keywords:
  - location
  - stop
  - train
  slot_uri: MIXS:0000839
  range: TrainStopLocEnum
travel_out_six_month:
  annotations:
    Expected_value: country name
  description: Specification of the countries travelled in the last six months; can
    include multiple travels
  title: travel outside the country in last six months
  keywords:
  - months
  string_serialization: '{text}'
  slot_uri: MIXS:0000268
  multivalued: true
trna_ext_software:
  description: Tools used for tRNA identification
  title: tRNA extraction software
  examples:
  - value: infernal;v2;default parameters
  in_subset:
  - sequencing
  keywords:
  - software
  slot_uri: MIXS:0000068
  range: string
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+);([^\s-]{1,2}|[^\s-]+.+[^\s-]+);([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{software};{version};{parameters}$
    interpolated: true
    partial_match: true
trnas:
  annotations:
    Expected_value: value from 0-21
  description: The total number of tRNAs identified from the SAG or MAG
  title: number of standard tRNAs extracted
  examples:
  - value: '18'
  in_subset:
  - sequencing
  keywords:
  - number
  string_serialization: '{integer}'
  slot_uri: MIXS:0000067
trophic_level:
  description: Trophic levels are the feeding position in a food chain. Microbes can
    be a range of producers (e.g. chemolithotroph)
  title: trophic level
  examples:
  - value: heterotroph
  in_subset:
  - nucleic acid sequence source
  keywords:
  - level
  slot_uri: MIXS:0000032
  range: TrophicLevelEnum
turbidity:
  description: Measure of the amount of cloudiness or haziness in water caused by
    individual particles
  title: turbidity
  examples:
  - value: 0.3 nephelometric turbidity units
  slot_uri: MIXS:0000191
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
tvdss_of_hcr_press:
  annotations:
    Preferred_unit: meter
  description: True vertical depth subsea (TVDSS) of the hydrocarbon resource where
    the original pressure was measured (e.g. 1578 m)
  title: depth (TVDSS) of hydrocarbon resource pressure
  keywords:
  - depth
  - hydrocarbon
  - pressure
  - resource
  slot_uri: MIXS:0000397
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
tvdss_of_hcr_temp:
  annotations:
    Preferred_unit: meter
  description: True vertical depth subsea (TVDSS) of the hydrocarbon resource where
    the original temperature was measured (e.g. 1345 m)
  title: depth (TVDSS) of hydrocarbon resource temperature
  keywords:
  - depth
  - hydrocarbon
  - resource
  - temperature
  slot_uri: MIXS:0000394
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
twin_sibling:
  description: Specification of twin sibling presence
  title: twin sibling presence
  examples:
  - value: 'yes'
  keywords:
  - presence
  slot_uri: MIXS:0000326
  range: boolean
typ_occup_density:
  description: Customary or normal density of occupants
  title: typical occupant density
  examples:
  - value: '25'
  keywords:
  - density
  slot_uri: MIXS:0000771
  range: float
  required: true
type_of_symbiosis:
  description: Type of biological interaction established between the symbiotic host
    organism being sampled and its respective host
  title: type of symbiosis
  examples:
  - value: parasitic
  keywords:
  - symbiosis
  - type
  slot_uri: MIXS:0001307
  range: TypeOfSymbiosisEnum
  recommended: true
urine_collect_meth:
  description: Specification of urine collection method
  title: urine/collection method
  examples:
  - value: catheter
  keywords:
  - method
  slot_uri: MIXS:0000899
  range: UrineCollectMethEnum
urobiom_sex:
  annotations:
    Expected_value: sex of the symbiotic organism (host of the samples); enumeration
  description: Physical sex of the host
  title: host sex
  keywords:
  - host
  - host.
  slot_uri: MIXS:0000862
  range: UrobiomSexEnum
urogenit_disord:
  description: History of urogenital disorders, can include multiple disorders. The
    terms should be chosen from the DO (Human Disease Ontology) at http://www.disease-ontology.org,
    reproductive system disease (https://disease-ontology.org/?id=DOID:15) or urinary
    system disease (https://disease-ontology.org/?id=DOID:18)
  title: urogenital disorder
  keywords:
  - disorder
  slot_uri: MIXS:0000289
  multivalued: true
  range: string
urogenit_tract_disor:
  description: History of urogenital tract disorders; can include multiple disorders.
