This repository has been archived by the owner on Jul 16, 2020. It is now read-only.
-
Notifications
You must be signed in to change notification settings - Fork 0
/
tmp.dat
107 lines (107 loc) · 5.58 KB
/
tmp.dat
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
External loop : 0
Interior loop ( 1,330) GC; ( 2,329) GC: -330
Interior loop ( 2,329) GC; ( 3,328) CG: -340
Interior loop ( 3,328) CG; ( 4,327) GC: -240
Interior loop ( 4,327) GC; ( 5,326) GC: -330
Interior loop ( 5,326) GC; ( 6,325) CG: -340
Interior loop ( 6,325) CG; ( 7,324) GC: -240
Interior loop ( 7,324) GC; ( 8,323) CG: -340
Interior loop ( 8,323) CG; ( 9,322) CG: -330
Interior loop ( 9,322) CG; ( 10,321) GC: -240
Interior loop ( 10,321) GC; ( 11,320) GC: -330
Interior loop ( 11,320) GC; ( 12,319) CG: -340
Interior loop ( 12,319) CG; ( 13,318) CG: -330
Interior loop ( 13,318) CG; ( 14,296) GC: 571
Interior loop ( 14,296) GC; ( 15,295) GC: -330
Interior loop ( 15,295) GC; ( 16,294) CG: -340
Interior loop ( 16,294) CG; ( 17,293) GC: -240
Interior loop ( 17,293) GC; ( 18,292) GC: -330
Interior loop ( 18,292) GC; ( 19,291) CG: -340
Interior loop ( 20, 48) CG; ( 21, 47) CG: -330
Interior loop ( 21, 47) CG; ( 23, 45) CG: 40
Interior loop ( 23, 45) CG; ( 24, 44) GU: -140
Interior loop ( 24, 44) GU; ( 25, 43) GC: -210
Interior loop ( 25, 43) GC; ( 26, 42) CG: -340
Interior loop ( 26, 42) CG; ( 27, 41) CG: -330
Interior loop ( 27, 41) CG; ( 28, 40) CG: -330
Interior loop ( 28, 40) CG; ( 29, 39) CG: -330
Interior loop ( 29, 39) CG; ( 30, 38) CG: -330
Interior loop ( 30, 38) CG; ( 31, 37) CG: -330
Hairpin loop ( 31, 37) CG : 410
Interior loop ( 59,232) CG; ( 60,231) UA: -210
Interior loop ( 60,231) UA; ( 61,230) CG: -240
Interior loop ( 61,230) CG; ( 62,229) CG: -330
Interior loop ( 62,229) CG; ( 71,228) GC: 470
Interior loop ( 71,228) GC; ( 72,227) CG: -340
Interior loop ( 72,227) CG; ( 73,226) CG: -330
Interior loop ( 73,226) CG; ( 74,225) GC: -240
Interior loop ( 74,225) GC; ( 75,224) GC: -330
Interior loop ( 76, 89) GC; ( 77, 88) CG: -340
Interior loop ( 77, 88) CG; ( 78, 87) CG: -330
Interior loop ( 78, 87) CG; ( 79, 86) CG: -330
Interior loop ( 79, 86) CG; ( 80, 85) CG: -330
Hairpin loop ( 80, 85) CG : 40
Interior loop ( 90,104) AU; ( 91,103) CG: -220
Interior loop ( 91,103) CG; ( 92,102) GC: -240
Interior loop ( 92,102) GC; ( 93,101) GC: -330
Interior loop ( 93,101) GC; ( 94,100) GC: -330
Interior loop ( 94,100) GC; ( 95, 99) UA: -220
Hairpin loop ( 95, 99) UA : 620
Interior loop (105,223) GC; (106,222) GC: -330
Interior loop (106,222) GC; (110,220) CG: 270
Interior loop (110,220) CG; (111,219) GC: -240
Interior loop (111,219) GC; (112,218) GC: -330
Interior loop (112,218) GC; (113,217) CG: -340
Interior loop (113,217) CG; (115,216) CG: 50
Interior loop (115,216) CG; (117,215) GC: 140
Interior loop (117,215) GC; (122,210) GU: 300
