JDK classes (org.w3c.dom.**) are relocated

[adrianbk]

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Shadow Version

com.github.johnrengelman:shadow:8.1.1

Gradle Version

Gradle 8.2
JVM: 17.0.3 (Azul Systems, Inc. 17.0.3+7-LTS)

Expected Behaviour

The contents of the relocated classes (deprecatedpain.org.apache.axis2.description.AxisService) should not contain relocated imports of JDK classes like org.w3c.dom.Document

Actual Behavior

The below imports are incorrectly relocated.

import deprecatedpain.org.w3c.dom.Document;
import deprecatedpain.org.w3c.dom.Element;
import deprecatedpain.org.w3c.dom.NamedNodeMap;
import deprecatedpain.org.w3c.dom.Node;
import deprecatedpain.org.w3c.dom.NodeList;

One suspicion is that the transitive dependency (jaxen:jaxen:1.1.6) has one class with a package name overlap: org.w3c.dom.UserDataHandler and that somehow causes relocation to consider everything under org.w3c.dom as relocated.

Though not reproduced in the below scripts, another observed example was import deprecatedpain.org.xml.sax.SAXException

Gradle Build Script(s)

The following can be used to reproduce: https://github.com/adrianbk/axis2-shadow

./gradlew soap-service:shadowJar the-monolith:compileJava the-monolith:runLoader

Content of Shadow JAR (jar tf <jar file> - post link to GIST if too long)

jar contents: https://gist.github.com/adrianbk/77f48e6f1b37416560dd42099d31e0f7