    The terms should be chosen from the DO (Human Disease Ontology) at http://www.disease-ontology.org,
    urinary system disease (https://disease-ontology.org/?id=DOID:18)
  title: urine/urogenital tract disorder
  keywords:
  - disorder
  slot_uri: MIXS:0000278
  multivalued: true
  range: string
ventilation_rate:
  annotations:
    Preferred_unit: cubic meter per minute, liters per second
  description: Ventilation rate of the system in the sampled premises
  title: ventilation rate
  examples:
  - value: 750 cubic meter per minute
  keywords:
  - rate
  slot_uri: MIXS:0000114
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
ventilation_type:
  annotations:
    Expected_value: ventilation type name
  description: Ventilation system used in the sampled premises
  title: ventilation type
  examples:
  - value: Operable windows
  keywords:
  - type
  string_serialization: '{text}'
  slot_uri: MIXS:0000756
  multivalued: true
vfa:
  annotations:
    Preferred_unit: milligram per liter, parts per million
  description: Concentration of Volatile Fatty Acids in the sample
  title: volatile fatty acids
  slot_uri: MIXS:0000152
  range: string
  recommended: true
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
vfa_fw:
  annotations:
    Preferred_unit: milligram per liter
  description: Original volatile fatty acid concentration in the hydrocarbon resource
  title: vfa in formation water
  keywords:
  - water
  slot_uri: MIXS:0000408
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
vir_ident_software:
  annotations:
    Expected_value: software name, version and relevant parameters
  description: Tool(s) used for the identification of UViG as a viral genome, software
    or protocol name including version number, parameters, and cutoffs used
  title: viral identification software
  examples:
  - value: VirSorter; 1.0.4; Virome database, category 2
  in_subset:
  - sequencing
  keywords:
  - identifier
  - software
  string_serialization: '{software};{version};{parameters}'
  slot_uri: MIXS:0000081
virus_enrich_appr:
  description: List of approaches used to enrich the sample for viruses, if any
  title: virus enrichment approach
  examples:
  - value: filtration
    description: was filtration + FeCl Precipitation + ultracentrifugation + DNAse
  - value: FeCl Precipitation
    description: was filtration + FeCl Precipitation + ultracentrifugation + DNAse
  - value: ultracentrifugation
    description: was filtration + FeCl Precipitation + ultracentrifugation + DNAse
  - value: DNAse
    description: was filtration + FeCl Precipitation + ultracentrifugation + DNAse
  in_subset:
  - nucleic acid sequence source
  keywords:
  - enrichment
  slot_uri: MIXS:0000036
  range: VirusEnrichApprEnum
vis_media:
  annotations:
    Expected_value: enumeration
  description: The building visual media
  title: visual media
  examples:
  - value: 3D scans
  string_serialization: '[photos|videos|commonly of the building|site context (adjacent
    buildings, vegetation, terrain, streets)|interiors|equipment|3D scans]'
  slot_uri: MIXS:0000840
viscosity:
  annotations:
    Expected_value: measurement value;measurement value
    Preferred_unit: cP at degree Celsius
  description: A measure of oil's resistance  to gradual deformation by  shear stress  or  tensile
    stress (e.g. 3.5 cp; 100   C)
  title: viscosity
  string_serialization: '{float} {unit};{float} {unit}'
  slot_uri: MIXS:0000126
volatile_org_comp:
  annotations:
    Expected_value: volatile organic compound name;measurement value
    Preferred_unit: microgram per cubic meter, parts per million, nanogram per liter
  description: Concentration of carbon-based chemicals that easily evaporate at room
    temperature; can report multiple volatile organic compounds by entering numeric
    values preceded by name of compound
  title: volatile organic compounds
  examples:
  - value: formaldehyde;500 nanogram per liter
  keywords:
  - organic
  string_serialization: '{text};{float} {unit}'