Interior loop (122,210) GU; (124,209) CG: 130
Interior loop (124,209) CG; (126,208) CG: 50
Interior loop (126,208) CG; (127,207) GC: -240
Interior loop (127,207) GC; (128,205) GU: 230
Interior loop (128,205) GU; (129,203) CG: 130
Interior loop (129,203) CG; (130,202) CG: -330
Interior loop (130,202) CG; (131,201) CG: -330
Interior loop (131,201) CG; (132,200) CG: -330
Interior loop (132,200) CG; (133,199) GC: -240
Interior loop (133,199) GC; (134,198) GC: -330
Interior loop (134,198) GC; (135,197) GC: -330
Interior loop (135,197) GC; (136,196) GC: -330
Interior loop (136,196) GC; (139,193) UG: 60
Interior loop (139,193) UG; (141,191) UA: -40
Interior loop (141,191) UA; (142,190) CG: -240
Interior loop (142,190) CG; (149,188) GC: 360
Interior loop (149,188) GC; (150,187) CG: -340
Interior loop (150,187) CG; (151,186) GC: -240
Interior loop (151,186) GC; (152,185) GC: -330
Interior loop (152,185) GC; (154,183) UA: 110
Interior loop (154,183) UA; (156,181) GC: 110
Interior loop (156,181) GC; (157,178) GC: 280
Interior loop (157,178) GC; (158,177) CG: -340
Interior loop (158,177) CG; (159,176) CG: -330
Interior loop (159,176) CG; (160,175) GC: -240
Interior loop (160,175) GC; (161,174) CG: -340
Interior loop (161,174) CG; (162,173) CG: -330
Interior loop (162,173) CG; (163,172) CG: -330
Interior loop (163,172) CG; (164,171) UA: -210
Interior loop (164,171) UA; (165,170) GC: -210
Hairpin loop (165,170) GC : 70
Multi loop ( 75,224) GC : 40
Interior loop (234,281) AU; (236,278) GC: 140
Interior loop (236,278) GC; (237,277) GC: -330
Interior loop (237,277) GC; (238,272) CG: 360
Interior loop (238,272) CG; (239,271) CG: -330
Interior loop (239,271) CG; (240,270) CG: -330
Interior loop (240,270) CG; (241,269) CG: -330
Interior loop (241,269) CG; (242,268) CG: -330
Interior loop (242,268) CG; (243,267) GC: -240
Interior loop (243,267) GC; (244,266) GC: -330
Interior loop (244,266) GC; (245,265) GC: -330
Interior loop (245,265) GC; (246,264) CG: -340
Interior loop (246,264) CG; (249,261) UG: -20
Interior loop (249,261) UG; (250,260) GC: -140
Interior loop (250,260) GC; (252,258) GC: -10
Hairpin loop (252,258) GC : 420
Multi loop ( 19,291) CG : 220
GGCGGCGCCGGCCGGCGGCCCACGGCCCCCCAGCCAGGGGGGCUGAGGAAACUCCGCCCUCCCCGCGGCGGCCGGGCCCCGCAAGGGGCACGGGUGAAACCCGUGGCAACGGCACAGAAACGACACGGCCCCGGGGCGUGUCGAGGACGCGGCUAGGCCGCCCUGGCAACAGGGCGGCAGCAAACCGCAGAGGAACCCCGGGGAUGCGGUGAAACGGCCGCCCCCGGCGGAGCAAGGCCCCCGGGCGGUGAGGGCCGCGCGAAGCCCGGGGGGAGACCGCUUAGCCCAAUGCCGCCGAAGUACAGAAGGCGGGUUAUGGCCGGCGCCGCC
(((((((((((((((((((((.(((((((((.....))))))))).))..........((((........((((((((((....)))))((((((...))))))((...((((.(.(....(.(.(((((((((((..(.((......((((.(.((((((((((....)))))))))..).).)))).)).)..)))))))).).))))....)))))).))))))))))).(.(((((((((((..((.(.....).))..)))))))))....))..).........)))))).....................))))))))))))) (-173.29)