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HDF5. File accessibility. Unable to open file. #999

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hukai916 opened this issue Aug 24, 2021 · 1 comment
Closed

HDF5. File accessibility. Unable to open file. #999

hukai916 opened this issue Aug 24, 2021 · 1 comment

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@hukai916
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I know similar issues have been reported before. This time, this occurs in addBgdPeaks.

Some suggest that setting "threads = 1" may solve the problem as for createArrowFiles, however, there is no "threads" argument in addBgdPeaks function. The problem occurs sporadically and I can't reproduce the error.

What I have tried:

  1. rhdf5 version: rhdf5_2.36.0
  2. h5 file is not corrupted as indicated by h5ls(getArrowFiles(my_archrproject)[1])
  3. arrow file permissions are proper
@rcorces
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rcorces commented Aug 24, 2021

This has been an issue for a long time and still needs to be addressed.
See #248 for the original report and one potential solution.

@rcorces rcorces closed this as completed Aug 24, 2021
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@rcorces @hukai916