  slot_uri: MIXS:0000115
  multivalued: true
wall_area:
  annotations:
    Preferred_unit: square meter
  description: The total area of the sampled room's walls
  title: wall area
  keywords:
  - area
  - wall
  slot_uri: MIXS:0000198
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
wall_const_type:
  description: The building class of the wall defined by the composition of the building
    elements and fire-resistance rating
  title: wall construction type
  examples:
  - value: fire resistive
  keywords:
  - type
  - wall
  slot_uri: MIXS:0000841
  range: WallConstTypeEnum
wall_finish_mat:
  description: The material utilized to finish the outer most layer of the wall
  title: wall finish material
  examples:
  - value: wood
  keywords:
  - material
  - wall
  slot_uri: MIXS:0000842
  range: WallFinishMatEnum
wall_height:
  annotations:
    Preferred_unit: centimeter
  description: The average height of the walls in the sampled room
  title: wall height
  keywords:
  - height
  - wall
  slot_uri: MIXS:0000221
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
wall_loc:
  description: The relative location of the wall within the room
  title: wall location
  examples:
  - value: north
  keywords:
  - location
  - wall
  slot_uri: MIXS:0000843
  range: CompassDirections8Enum
wall_surf_treatment:
  description: The surface treatment of interior wall
  title: wall surface treatment
  examples:
  - value: paneling
  keywords:
  - surface
  - treatment
  - wall
  slot_uri: MIXS:0000845
  range: WallSurfTreatmentEnum
wall_texture:
  description: The feel, appearance, or consistency of a wall surface
  title: wall texture
  examples:
  - value: popcorn
  keywords:
  - texture
  - wall
  slot_uri: MIXS:0000846
  range: CeilingWallTextureEnum
wall_thermal_mass:
  annotations:
    Preferred_unit: joule per degree Celsius
  description: The ability of the wall to provide inertia against temperature fluctuations.
    Generally this means concrete or concrete block that is either exposed or covered
    only with paint
  title: wall thermal mass
  keywords:
  - mass
  - wall
  slot_uri: MIXS:0000222
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
wall_water_mold:
  description: Signs of the presence of mold or mildew on a wall
  title: wall signs of water/mold
  examples:
  - value: no presence of mold visible
  keywords:
  - wall
  slot_uri: MIXS:0000844
  range: MoldVisibilityEnum
wastewater_type:
  annotations:
    Expected_value: wastewater type name
  description: The origin of wastewater such as human waste, rainfall, storm drains,
    etc
  title: wastewater type
  keywords:
  - type
  string_serialization: '{text}'
  slot_uri: MIXS:0000353
water_cont_soil_meth:
  description: Reference or method used in determining the water content of soil
  title: water content method
  keywords:
  - content
  - method
  - water
  slot_uri: MIXS:0000323
  range: string
  pattern: ^^PMID:\d+$|^doi:10.\d{2,9}/.*$|^https?:\/\/(?:www\.)?[-a-zA-Z0-9@:%._\+~#=]{1,256}\.[a-zA-Z0-9()]{1,6}\b(?:[-a-zA-Z0-9()@:%_\+.~#?&\/=]*)$$
  structured_pattern:
    syntax: ^{PMID}|{DOI}|{URL}$
    interpolated: true
    partial_match: true
water_content:
  annotations:
    Preferred_unit: gram per gram or cubic centimeter per cubic centimeter
  description: Water content measurement
  title: water content
  keywords:
  - content
  - water
  slot_uri: MIXS:0000185
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
water_current:
  annotations:
    Preferred_unit: cubic meter per second, knots
  description: Measurement of magnitude and direction of flow within a fluid
  title: water current
  examples:
  - value: 10 cubic meter per second
  keywords:
  - water
  slot_uri: MIXS:0000203
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
water_cut:
  annotations:
    Preferred_unit: percent
  description: Current amount of water (%) in a produced fluid stream; or the average
    of the combined streams
  title: water cut
  comments:
  - percent or float?
  examples:
  - value: 45%
  keywords:
  - water
  slot_uri: MIXS:0000454
  range: string
  required: true
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
water_feat_size:
  annotations:
    Preferred_unit: square meter
  description: The size of the water feature
  title: water feature size
  keywords:
  - feature
  - size
  - water
  slot_uri: MIXS:0000223
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
water_feat_type:
  description: The type of water feature present within the building being sampled
  title: water feature type
  examples:
  - value: stream
  keywords:
  - feature
  - type
  - water
  slot_uri: MIXS:0000847
  range: WaterFeatTypeEnum
water_frequency:
  annotations:
    Expected_value: rate
    Preferred_unit: per day, per week, per month
  description: Number of water delivery events within a given period of time
  title: water delivery frequency
  examples:
  - value: 2 per day
  keywords:
  - delivery
  - frequency
  - water
  string_serialization: '{float}{unit}'
  slot_uri: MIXS:0001174
water_pH:
  title: water pH
  examples:
  - value: '7.2'
  keywords:
  - ph
  - water
  slot_uri: MIXS:0001175
  range: float
water_prod_rate:
  annotations:
    Preferred_unit: cubic meter per day
  description: Water production rates per well (e.g. 987 m3 / day)
  title: water production rate
  keywords:
  - production
  - rate
  - water
  slot_uri: MIXS:0000453
  range: string
  recommended: true
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
water_source_adjac:
  annotations:
    Expected_value: ENVO_01001110 or ENVO_00000070
  description: Description of the environmental features that are adjacent to the
    farm water source. This field accepts terms under ecosystem (http://purl.obolibrary.org/obo/ENVO_01001110)
    and human construction (http://purl.obolibrary.org/obo/ENVO_00000070). Multiple
    terms can be separated by pipes
  title: environmental feature adjacent water source
  examples:
  - value: feedlot [ENVO:01000627]
  keywords:
  - adjacent
  - environmental
  - feature
  - source
  - water
  string_serialization: '{text}'
  slot_uri: MIXS:0001122
  multivalued: true
water_source_shared:
  annotations:
    Expected_value: enumeration
  description: Other users sharing access to the same water source. Multiple terms
    can be separated by one or more pipes
  title: water source shared
  examples:
  - value: no sharing
  keywords:
  - source
  - water
  string_serialization: '[multiple users, agricutural|multiple users, other|no sharing]'
  slot_uri: MIXS:0001176
  multivalued: true
water_temp_regm:
  annotations:
    Preferred_unit: degree Celsius
  description: Information about treatment involving an exposure to water with varying
    degree of temperature, treatment regimen including how many times the treatment
    was repeated, how long each treatment lasted, and the start and end time of the
    entire treatment; can include multiple regimens
  title: water temperature regimen
  examples:
  - value: 15 degree Celsius;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M
  keywords:
  - regimen
  - temperature
  - water
  slot_uri: MIXS:0000590
  multivalued: true
  range: string
watering_regm:
  annotations:
    Preferred_unit: milliliter, liter
  description: Information about treatment involving an exposure to watering frequencies,
    treatment regimen including how many times the treatment was repeated, how long
    each treatment lasted, and the start and end time of the entire treatment; can
    include multiple regimens
  title: watering regimen
  examples:
  - value: 1 liter;R2/2018-05-11T14:30/2018-05-11T19:30/P1H30M
  keywords:
  - regimen
  - water
  slot_uri: MIXS:0000591
  multivalued: true
  range: string
weekday:
  description: The day of the week when sampling occurred
  title: weekday
  examples:
  - value: Sunday
  slot_uri: MIXS:0000848
  range: WeekdayEnum
weight_loss_3_month:
  annotations:
    Expected_value: weight loss specification;measurement value
    Preferred_unit: kilogram, gram
  description: Specification of weight loss in the last three months, if yes should
    be further specified to include amount of weight loss
  title: weight loss in last three months
  examples:
  - value: yes;5 kilogram
  keywords:
  - months
  - weight
  string_serialization: '{boolean};{float} {unit}'
  slot_uri: MIXS:0000295
wga_amp_appr:
  description: Method used to amplify genomic DNA in preparation for sequencing
  title: WGA amplification approach
  examples:
  - value: mda based
  in_subset:
  - sequencing
  slot_uri: MIXS:0000055
  range: WgaAmpApprEnum
wga_amp_kit:
  annotations:
    Expected_value: kit name
  description: Kit used to amplify genomic DNA in preparation for sequencing
  title: WGA amplification kit
  examples:
  - value: qiagen repli-g
  in_subset:
  - sequencing
  keywords:
  - kit
  string_serialization: '{text}'
  slot_uri: MIXS:0000006
win:
  description: 'A unique identifier of a well or wellbore. This is part of the Global
    Framework for Well Identification initiative which is compiled by the Professional
    Petroleum Data Management Association (PPDM) in an effort to improve well identification
    systems. (Supporting information: https://ppdm.org/ and http://dl.ppdm.org/dl/690)'
  title: well identification number
  keywords:
  - identifier
  - number
  slot_uri: MIXS:0000297
  range: string
  recommended: true
wind_direction:
  annotations:
    Preferred_unit: degrees or cardinal direction
  description: Wind direction is the direction from which a wind originates
  title: wind direction
  keywords:
  - direction
  - wind
  slot_uri: MIXS:0000757
  range: string
wind_speed:
  description: speed of wind measured at the time of sampling
  title: wind speed
  keywords:
  - speed
  - wind
  slot_uri: MIXS:0000118
  range: string
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true
window_cond:
  description: The physical condition of the window at the time of sampling
  title: window condition
  examples:
  - value: rupture
  keywords:
  - condition
  - window
  slot_uri: MIXS:0000849
  range: DamagedRupturedEnum
window_cover:
  description: The type of window covering
  title: window covering
  examples:
  - value: curtains
  keywords:
  - window
  slot_uri: MIXS:0000850
  range: WindowCoverEnum
window_horiz_pos:
  description: The horizontal position of the window on the wall
  title: window horizontal position
  examples:
  - value: middle
  keywords:
  - window
  slot_uri: MIXS:0000851
  range: WindowHorizPosEnum
window_loc:
  description: The relative location of the window within the room
  title: window location
  examples:
  - value: west
  keywords:
  - location
  - window
  slot_uri: MIXS:0000852
  range: CompassDirections8Enum
window_mat:
  description: The type of material used to finish a window
  title: window material
  examples:
  - value: wood
  keywords:
  - material
  - window
  slot_uri: MIXS:0000853
  range: WindowMatEnum
window_open_freq:
  description: The number of times windows are opened per week
  title: window open frequency
  keywords:
  - frequency
  - window
  slot_uri: MIXS:0000246
  range: integer
window_size:
  annotations:
    Expected_value: measurement value
    Preferred_unit: inch, meter
  description: The window's length and width
  title: window area/size
  keywords:
  - window
  string_serialization: '{float} {unit} x {float} {unit}'
  slot_uri: MIXS:0000224
window_status:
  description: Defines whether the windows were open or closed during environmental
    testing
  title: window status
  examples:
  - value: open
  keywords:
  - status
  - window
  slot_uri: MIXS:0000855
  range: WindowStatusEnum
window_type:
  description: The type of windows
  title: window type
  examples:
  - value: fixed window
  keywords:
  - type
  - window
  slot_uri: MIXS:0000856
  range: WindowTypeEnum
window_vert_pos:
  description: The vertical position of the window on the wall
  title: window vertical position
  examples:
  - value: middle
  keywords:
  - window
  slot_uri: MIXS:0000857
  range: WindowVertPosEnum
window_water_mold:
  description: Signs of the presence of mold or mildew on the window
  title: window signs of water/mold
  examples:
  - value: no presence of mold visible
  keywords:
  - window
  slot_uri: MIXS:0000854
  range: MoldVisibilityEnum
x16s_recover:
  description: Can a 16S gene be recovered from the submitted SAG or MAG?
  title: 16S recovered
  examples:
  - value: 'yes'
  in_subset:
  - sequencing
  keywords:
  - recover
  slot_uri: MIXS:0000065
  range: boolean
x16s_recover_software:
  description: Tools used for 16S rRNA gene extraction
  title: 16S recovery software
  examples:
  - value: rambl;v2;default parameters
  in_subset:
  - sequencing
  keywords:
  - recover
  - software
  slot_uri: MIXS:0000066
  range: string
  pattern: ^([^\s-]{1,2}|[^\s-]+.+[^\s-]+);([^\s-]{1,2}|[^\s-]+.+[^\s-]+);([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{software};{version};{parameters}$
    interpolated: true
    partial_match: true
xylene:
  annotations:
    Preferred_unit: milligram per liter, parts per million
  description: Concentration of xylene in the sample
  title: xylene
  slot_uri: MIXS:0000156
  range: string
  recommended: true
  pattern: ^[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?( *- *[-+]?[0-9]*\.?[0-9]+(?:[eE][-+]?[0-9]+)?)?
    *([^\s-]{1,2}|[^\s-]+.+[^\s-]+)$
  structured_pattern:
    syntax: ^{scientific_float}( *- *{scientific_float})? *{text}$
    interpolated: true
    partial_match: true